RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 SPANXA1Q9NS26 97 aa7.34□□□□□ -1.23
CCDC40-212ENST00000574799 A0A1W2PPR1 153 aa7.34□□□□□ -1.23
CCDC40-212ENST00000574799 NRACQ8N912 160 aa7.34□□□□□ -1.23
CCDC40-212ENST00000574799 RASL10AQ92737 203 aa7.34□□□□□ -1.23
CCDC40-212ENST00000574799 TMEM101Q96IK0 257 aa7.34□□□□□ -1.23
CCDC40-212ENST00000574799 DUX3Q96PT4 197 aa7.34□□□□□ -1.23
CCDC40-212ENST00000574799 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.34□□□□□ -1.24
CCDC40-212ENST00000574799 NHLRC4P0CG21 123 aaPredicted RBP7.34□□□□□ -1.24
CCDC40-212ENST00000574799 TOMM6Q96B49 74 aa7.34□□□□□ -1.24
CCDC40-212ENST00000574799 CREBBPQ92793 2442 aa7.33□□□□□ -1.24
CCDC40-212ENST00000574799 TRAV8-3A0A0A6YYJ7 113 aa7.33□□□□□ -1.24
CCDC40-212ENST00000574799 METTL26Q96S19 204 aa7.33□□□□□ -1.24
CCDC40-212ENST00000574799 FAM236AA0A1B0GUQ0 79 aa7.33□□□□□ -1.24
CCDC40-212ENST00000574799 FAM236BA0A1B0GV22 79 aa7.33□□□□□ -1.24
CCDC40-212ENST00000574799 ADARB2-AS1A8MUL3 147 aa7.33□□□□□ -1.24
CCDC40-212ENST00000574799 LINC01619G3V211 115 aa7.33□□□□□ -1.24
CCDC40-212ENST00000574799 CD7P09564 240 aa7.33□□□□□ -1.24
CCDC40-212ENST00000574799 FBXL19-AS1Q494R0 122 aa7.33□□□□□ -1.24
CCDC40-212ENST00000574799 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.33□□□□□ -1.24
CCDC40-212ENST00000574799 RNASE6Q93091 150 aaKnown RBP7.33□□□□□ -1.24
CCDC40-212ENST00000574799 CLEC19AQ6UXS0 136 aa7.33□□□□□ -1.24
CCDC40-212ENST00000574799 DPM3Q9P2X0 92 aa7.33□□□□□ -1.24
CCDC40-212ENST00000574799 PPP1R17O96001 155 aa7.32□□□□□ -1.24
CCDC40-212ENST00000574799 IGLV2-18A0A075B6J9 118 aa7.32□□□□□ -1.24
CCDC40-212ENST00000574799 M0QXV9 152 aa7.32□□□□□ -1.24
CCDC40-212ENST00000574799 RNASE4P34096 147 aaKnown RBP7.32□□□□□ -1.24
CCDC40-212ENST00000574799 NDPQ00604 133 aa7.32□□□□□ -1.24
CCDC40-212ENST00000574799 KLRB1Q12918 225 aa7.32□□□□□ -1.24
CCDC40-212ENST00000574799 MUSTN1Q8IVN3 82 aa7.32□□□□□ -1.24
CCDC40-212ENST00000574799 RPL39P62891 51 aaKnown RBP7.32□□□□□ -1.24
CCDC40-212ENST00000574799 LINC01560Q8TB33 94 aa7.32□□□□□ -1.24
CCDC40-212ENST00000574799 UBR5O95071 2799 aaPredicted RBP7.31□□□□□ -1.24
CCDC40-212ENST00000574799 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.31□□□□□ -1.24
CCDC40-212ENST00000574799 MRPS12O15235 138 aaKnown RBP7.31□□□□□ -1.24
CCDC40-212ENST00000574799 PPDPFQ9H3Y8 114 aa7.31□□□□□ -1.24
CCDC40-212ENST00000574799 C11orf21Q9P2W6 132 aa7.31□□□□□ -1.24
CCDC40-212ENST00000574799 CENPVL3A0A0U1RRI6 287 aa7.31□□□□□ -1.24
CCDC40-212ENST00000574799 M0R2P5 195 aa7.31□□□□□ -1.24
CCDC40-212ENST00000574799 TMEM126AQ9H061 195 aa7.31□□□□□ -1.24
CCDC40-212ENST00000574799 PKD1L2Q7Z442 2459 aa7.31□□□□□ -1.24
CCDC40-212ENST00000574799 HIVEP3Q5T1R4 2406 aa7.31□□□□□ -1.24
CCDC40-212ENST00000574799 C15orf32Q32M92 178 aa7.31□□□□□ -1.24
CCDC40-212ENST00000574799 CNFNQ9BYD5 112 aa7.31□□□□□ -1.24
CCDC40-212ENST00000574799 EDA2RQ9HAV5 297 aa7.31□□□□□ -1.24
CCDC40-212ENST00000574799 A0A087WWL8 130 aa7.3□□□□□ -1.24
CCDC40-212ENST00000574799 IGHV3-30P01768 117 aa7.3□□□□□ -1.24
CCDC40-212ENST00000574799 IGHV3-30-5P0DP03 117 aa7.3□□□□□ -1.24
CCDC40-212ENST00000574799 SLC25A29Q8N8R3 303 aa7.3□□□□□ -1.24
CCDC40-212ENST00000574799 TRAV21A0A0B4J279 112 aa7.3□□□□□ -1.24
CCDC40-212ENST00000574799 TRBV10-2A0A0K0K1G8 114 aa7.3□□□□□ -1.24
CCDC40-212ENST00000574799 IGHV3-33P01772 117 aa7.3□□□□□ -1.24
CCDC40-212ENST00000574799 SPXQ9BT56 116 aa7.3□□□□□ -1.24
CCDC40-212ENST00000574799 KAAG1Q9UBP8 84 aa7.3□□□□□ -1.24
CCDC40-212ENST00000574799 ANKHD1Q8IWZ3 2542 aaKnown RBP7.3□□□□□ -1.24
CCDC40-212ENST00000574799 TRGV11A0A075B6L2 103 aa7.29□□□□□ -1.24
CCDC40-212ENST00000574799 CRYGBP07316 175 aa7.29□□□□□ -1.24
CCDC40-212ENST00000574799 C11orf71Q6IPW1 123 aa7.29□□□□□ -1.24
CCDC40-212ENST00000574799 C8orf31Q8N9H6 132 aa7.29□□□□□ -1.24
CCDC40-212ENST00000574799 ABCA2Q9BZC7 2435 aa7.29□□□□□ -1.24
CCDC40-212ENST00000574799 VPREB3Q9UKI3 123 aa7.29□□□□□ -1.24
CCDC40-212ENST00000574799 SMAD5-AS1Q9Y6J3 95 aa7.29□□□□□ -1.24
CCDC40-212ENST00000574799 A0A0U1RRA0 63 aa7.28□□□□□ -1.24
CCDC40-212ENST00000574799 VCYO14598 125 aa7.28□□□□□ -1.24
CCDC40-212ENST00000574799 LY6HO94772 140 aa7.28□□□□□ -1.24
CCDC40-212ENST00000574799 CD3EP07766 207 aa7.28□□□□□ -1.24
CCDC40-212ENST00000574799 CTSGP08311 255 aa7.28□□□□□ -1.24
CCDC40-212ENST00000574799 CLEC2BQ92478 149 aa7.28□□□□□ -1.24
CCDC40-212ENST00000574799 FANCD2OSQ96PS1 177 aa7.28□□□□□ -1.24
CCDC40-212ENST00000574799 RNF5Q99942 180 aa7.28□□□□□ -1.24
CCDC40-212ENST00000574799 TNFRSF18Q9Y5U5 241 aa7.28□□□□□ -1.24
CCDC40-212ENST00000574799 PTPN13Q12923 2485 aa7.28□□□□□ -1.24
CCDC40-212ENST00000574799 SDHAF1A6NFY7 115 aa7.28□□□□□ -1.24
CCDC40-212ENST00000574799 LGALS9O00182 355 aa7.28□□□□□ -1.24
CCDC40-212ENST00000574799 IGLV1-47P01700 117 aa7.28□□□□□ -1.24
CCDC40-212ENST00000574799 SRSF2Q01130 221 aaKnown RBP7.28□□□□□ -1.24
CCDC40-212ENST00000574799 PRORYQ9H606 182 aa7.28□□□□□ -1.24
CCDC40-212ENST00000574799 IGLV11-55A0A075B6I3 123 aa7.27□□□□□ -1.25
CCDC40-212ENST00000574799 ATP5J2P56134 94 aa7.27□□□□□ -1.25
CCDC40-212ENST00000574799 ZNF672Q499Z4 452 aaPredicted RBP7.27□□□□□ -1.25
CCDC40-212ENST00000574799 Q6Q795 121 aa7.27□□□□□ -1.25
CCDC40-212ENST00000574799 RBAKDNA6NC62 111 aa7.27□□□□□ -1.25
CCDC40-212ENST00000574799 LINC01546A6NGU7 62 aa7.27□□□□□ -1.25
CCDC40-212ENST00000574799 GNRH2O43555 120 aa7.27□□□□□ -1.25
CCDC40-212ENST00000574799 OPRPNQ99935 248 aaPredicted RBP7.27□□□□□ -1.25
CCDC40-212ENST00000574799 ZANQ9Y493 2812 aa7.27□□□□□ -1.25
CCDC40-212ENST00000574799 IGHV7-4-1A0A0J9YVY3 117 aa7.26□□□□□ -1.25
CCDC40-212ENST00000574799 TSPEAR-AS2P59090 65 aa7.26□□□□□ -1.25
CCDC40-212ENST00000574799 RS1O15537 224 aa7.26□□□□□ -1.25
CCDC40-212ENST00000574799 TRIAP1O43715 76 aa7.26□□□□□ -1.25
CCDC40-212ENST00000574799 LINC00694P0DN24 101 aa7.26□□□□□ -1.25
CCDC40-212ENST00000574799 HTN1P15515 57 aa7.26□□□□□ -1.25
CCDC40-212ENST00000574799 DEFB1P60022 68 aa7.26□□□□□ -1.25
CCDC40-212ENST00000574799 GAGE2AQ6NT46 116 aa7.26□□□□□ -1.25
CCDC40-212ENST00000574799 DUX5Q96PT3 197 aa7.26□□□□□ -1.25
CCDC40-212ENST00000574799 ODF3Q96PU9 254 aa7.26□□□□□ -1.25
CCDC40-212ENST00000574799 TENM4Q6N022 2769 aa7.26□□□□□ -1.25
CCDC40-212ENST00000574799 NOTCH3Q9UM47 2321 aa7.26□□□□□ -1.25
CCDC40-212ENST00000574799 TMEM141Q96I45 108 aa7.26□□□□□ -1.25
CCDC40-212ENST00000574799 USP24Q9UPU5 2620 aa7.26□□□□□ -1.25
CCDC40-212ENST00000574799 OOSP1A8MZH6 123 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 184.1 ms