RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 CIDEAO60543 219 aa9.61□□□□□ -0.87
TVP23A-208ENST00000573857 ZNF674Q2M3X9 581 aa9.61□□□□□ -0.87
TVP23A-208ENST00000573857 CENPWQ5EE01 88 aa9.61□□□□□ -0.87
TVP23A-208ENST00000573857 ZC2HC1AQ96GY0 325 aa9.61□□□□□ -0.87
TVP23A-208ENST00000573857 PRADC1Q9BSG0 188 aa9.61□□□□□ -0.87
TVP23A-208ENST00000573857 MYCBP2O75592 4640 aa9.6□□□□□ -0.87
TVP23A-208ENST00000573857 TRBV6-4A0A1B0GX49 114 aa9.6□□□□□ -0.87
TVP23A-208ENST00000573857 GCSHP23434 173 aa9.6□□□□□ -0.87
TVP23A-208ENST00000573857 RHOHQ15669 191 aa9.6□□□□□ -0.87
TVP23A-208ENST00000573857 FAM74A3Q4VXF1 159 aa9.6□□□□□ -0.87
TVP23A-208ENST00000573857 CLLU1Q5K131 121 aa9.6□□□□□ -0.87
TVP23A-208ENST00000573857 DAZAP1Q96EP5 407 aaKnown RBP9.6□□□□□ -0.87
TVP23A-208ENST00000573857 C9orf85Q96MD7 179 aa9.6□□□□□ -0.87
TVP23A-208ENST00000573857 IGHV3-73A0A0B4J1V6 119 aa9.59□□□□□ -0.87
TVP23A-208ENST00000573857 TRAV8-6A0A0B4J262 113 aa9.59□□□□□ -0.87
TVP23A-208ENST00000573857 LRCOL1A6NCL2 159 aa9.59□□□□□ -0.87
TVP23A-208ENST00000573857 PSCAO43653 123 aa9.59□□□□□ -0.87
TVP23A-208ENST00000573857 Q5VSD8 79 aa9.59□□□□□ -0.87
TVP23A-208ENST00000573857 PTH2Q96A98 100 aa9.59□□□□□ -0.87
TVP23A-208ENST00000573857 DERL1Q9BUN8 251 aa9.59□□□□□ -0.87
TVP23A-208ENST00000573857 PGPEP1LA6NFU8 196 aa9.58□□□□□ -0.88
TVP23A-208ENST00000573857 IBA57-AS1B1ANH7 110 aa9.58□□□□□ -0.88
TVP23A-208ENST00000573857 B4DEV8 164 aa9.58□□□□□ -0.88
TVP23A-208ENST00000573857 SH2D1AO60880 128 aa9.58□□□□□ -0.88
TVP23A-208ENST00000573857 S100A4P26447 101 aaKnown RBP9.58□□□□□ -0.88
TVP23A-208ENST00000573857 LINC01559Q495D7 138 aa9.58□□□□□ -0.88
TVP23A-208ENST00000573857 OR10J3Q5JRS4 329 aa9.58□□□□□ -0.88
TVP23A-208ENST00000573857 FRZBQ92765 325 aa9.58□□□□□ -0.88
TVP23A-208ENST00000573857 PARLQ9H300 379 aa9.58□□□□□ -0.88
TVP23A-208ENST00000573857 DMBT1Q9UGM3 2413 aaPredicted RBP9.58□□□□□ -0.88
TVP23A-208ENST00000573857 IGLV5-52A0A0A0MRZ9 124 aa9.57□□□□□ -0.88
TVP23A-208ENST00000573857 XKRY2A2RUG3 117 aa9.57□□□□□ -0.88
TVP23A-208ENST00000573857 RAB19A4D1S5 217 aa9.57□□□□□ -0.88
TVP23A-208ENST00000573857 CXCL1P09341 107 aa9.57□□□□□ -0.88
TVP23A-208ENST00000573857 INAFM2P0DMQ5 153 aa9.57□□□□□ -0.88
TVP23A-208ENST00000573857 MGST1P10620 155 aaKnown RBP9.57□□□□□ -0.88
TVP23A-208ENST00000573857 RNASE3P12724 160 aaKnown RBP9.57□□□□□ -0.88
TVP23A-208ENST00000573857 ASIPP42127 132 aa9.57□□□□□ -0.88
TVP23A-208ENST00000573857 CRIP1P50238 77 aa9.57□□□□□ -0.88
TVP23A-208ENST00000573857 DNLZQ5SXM8 178 aa9.57□□□□□ -0.88
TVP23A-208ENST00000573857 LELP1Q5T871 98 aa9.57□□□□□ -0.88
TVP23A-208ENST00000573857 NTN5Q8WTR8 489 aaPredicted RBP9.57□□□□□ -0.88
TVP23A-208ENST00000573857 Q9HAA7 133 aa9.57□□□□□ -0.88
TVP23A-208ENST00000573857 SRRM2Q9UQ35 2752 aaKnown RBP9.57□□□□□ -0.88
TVP23A-208ENST00000573857 KRBOX1C9JBD0 128 aa9.56□□□□□ -0.88
TVP23A-208ENST00000573857 IGHV3-30P01768 117 aa9.56□□□□□ -0.88
TVP23A-208ENST00000573857 IGHV3-33P01772 117 aa9.56□□□□□ -0.88
TVP23A-208ENST00000573857 SRP19P09132 144 aaKnown RBP9.56□□□□□ -0.88
TVP23A-208ENST00000573857 IGHV3-30-3P0DP02 117 aa9.56□□□□□ -0.88
TVP23A-208ENST00000573857 IGHV3-30-5P0DP03 117 aa9.56□□□□□ -0.88
TVP23A-208ENST00000573857 RPS20P60866 119 aaKnown RBP9.56□□□□□ -0.88
TVP23A-208ENST00000573857 PIK3CD-AS1Q5SR53 167 aa9.56□□□□□ -0.88
TVP23A-208ENST00000573857 ATP6V0E2Q8NHE4 81 aa9.56□□□□□ -0.88
TVP23A-208ENST00000573857 SMIM7Q9BQ49 75 aa9.56□□□□□ -0.88
TVP23A-208ENST00000573857 GTSF1LQ9H1H1 148 aa9.56□□□□□ -0.88
TVP23A-208ENST00000573857 IL36BQ9NZH7 164 aa9.56□□□□□ -0.88
TVP23A-208ENST00000573857 IGKV3D-20A0A0C4DH25 116 aa9.55□□□□□ -0.88
TVP23A-208ENST00000573857 ZNF727A8MUV8 499 aa9.55□□□□□ -0.88
TVP23A-208ENST00000573857 CEBPGP53567 150 aa9.55□□□□□ -0.88
TVP23A-208ENST00000573857 PRR27Q6MZM9 219 aa9.55□□□□□ -0.88
TVP23A-208ENST00000573857 Q6ZSN1 163 aa9.55□□□□□ -0.88
TVP23A-208ENST00000573857 Q8N814 137 aa9.55□□□□□ -0.88
TVP23A-208ENST00000573857 TRBV20OR9-2A0A075B6H5 130 aa9.54□□□□□ -0.88
TVP23A-208ENST00000573857 IGLV2-8P01709 118 aa9.54□□□□□ -0.88
TVP23A-208ENST00000573857 P01737 135 aa9.54□□□□□ -0.88
TVP23A-208ENST00000573857 HAMPP81172 84 aa9.54□□□□□ -0.88
TVP23A-208ENST00000573857 IFITM2Q01629 132 aa9.54□□□□□ -0.88
TVP23A-208ENST00000573857 LAGE3Q14657 143 aa9.54□□□□□ -0.88
TVP23A-208ENST00000573857 SYT8Q8NBV8 401 aa9.54□□□□□ -0.88
TVP23A-208ENST00000573857 TMEM70Q9BUB7 260 aa9.54□□□□□ -0.88
TVP23A-208ENST00000573857 DNAH8Q96JB1 4490 aa9.54□□□□□ -0.88
TVP23A-208ENST00000573857 A8MWV9 139 aa9.53□□□□□ -0.88
TVP23A-208ENST00000573857 M0R036 132 aa9.53□□□□□ -0.88
TVP23A-208ENST00000573857 SMR3BP02814 79 aaPredicted RBP9.53□□□□□ -0.88
TVP23A-208ENST00000573857 LINC00694P0DN24 101 aa9.53□□□□□ -0.88
TVP23A-208ENST00000573857 TMEM241Q24JQ0 296 aa9.53□□□□□ -0.88
TVP23A-208ENST00000573857 UQCC3Q6UW78 93 aa9.53□□□□□ -0.88
TVP23A-208ENST00000573857 ZFP2Q6ZN57 461 aa9.53□□□□□ -0.88
TVP23A-208ENST00000573857 OCC1Q8TAD7 63 aa9.53□□□□□ -0.88
TVP23A-208ENST00000573857 C19orf71A6NCJ1 209 aa9.52□□□□□ -0.89
TVP23A-208ENST00000573857 UFSP1Q6NVU6 142 aa9.52□□□□□ -0.89
TVP23A-208ENST00000573857 FAM231DQ6ZW35 169 aa9.52□□□□□ -0.89
TVP23A-208ENST00000573857 Q8N3U1 123 aa9.52□□□□□ -0.89
TVP23A-208ENST00000573857 PHLDA3Q9Y5J5 127 aa9.52□□□□□ -0.89
TVP23A-208ENST00000573857 FLG2Q5D862 2391 aaPredicted RBP9.52□□□□□ -0.89
TVP23A-208ENST00000573857 GAGE12JA6NER3 117 aa9.51□□□□□ -0.89
TVP23A-208ENST00000573857 GAGE1Q13065 139 aa9.51□□□□□ -0.89
TVP23A-208ENST00000573857 GAGE4Q13068 117 aa9.51□□□□□ -0.89
TVP23A-208ENST00000573857 GAGE5Q13069 117 aa9.51□□□□□ -0.89
TVP23A-208ENST00000573857 GAGE13Q4V321 117 aa9.51□□□□□ -0.89
TVP23A-208ENST00000573857 TM2D2Q9BX73 214 aa9.51□□□□□ -0.89
TVP23A-208ENST00000573857 NAT8Q9UHE5 227 aa9.51□□□□□ -0.89
TVP23A-208ENST00000573857 F2Z2F3 143 aa9.5□□□□□ -0.89
TVP23A-208ENST00000573857 FAM229AH3BQW9 127 aa9.5□□□□□ -0.89
TVP23A-208ENST00000573857 OR5AL1P0C617 328 aa9.5□□□□□ -0.89
TVP23A-208ENST00000573857 ARMS2P0C7Q2 107 aa9.5□□□□□ -0.89
TVP23A-208ENST00000573857 WFDC2Q14508 124 aa9.5□□□□□ -0.89
TVP23A-208ENST00000573857 LINC01551Q86U37 167 aa9.5□□□□□ -0.89
TVP23A-208ENST00000573857 ZFP82Q8N141 532 aa9.5□□□□□ -0.89
TVP23A-208ENST00000573857 OR2D3Q8NGH3 330 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms