RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 SSBP4Q9BWG4 385 aaPredicted RBP7.69□□□□□ -1.18
CHD3-216ENST00000573936 ICOSQ9Y6W8 199 aa7.69□□□□□ -1.18
CHD3-216ENST00000573936 A0A1W2PPQ1 181 aa7.68□□□□□ -1.18
CHD3-216ENST00000573936 M0R381 172 aa7.68□□□□□ -1.18
CHD3-216ENST00000573936 RHODO00212 210 aa7.68□□□□□ -1.18
CHD3-216ENST00000573936 APOC3P02656 99 aa7.68□□□□□ -1.18
CHD3-216ENST00000573936 GATA1P15976 413 aaPredicted RBP7.68□□□□□ -1.18
CHD3-216ENST00000573936 MRPL23Q16540 153 aaKnown RBP7.68□□□□□ -1.18
CHD3-216ENST00000573936 SPANXN1Q5VSR9 72 aa7.68□□□□□ -1.18
CHD3-216ENST00000573936 SFRP2Q96HF1 295 aa7.68□□□□□ -1.18
CHD3-216ENST00000573936 PRADC1Q9BSG0 188 aa7.68□□□□□ -1.18
CHD3-216ENST00000573936 KIAA1109Q2LD37 5005 aa7.67□□□□□ -1.18
CHD3-216ENST00000573936 A0A096LPF7 62 aa7.67□□□□□ -1.18
CHD3-216ENST00000573936 TRBV6-4A0A1B0GX49 114 aa7.67□□□□□ -1.18
CHD3-216ENST00000573936 F2Z2F3 143 aa7.67□□□□□ -1.18
CHD3-216ENST00000573936 GATCO43716 136 aaKnown RBP7.67□□□□□ -1.18
CHD3-216ENST00000573936 ERVFC1-1P60608 527 aa7.67□□□□□ -1.18
CHD3-216ENST00000573936 SH2D6Q7Z4S9 175 aa7.67□□□□□ -1.18
CHD3-216ENST00000573936 FER1L6-AS1Q8NA97 138 aa7.67□□□□□ -1.18
CHD3-216ENST00000573936 RPP21Q9H633 154 aaKnown RBP7.67□□□□□ -1.18
CHD3-216ENST00000573936 OSTCQ9NRP0 149 aa7.67□□□□□ -1.18
CHD3-216ENST00000573936 IGHV3-73A0A0B4J1V6 119 aa7.66□□□□□ -1.18
CHD3-216ENST00000573936 ATP6V1G1O75348 118 aa7.66□□□□□ -1.18
CHD3-216ENST00000573936 NXPH4O95158 308 aa7.66□□□□□ -1.18
CHD3-216ENST00000573936 GYPEP15421 78 aa7.66□□□□□ -1.18
CHD3-216ENST00000573936 CACNG7P62955 275 aa7.66□□□□□ -1.18
CHD3-216ENST00000573936 RHOHQ15669 191 aa7.66□□□□□ -1.18
CHD3-216ENST00000573936 WDR73Q6P4I2 378 aa7.66□□□□□ -1.18
CHD3-216ENST00000573936 SVBPQ8N300 66 aa7.66□□□□□ -1.18
CHD3-216ENST00000573936 C15orf54Q8N8G6 183 aa7.66□□□□□ -1.18
CHD3-216ENST00000573936 CLRN3Q8NCR9 226 aa7.66□□□□□ -1.18
CHD3-216ENST00000573936 OR10G8Q8NGN5 311 aa7.66□□□□□ -1.18
CHD3-216ENST00000573936 V9GYV3 84 aa7.66□□□□□ -1.18
CHD3-216ENST00000573936 DNAH17Q9UFH2 4485 aa7.66□□□□□ -1.18
CHD3-216ENST00000573936 A8MWL6 223 aa7.65□□□□□ -1.18
CHD3-216ENST00000573936 K7EQD1 137 aa7.65□□□□□ -1.18
CHD3-216ENST00000573936 IGLC6P0CF74 106 aa7.65□□□□□ -1.18
CHD3-216ENST00000573936 GZMBP10144 247 aa7.65□□□□□ -1.18
CHD3-216ENST00000573936 SRIP30626 198 aa7.65□□□□□ -1.18
CHD3-216ENST00000573936 UFSP1Q6NVU6 142 aa7.65□□□□□ -1.18
CHD3-216ENST00000573936 NEGR1Q7Z3B1 354 aa7.65□□□□□ -1.18
CHD3-216ENST00000573936 SLC25A29Q8N8R3 303 aa7.65□□□□□ -1.18
CHD3-216ENST00000573936 OR10AG1Q8NH19 301 aa7.65□□□□□ -1.18
CHD3-216ENST00000573936 TPPP3Q9BW30 176 aa7.65□□□□□ -1.18
CHD3-216ENST00000573936 JPT2Q9H910 190 aa7.65□□□□□ -1.18
CHD3-216ENST00000573936 C7orf77A4D0Y5 90 aa7.64□□□□□ -1.19
CHD3-216ENST00000573936 SNAPINO95295 136 aa7.64□□□□□ -1.19
CHD3-216ENST00000573936 MT-ND4LP03901 98 aa7.64□□□□□ -1.19
CHD3-216ENST00000573936 CRYGDP07320 174 aa7.64□□□□□ -1.19
CHD3-216ENST00000573936 SMIM17P0DL12 118 aa7.64□□□□□ -1.19
CHD3-216ENST00000573936 RHEBQ15382 184 aa7.64□□□□□ -1.19
CHD3-216ENST00000573936 ESRGQ1W209 222 aa7.64□□□□□ -1.19
CHD3-216ENST00000573936 CT83Q5H943 113 aa7.64□□□□□ -1.19
CHD3-216ENST00000573936 FAM74A4Q5TZK3 123 aa7.64□□□□□ -1.19
CHD3-216ENST00000573936 LYZL1Q6UWQ5 148 aa7.64□□□□□ -1.19
CHD3-216ENST00000573936 SAMD10Q9BYL1 202 aa7.64□□□□□ -1.19
CHD3-216ENST00000573936 LINC00588Q9Y4M8 146 aa7.64□□□□□ -1.19
CHD3-216ENST00000573936 MUC4Q99102 2169 aa7.64□□□□□ -1.19
CHD3-216ENST00000573936 A0A087WWL8 130 aa7.63□□□□□ -1.19
CHD3-216ENST00000573936 PPP1R2P9O14990 202 aa7.63□□□□□ -1.19
CHD3-216ENST00000573936 ATRAIDQ6UW56 229 aa7.63□□□□□ -1.19
CHD3-216ENST00000573936 ANAPC16Q96DE5 110 aa7.63□□□□□ -1.19
CHD3-216ENST00000573936 AP1S3Q96PC3 154 aa7.63□□□□□ -1.19
CHD3-216ENST00000573936 UPK3BQ9BT76 320 aa7.63□□□□□ -1.19
CHD3-216ENST00000573936 MRPS16Q9Y3D3 137 aaKnown RBP7.63□□□□□ -1.19
CHD3-216ENST00000573936 DYNC1H1Q14204 4646 aaKnown RBP7.63□□□□□ -1.19
CHD3-216ENST00000573936 A0A087WWC5 75 aa7.62□□□□□ -1.19
CHD3-216ENST00000573936 MUC21A0A0G2JKD1 596 aa7.62□□□□□ -1.19
CHD3-216ENST00000573936 MUC21A0A140T8X8 626 aa7.62□□□□□ -1.19
CHD3-216ENST00000573936 TRGC1P0CF51 173 aa7.62□□□□□ -1.19
CHD3-216ENST00000573936 CTRLP40313 264 aa7.62□□□□□ -1.19
CHD3-216ENST00000573936 FOXA3P55318 350 aaPredicted RBP7.62□□□□□ -1.19
CHD3-216ENST00000573936 RAB4BP61018 213 aa7.62□□□□□ -1.19
CHD3-216ENST00000573936 SSTP61278 116 aa7.62□□□□□ -1.19
CHD3-216ENST00000573936 LYPD5Q6UWN5 251 aa7.62□□□□□ -1.19
CHD3-216ENST00000573936 TSKUQ8WUA8 353 aa7.62□□□□□ -1.19
CHD3-216ENST00000573936 GTSF1Q8WW33 167 aa7.62□□□□□ -1.19
CHD3-216ENST00000573936 CTDSP1Q9GZU7 261 aa7.62□□□□□ -1.19
CHD3-216ENST00000573936 GFRA4Q9GZZ7 299 aa7.62□□□□□ -1.19
CHD3-216ENST00000573936 RPS10P5Q9NQ39 176 aa7.62□□□□□ -1.19
CHD3-216ENST00000573936 DNAH11Q96DT5 4516 aa7.61□□□□□ -1.19
CHD3-216ENST00000573936 TRBV10-1A0A0K0K1A3 114 aa7.61□□□□□ -1.19
CHD3-216ENST00000573936 LOC100131303A0A0U1RQF7 123 aa7.61□□□□□ -1.19
CHD3-216ENST00000573936 SMIM27A0A1W2PRY6 76 aa7.61□□□□□ -1.19
CHD3-216ENST00000573936 FAM231BA6NCW3 169 aa7.61□□□□□ -1.19
CHD3-216ENST00000573936 NTF3P20783 257 aa7.61□□□□□ -1.19
CHD3-216ENST00000573936 S100A1P23297 94 aa7.61□□□□□ -1.19
CHD3-216ENST00000573936 TIRAPP58753 221 aa7.61□□□□□ -1.19
CHD3-216ENST00000573936 ZNF56Q15929 161 aa7.61□□□□□ -1.19
CHD3-216ENST00000573936 Q6ZSN1 163 aa7.61□□□□□ -1.19
CHD3-216ENST00000573936 C14orf178Q8N769 122 aaPredicted RBP7.61□□□□□ -1.19
CHD3-216ENST00000573936 ZNRF2Q8NHG8 242 aa7.61□□□□□ -1.19
CHD3-216ENST00000573936 BORCS7Q96B45 105 aa7.61□□□□□ -1.19
CHD3-216ENST00000573936 CNFNQ9BYD5 112 aa7.61□□□□□ -1.19
CHD3-216ENST00000573936 Q9H8V8 135 aa7.61□□□□□ -1.19
CHD3-216ENST00000573936 TWIST1Q15672 202 aa7.6□□□□□ -1.19
CHD3-216ENST00000573936 SMIM15Q7Z3B0 74 aa7.6□□□□□ -1.19
CHD3-216ENST00000573936 ATP6V0E2Q8NHE4 81 aa7.6□□□□□ -1.19
CHD3-216ENST00000573936 PKD1P98161 4303 aa7.6□□□□□ -1.19
CHD3-216ENST00000573936 GAGE12JA6NER3 117 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms