RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 SAMD13Q5VXD3 122 aa-0.62□□□□□ -2.51
CDC27-216ENST00000574304 CYP2G1PQ6ZSU1 146 aa-0.62□□□□□ -2.51
CDC27-216ENST00000574304 SLC35B3Q9H1N7 401 aa-0.62□□□□□ -2.51
CDC27-216ENST00000574304 TAS2R8Q9NYW2 309 aa-0.62□□□□□ -2.51
CDC27-216ENST00000574304 EP300Q09472 2414 aaPredicted RBP-0.62□□□□□ -2.51
CDC27-216ENST00000574304 DSPP15924 2871 aaKnown RBP-0.62□□□□□ -2.51
CDC27-216ENST00000574304 MED23Q9ULK4 1368 aa-0.62□□□□□ -2.51
CDC27-216ENST00000574304 MAP1AP78559 2803 aaPredicted RBP-0.62□□□□□ -2.51
CDC27-216ENST00000574304 KIF13AQ9H1H9 1805 aa-0.63□□□□□ -2.51
CDC27-216ENST00000574304 ALMS1Q8TCU4 4167 aa-0.63□□□□□ -2.51
CDC27-216ENST00000574304 PIEZO2Q9H5I5 2752 aa-0.63□□□□□ -2.51
CDC27-216ENST00000574304 A0A1B0GW64 132 aa-0.63□□□□□ -2.51
CDC27-216ENST00000574304 SLC25A6P12236 298 aa-0.63□□□□□ -2.51
CDC27-216ENST00000574304 KRTAP19-8Q3LI54 63 aa-0.63□□□□□ -2.51
CDC27-216ENST00000574304 TMEM128Q5BJH2 165 aa-0.63□□□□□ -2.51
CDC27-216ENST00000574304 OR2T2Q6IF00 324 aa-0.63□□□□□ -2.51
CDC27-216ENST00000574304 CALML5Q9NZT1 146 aa-0.63□□□□□ -2.51
CDC27-216ENST00000574304 CHD6Q8TD26 2715 aa-0.63□□□□□ -2.51
CDC27-216ENST00000574304 PLXNA2O75051 1894 aa-0.63□□□□□ -2.51
CDC27-216ENST00000574304 NBEAL1Q6ZS30 2694 aa-0.63□□□□□ -2.51
CDC27-216ENST00000574304 LAMA5O15230 3695 aa-0.64□□□□□ -2.51
CDC27-216ENST00000574304 CASZ1Q86V15 1759 aa-0.64□□□□□ -2.51
CDC27-216ENST00000574304 BSNQ9UPA5 3926 aa-0.64□□□□□ -2.51
CDC27-216ENST00000574304 IFI27L1Q96BM0 104 aa-0.64□□□□□ -2.51
CDC27-216ENST00000574304 FAT3Q8TDW7 4589 aa-0.64□□□□□ -2.51
CDC27-216ENST00000574304 SSC5DA1L4H1 1573 aa-0.65□□□□□ -2.51
CDC27-216ENST00000574304 EPG5Q9HCE0 2579 aa-0.65□□□□□ -2.51
CDC27-216ENST00000574304 A0A087WTM6 91 aa-0.65□□□□□ -2.51
CDC27-216ENST00000574304 TRBV7-1A0A0A6YYK4 115 aa-0.65□□□□□ -2.51
CDC27-216ENST00000574304 A0A1B0GV72 72 aa-0.65□□□□□ -2.51
CDC27-216ENST00000574304 MT-ND4LP03901 98 aa-0.65□□□□□ -2.51
CDC27-216ENST00000574304 SNX29P2Q8IUI4 249 aa-0.65□□□□□ -2.51
CDC27-216ENST00000574304 C4orf33Q8N1A6 199 aa-0.65□□□□□ -2.51
CDC27-216ENST00000574304 TMEM242Q9NWH2 141 aa-0.65□□□□□ -2.51
CDC27-216ENST00000574304 ARHGAP31Q2M1Z3 1444 aa-0.65□□□□□ -2.51
CDC27-216ENST00000574304 COL6A5A8TX70 2615 aa-0.66□□□□□ -2.51
CDC27-216ENST00000574304 PAEPP09466 180 aa-0.66□□□□□ -2.52
CDC27-216ENST00000574304 OR8B8Q15620 311 aa-0.66□□□□□ -2.52
CDC27-216ENST00000574304 DYNLRB2Q8TF09 96 aa-0.66□□□□□ -2.52
CDC27-216ENST00000574304 WNK1Q9H4A3 2382 aa-0.66□□□□□ -2.52
CDC27-216ENST00000574304 TGP01266 2768 aa-0.66□□□□□ -2.52
CDC27-216ENST00000574304 NBEAL2Q6ZNJ1 2754 aa-0.66□□□□□ -2.52
CDC27-216ENST00000574304 VWFP04275 2813 aa-0.66□□□□□ -2.52
CDC27-216ENST00000574304 SPTBN2O15020 2390 aa-0.67□□□□□ -2.52
CDC27-216ENST00000574304 LAMA2P24043 3122 aaKnown RBP-0.67□□□□□ -2.52
CDC27-216ENST00000574304 DPM2O94777 84 aa-0.67□□□□□ -2.52
CDC27-216ENST00000574304 PRM1P04553 51 aa-0.67□□□□□ -2.52
CDC27-216ENST00000574304 ACYP2P14621 99 aa-0.67□□□□□ -2.52
CDC27-216ENST00000574304 CCL3L1P16619 93 aa-0.67□□□□□ -2.52
CDC27-216ENST00000574304 S100GP29377 79 aa-0.67□□□□□ -2.52
CDC27-216ENST00000574304 TMEM91Q6ZNR0 172 aa-0.67□□□□□ -2.52
CDC27-216ENST00000574304 NOP16Q9Y3C1 178 aaKnown RBP-0.67□□□□□ -2.52
CDC27-216ENST00000574304 DNAJC15Q9Y5T4 150 aa-0.67□□□□□ -2.52
CDC27-216ENST00000574304 CCDC171Q6TFL3 1326 aa-0.67□□□□□ -2.52
CDC27-216ENST00000574304 FABP1P07148 127 aa-0.68□□□□□ -2.52
CDC27-216ENST00000574304 KDM5CP41229 1560 aa-0.68□□□□□ -2.52
CDC27-216ENST00000574304 NPC2P61916 151 aa-0.68□□□□□ -2.52
CDC27-216ENST00000574304 SSBP1Q04837 148 aaKnown RBP-0.68□□□□□ -2.52
CDC27-216ENST00000574304 DEFB109BQ30KR1 87 aa-0.68□□□□□ -2.52
CDC27-216ENST00000574304 TOMM20LQ6UXN7 152 aa-0.68□□□□□ -2.52
CDC27-216ENST00000574304 Q6ZRX8 168 aa-0.68□□□□□ -2.52
CDC27-216ENST00000574304 OR8I2Q8N0Y5 310 aa-0.68□□□□□ -2.52
CDC27-216ENST00000574304 C20orf197Q8N268 126 aa-0.68□□□□□ -2.52
CDC27-216ENST00000574304 Q96NJ1 140 aa-0.68□□□□□ -2.52
CDC27-216ENST00000574304 BANF2Q9H503 90 aa-0.68□□□□□ -2.52
CDC27-216ENST00000574304 NHSL1Q5SYE7 1610 aa-0.68□□□□□ -2.52
CDC27-216ENST00000574304 DOPEY2Q9Y3R5 2298 aa-0.68□□□□□ -2.52
CDC27-216ENST00000574304 FAT2Q9NYQ8 4349 aa-0.68□□□□□ -2.52
CDC27-216ENST00000574304 PLXNA1Q9UIW2 1896 aa-0.69□□□□□ -2.52
CDC27-216ENST00000574304 AKAP11Q9UKA4 1901 aa-0.69□□□□□ -2.52
CDC27-216ENST00000574304 OVOS2A0A0G2JMS6 1433 aa-0.69□□□□□ -2.52
CDC27-216ENST00000574304 TRAV2A0A0B4J234 112 aa-0.69□□□□□ -2.52
CDC27-216ENST00000574304 SMIM24O75264 130 aa-0.69□□□□□ -2.52
CDC27-216ENST00000574304 GCHFRP30047 84 aa-0.69□□□□□ -2.52
CDC27-216ENST00000574304 FAM74A4Q5TZK3 123 aa-0.69□□□□□ -2.52
CDC27-216ENST00000574304 TMEM244Q5VVB8 128 aa-0.69□□□□□ -2.52
CDC27-216ENST00000574304 SLC48A1Q6P1K1 146 aa-0.69□□□□□ -2.52
CDC27-216ENST00000574304 COX7B2Q8TF08 81 aa-0.69□□□□□ -2.52
CDC27-216ENST00000574304 PRO0255Q9UI72 69 aa-0.69□□□□□ -2.52
CDC27-216ENST00000574304 V9GYV3 84 aa-0.69□□□□□ -2.52
CDC27-216ENST00000574304 XIRP1Q702N8 1843 aaKnown RBP-0.69□□□□□ -2.52
CDC27-216ENST00000574304 BIRC6Q9NR09 4857 aa-0.7□□□□□ -2.52
CDC27-216ENST00000574304 BIVM-ERCC5R4GMW8 1640 aa-0.7□□□□□ -2.52
CDC27-216ENST00000574304 M0R3E3 92 aa-0.7□□□□□ -2.52
CDC27-216ENST00000574304 KRTAP20-1Q3LI63 56 aa-0.7□□□□□ -2.52
CDC27-216ENST00000574304 SSBP3-AS1Q7Z2R9 100 aa-0.7□□□□□ -2.52
CDC27-216ENST00000574304 SMPXQ9UHP9 88 aa-0.7□□□□□ -2.52
CDC27-216ENST00000574304 V9GYQ6 96 aa-0.7□□□□□ -2.52
CDC27-216ENST00000574304 PKDREJQ9NTG1 2253 aa-0.7□□□□□ -2.52
CDC27-216ENST00000574304 USP9XQ93008 2570 aaPredicted RBP-0.7□□□□□ -2.52
CDC27-216ENST00000574304 FLNBO75369 2602 aaKnown RBP-0.7□□□□□ -2.52
CDC27-216ENST00000574304 ZNF142P52746 1687 aaPredicted RBP-0.71□□□□□ -2.52
CDC27-216ENST00000574304 COL12A1Q99715 3063 aa-0.71□□□□□ -2.52
CDC27-216ENST00000574304 BORCS7-ASMTA0A0B4J1R7 106 aa-0.71□□□□□ -2.52
CDC27-216ENST00000574304 ZNF815PA8K554 130 aa-0.71□□□□□ -2.52
CDC27-216ENST00000574304 J3KT08 172 aa-0.71□□□□□ -2.52
CDC27-216ENST00000574304 RBP4P02753 201 aa-0.71□□□□□ -2.52
CDC27-216ENST00000574304 HLA-DRB4P13762 266 aa-0.71□□□□□ -2.52
CDC27-216ENST00000574304 CLLU1Q5K131 121 aa-0.71□□□□□ -2.52
CDC27-216ENST00000574304 NDUFA11Q86Y39 141 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms