RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 Q8NAQ8 132 aa17.25■□□□□ 0.35
ATPAF1-213ENST00000574428 MIFP14174 115 aa17.25■□□□□ 0.35
ATPAF1-213ENST00000574428 SYT8Q8NBV8 401 aa17.25■□□□□ 0.35
ATPAF1-213ENST00000574428 Q0VG73 95 aa17.24■□□□□ 0.35
ATPAF1-213ENST00000574428 MEGF8Q7Z7M0 2845 aa17.23■□□□□ 0.35
ATPAF1-213ENST00000574428 A0A1B0GW15 77 aa17.23■□□□□ 0.35
ATPAF1-213ENST00000574428 DEFA6Q01524 100 aa17.23■□□□□ 0.35
ATPAF1-213ENST00000574428 DAZ2Q13117 558 aaKnown RBP17.23■□□□□ 0.35
ATPAF1-213ENST00000574428 TRGV1A0A0A0MS02 117 aa17.23■□□□□ 0.35
ATPAF1-213ENST00000574428 OR10D4PQ8NGN7 298 aa17.23■□□□□ 0.35
ATPAF1-213ENST00000574428 TM2D3Q9BRN9 247 aa17.23■□□□□ 0.35
ATPAF1-213ENST00000574428 JPT2Q9H910 190 aa17.23■□□□□ 0.35
ATPAF1-213ENST00000574428 NUPR1O60356 82 aa17.22■□□□□ 0.35
ATPAF1-213ENST00000574428 LINC00310P59036 64 aa17.22■□□□□ 0.35
ATPAF1-213ENST00000574428 C12orf57Q99622 126 aa17.22■□□□□ 0.35
ATPAF1-213ENST00000574428 SMIM6P0DI80 62 aa17.21■□□□□ 0.35
ATPAF1-213ENST00000574428 EVI2AP22794 236 aa17.21■□□□□ 0.35
ATPAF1-213ENST00000574428 OR10J3Q5JRS4 329 aa17.21■□□□□ 0.35
ATPAF1-213ENST00000574428 Q6ZTI0 123 aa17.21■□□□□ 0.35
ATPAF1-213ENST00000574428 GATD1Q8NB37 220 aa17.21■□□□□ 0.35
ATPAF1-213ENST00000574428 SPATA25Q9BR10 227 aa17.21■□□□□ 0.35
ATPAF1-213ENST00000574428 PACRGQ96M98 296 aaPredicted RBP17.2■□□□□ 0.34
ATPAF1-213ENST00000574428 SERF1AO75920 110 aa17.2■□□□□ 0.34
ATPAF1-213ENST00000574428 BAGE3Q86Y29 109 aa17.2■□□□□ 0.34
ATPAF1-213ENST00000574428 PTH2Q96A98 100 aa17.2■□□□□ 0.34
ATPAF1-213ENST00000574428 AP1S3Q96PC3 154 aa17.2■□□□□ 0.34
ATPAF1-213ENST00000574428 C14orf178Q8N769 122 aaPredicted RBP17.19■□□□□ 0.34
ATPAF1-213ENST00000574428 RASL10AQ92737 203 aa17.19■□□□□ 0.34
ATPAF1-213ENST00000574428 ALKBH7Q9BT30 221 aaPredicted RBP17.19■□□□□ 0.34
ATPAF1-213ENST00000574428 A0A087WWL8 130 aa17.17■□□□□ 0.34
ATPAF1-213ENST00000574428 LGALS9BQ3B8N2 356 aa17.17■□□□□ 0.34
ATPAF1-213ENST00000574428 C18orf32Q8TCD1 76 aa17.17■□□□□ 0.34
ATPAF1-213ENST00000574428 B9D2Q9BPU9 175 aa17.17■□□□□ 0.34
ATPAF1-213ENST00000574428 TMEM191AQ9H0A3 160 aa17.17■□□□□ 0.34
ATPAF1-213ENST00000574428 TENM3Q9P273 2699 aa17.17■□□□□ 0.34
ATPAF1-213ENST00000574428 GAGE12BA1L429 117 aa17.17■□□□□ 0.34
ATPAF1-213ENST00000574428 GAGE7O76087 117 aa17.17■□□□□ 0.34
ATPAF1-213ENST00000574428 GAGE12FP0CL80 117 aa17.17■□□□□ 0.34
ATPAF1-213ENST00000574428 GAGE12GP0CL81 117 aa17.17■□□□□ 0.34
ATPAF1-213ENST00000574428 GAGE12IP0CL82 117 aa17.17■□□□□ 0.34
ATPAF1-213ENST00000574428 ESDP10768 282 aa17.17■□□□□ 0.34
ATPAF1-213ENST00000574428 SMIM15Q7Z3B0 74 aa17.17■□□□□ 0.34
ATPAF1-213ENST00000574428 TMEM18Q96B42 140 aa17.17■□□□□ 0.34
ATPAF1-213ENST00000574428 SAMD10Q9BYL1 202 aa17.17■□□□□ 0.34
ATPAF1-213ENST00000574428 PIK3CD-AS1Q5SR53 167 aa17.16■□□□□ 0.34
ATPAF1-213ENST00000574428 FAM222AQ5U5X8 452 aa17.16■□□□□ 0.34
ATPAF1-213ENST00000574428 AMN1Q8IY45 258 aa17.16■□□□□ 0.34
ATPAF1-213ENST00000574428 IQCJQ1A5X6 159 aa17.15■□□□□ 0.34
ATPAF1-213ENST00000574428 FAM74A4Q5TZK3 123 aa17.15■□□□□ 0.34
ATPAF1-213ENST00000574428 DEFB130BP0DP73 79 aa17.14■□□□□ 0.33
ATPAF1-213ENST00000574428 DEFB130AP0DP74 79 aa17.14■□□□□ 0.33
ATPAF1-213ENST00000574428 PYY3Q5JQD4 70 aa17.14■□□□□ 0.33
ATPAF1-213ENST00000574428 CFAP126Q5VTH2 177 aa17.14■□□□□ 0.33
ATPAF1-213ENST00000574428 DPH3P1Q9H4G8 78 aa17.14■□□□□ 0.33
ATPAF1-213ENST00000574428 DKK2Q9UBU2 259 aa17.14■□□□□ 0.33
ATPAF1-213ENST00000574428 CELA1Q9UNI1 258 aa17.14■□□□□ 0.33
ATPAF1-213ENST00000574428 KIF25-AS1Q9Y6Z4 181 aa17.14■□□□□ 0.33
ATPAF1-213ENST00000574428 A8MWV9 139 aa17.13■□□□□ 0.33
ATPAF1-213ENST00000574428 CRYGDP07320 174 aa17.13■□□□□ 0.33
ATPAF1-213ENST00000574428 SMIM17P0DL12 118 aa17.13■□□□□ 0.33
ATPAF1-213ENST00000574428 FAM104BQ5XKR9 115 aa17.13■□□□□ 0.33
ATPAF1-213ENST00000574428 ZMAT4Q9H898 229 aa17.13■□□□□ 0.33
ATPAF1-213ENST00000574428 TRGV2A0A075B6R0 118 aa17.12■□□□□ 0.33
ATPAF1-213ENST00000574428 LYRM9A8MSI8 78 aa17.12■□□□□ 0.33
ATPAF1-213ENST00000574428 MGPP08493 103 aa17.12■□□□□ 0.33
ATPAF1-213ENST00000574428 POM121L12Q8N7R1 296 aa17.12■□□□□ 0.33
ATPAF1-213ENST00000574428 RNF185Q96GF1 192 aa17.12■□□□□ 0.33
ATPAF1-213ENST00000574428 NDUFAF3Q9BU61 184 aa17.12■□□□□ 0.33
ATPAF1-213ENST00000574428 IGHV3-73A0A0B4J1V6 119 aa17.12■□□□□ 0.33
ATPAF1-213ENST00000574428 RS1O15537 224 aa17.11■□□□□ 0.33
ATPAF1-213ENST00000574428 LINC00612Q8N6U2 182 aa17.11■□□□□ 0.33
ATPAF1-213ENST00000574428 C11orf68Q9H3H3 251 aaKnown RBP17.11■□□□□ 0.33
ATPAF1-213ENST00000574428 A0A0J9YWU9 116 aa17.1■□□□□ 0.33
ATPAF1-213ENST00000574428 IGHV3-53P01767 116 aa17.1■□□□□ 0.33
ATPAF1-213ENST00000574428 RAB4AP20338 218 aa17.1■□□□□ 0.33
ATPAF1-213ENST00000574428 LINC00315P59091 139 aa17.1■□□□□ 0.33
ATPAF1-213ENST00000574428 MRPL51Q4U2R6 128 aaKnown RBP17.1■□□□□ 0.33
ATPAF1-213ENST00000574428 OR4C5Q8NGB2 326 aa17.1■□□□□ 0.33
ATPAF1-213ENST00000574428 SPART-AS1P0CW21 52 aa17.09■□□□□ 0.33
ATPAF1-213ENST00000574428 UFSP1Q6NVU6 142 aa17.09■□□□□ 0.33
ATPAF1-213ENST00000574428 ZNF479Q96JC4 524 aa17.09■□□□□ 0.33
ATPAF1-213ENST00000574428 TRAV26-2A0A0B4J265 109 aa17.08■□□□□ 0.33
ATPAF1-213ENST00000574428 TRAV4A0A0B4J268 109 aa17.07■□□□□ 0.32
ATPAF1-213ENST00000574428 ZNF56Q15929 161 aa17.07■□□□□ 0.32
ATPAF1-213ENST00000574428 NACAE9PAV3 2078 aa17.07■□□□□ 0.32
ATPAF1-213ENST00000574428 F5H697 171 aa17.07■□□□□ 0.32
ATPAF1-213ENST00000574428 SMKR1H3BMG3 65 aa17.07■□□□□ 0.32
ATPAF1-213ENST00000574428 NCR2O95944 276 aa17.07■□□□□ 0.32
ATPAF1-213ENST00000574428 DAD1P61803 113 aa17.06■□□□□ 0.32
ATPAF1-213ENST00000574428 NIT2Q9NQR4 276 aa17.06■□□□□ 0.32
ATPAF1-213ENST00000574428 GAS8-AS1O95177 125 aa17.05■□□□□ 0.32
ATPAF1-213ENST00000574428 CDPF1Q6NVV7 123 aa17.05■□□□□ 0.32
ATPAF1-213ENST00000574428 HUWE1Q7Z6Z7 4374 aaKnown RBP17.05■□□□□ 0.32
ATPAF1-213ENST00000574428 D6R8Y8 96 aa17.05■□□□□ 0.32
ATPAF1-213ENST00000574428 RHODO00212 210 aa17.05■□□□□ 0.32
ATPAF1-213ENST00000574428 URB1-AS1Q96HZ7 61 aa17.05■□□□□ 0.32
ATPAF1-213ENST00000574428 COL7A1Q02388 2944 aa17.04■□□□□ 0.32
ATPAF1-213ENST00000574428 PMCHP20382 165 aa17.04■□□□□ 0.32
ATPAF1-213ENST00000574428 CKS2P33552 79 aa17.04■□□□□ 0.32
ATPAF1-213ENST00000574428 JOSD1Q15040 202 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms