RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 PMVKQ15126 192 aa14.24□□□□□ -0.13
SCARF1-206ENST00000573852 NCOR2Q9Y618 2525 aa14.24□□□□□ -0.13
SCARF1-206ENST00000573852 F5H697 171 aa14.24□□□□□ -0.13
SCARF1-206ENST00000573852 CD7P09564 240 aa14.24□□□□□ -0.13
SCARF1-206ENST00000573852 SFTA2Q6UW10 78 aa14.24□□□□□ -0.13
SCARF1-206ENST00000573852 TMEM238LA0A1B0GVL6 79 aa14.23□□□□□ -0.13
SCARF1-206ENST00000573852 A6NJY4 79 aa14.23□□□□□ -0.13
SCARF1-206ENST00000573852 VCYO14598 125 aa14.23□□□□□ -0.13
SCARF1-206ENST00000573852 Q5PR19 223 aa14.23□□□□□ -0.13
SCARF1-206ENST00000573852 DCANP1Q8TF63 244 aa14.23□□□□□ -0.13
SCARF1-206ENST00000573852 SPTBN4Q9H254 2564 aa14.23□□□□□ -0.13
SCARF1-206ENST00000573852 CHD8Q9HCK8 2581 aa14.23□□□□□ -0.13
SCARF1-206ENST00000573852 A0A0J9YY99 117 aa14.22□□□□□ -0.13
SCARF1-206ENST00000573852 SDHAF1A6NFY7 115 aa14.22□□□□□ -0.13
SCARF1-206ENST00000573852 TSPAN13O95857 204 aa14.22□□□□□ -0.13
SCARF1-206ENST00000573852 TSPEAR-AS2P59090 65 aa14.22□□□□□ -0.13
SCARF1-206ENST00000573852 KIR2DL4Q99706 377 aa14.22□□□□□ -0.13
SCARF1-206ENST00000573852 SPATA25Q9BR10 227 aa14.22□□□□□ -0.13
SCARF1-206ENST00000573852 SMCPP49901 116 aaPredicted RBP14.21□□□□□ -0.13
SCARF1-206ENST00000573852 APOMO95445 188 aa14.21□□□□□ -0.13
SCARF1-206ENST00000573852 HERVK_113P61574 105 aa14.21□□□□□ -0.13
SCARF1-206ENST00000573852 PAPPA-AS1Q5QFB9 102 aa14.21□□□□□ -0.13
SCARF1-206ENST00000573852 ZNRF2Q8NHG8 242 aa14.21□□□□□ -0.13
SCARF1-206ENST00000573852 TMEM141Q96I45 108 aa14.21□□□□□ -0.13
SCARF1-206ENST00000573852 PIMREGQ9BSJ6 248 aa14.21□□□□□ -0.13
SCARF1-206ENST00000573852 ITPR1Q14643 2758 aa14.21□□□□□ -0.13
SCARF1-206ENST00000573852 ID1P41134 155 aa14.2□□□□□ -0.14
SCARF1-206ENST00000573852 FAM74A4Q5TZK3 123 aa14.2□□□□□ -0.14
SCARF1-206ENST00000573852 DLX4Q92988 240 aaPredicted RBP14.2□□□□□ -0.14
SCARF1-206ENST00000573852 TIMM17AQ99595 171 aa14.2□□□□□ -0.14
SCARF1-206ENST00000573852 LOC107984156A0A0G2JMH3 177 aa14.19□□□□□ -0.14
SCARF1-206ENST00000573852 CFHR3Q02985 330 aa14.19□□□□□ -0.14
SCARF1-206ENST00000573852 TMEM95Q3KNT9 176 aa14.19□□□□□ -0.14
SCARF1-206ENST00000573852 TMEM170BQ5T4T1 132 aa14.19□□□□□ -0.14
SCARF1-206ENST00000573852 CFAP126Q5VTH2 177 aa14.19□□□□□ -0.14
SCARF1-206ENST00000573852 ARL17AQ8IVW1 177 aa14.19□□□□□ -0.14
SCARF1-206ENST00000573852 TRBV27A0A0K0K1C4 114 aa14.19□□□□□ -0.14
SCARF1-206ENST00000573852 LGALS9O00182 355 aa14.19□□□□□ -0.14
SCARF1-206ENST00000573852 MDFICQ9P1T7 246 aa14.19□□□□□ -0.14
SCARF1-206ENST00000573852 K7EMT4 169 aa14.18□□□□□ -0.14
SCARF1-206ENST00000573852 PSMB2P49721 201 aa14.18□□□□□ -0.14
SCARF1-206ENST00000573852 C10orf105Q8TEF2 133 aa14.18□□□□□ -0.14
SCARF1-206ENST00000573852 NDUFS8O00217 210 aa14.18□□□□□ -0.14
SCARF1-206ENST00000573852 ZNF876PQ49A33 203 aa14.18□□□□□ -0.14
SCARF1-206ENST00000573852 NDUFA11Q86Y39 141 aa14.18□□□□□ -0.14
SCARF1-206ENST00000573852 CELSR2Q9HCU4 2923 aa14.18□□□□□ -0.14
SCARF1-206ENST00000573852 ZNF256Q9Y2P7 627 aaPredicted RBP14.18□□□□□ -0.14
SCARF1-206ENST00000573852 TRAV12-2A0A075B6T6 113 aa14.18□□□□□ -0.14
SCARF1-206ENST00000573852 IGKV3-20P01619 116 aa14.18□□□□□ -0.14
SCARF1-206ENST00000573852 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.17□□□□□ -0.143e-6■□□□□ 10.1
SCARF1-206ENST00000573852 IGHV3-16A0A0C4DH30 117 aa14.17□□□□□ -0.14
SCARF1-206ENST00000573852 TRBV6-5A0A0K0K1A5 114 aa14.17□□□□□ -0.14
SCARF1-206ENST00000573852 ZNF688P0C7X2 276 aa14.17□□□□□ -0.14
SCARF1-206ENST00000573852 SCGB1A1P11684 91 aa14.17□□□□□ -0.14
SCARF1-206ENST00000573852 UBE2D3P61077 147 aa14.17□□□□□ -0.14
SCARF1-206ENST00000573852 UBE2D2P62837 147 aa14.17□□□□□ -0.14
SCARF1-206ENST00000573852 CRYBG3Q68DQ2 2970 aa14.17□□□□□ -0.14
SCARF1-206ENST00000573852 C9orf85Q96MD7 179 aa14.17□□□□□ -0.14
SCARF1-206ENST00000573852 OPRPNQ99935 248 aaPredicted RBP14.17□□□□□ -0.14
SCARF1-206ENST00000573852 IGHV3-30P01768 117 aa14.17□□□□□ -0.14
SCARF1-206ENST00000573852 IGHV3-30-5P0DP03 117 aa14.17□□□□□ -0.14
SCARF1-206ENST00000573852 GNLYP22749 145 aa14.17□□□□□ -0.14
SCARF1-206ENST00000573852 AMELXQ99217 191 aa14.17□□□□□ -0.14
SCARF1-206ENST00000573852 SLC25A29Q8N8R3 303 aa14.16□□□□□ -0.14
SCARF1-206ENST00000573852 SPG11Q96JI7 2443 aa14.15□□□□□ -0.14
SCARF1-206ENST00000573852 IGHV4-30-2A0A087WSY4 118 aa14.15□□□□□ -0.14
SCARF1-206ENST00000573852 M0QY20 66 aa14.15□□□□□ -0.14
SCARF1-206ENST00000573852 CFC1BP0CG36 223 aa14.15□□□□□ -0.14
SCARF1-206ENST00000573852 CFC1P0CG37 223 aa14.15□□□□□ -0.14
SCARF1-206ENST00000573852 FOXI1Q12951 378 aa14.15□□□□□ -0.14
SCARF1-206ENST00000573852 C1QTNF4Q9BXJ3 329 aa14.15□□□□□ -0.14
SCARF1-206ENST00000573852 AVPP01185 164 aa14.15□□□□□ -0.14
SCARF1-206ENST00000573852 ZNF56Q15929 161 aa14.14□□□□□ -0.15
SCARF1-206ENST00000573852 C10orf99Q6UWK7 81 aa14.14□□□□□ -0.15
SCARF1-206ENST00000573852 NFE4Q86UQ8 179 aa14.14□□□□□ -0.15
SCARF1-206ENST00000573852 Q8N1Y9 231 aa14.14□□□□□ -0.15
SCARF1-206ENST00000573852 J3QQQ9 107 aa14.14□□□□□ -0.15
SCARF1-206ENST00000573852 ZNF418Q8TF45 676 aaPredicted RBP14.14□□□□□ -0.15
SCARF1-206ENST00000573852 CCL19Q99731 98 aa14.13□□□□□ -0.15
SCARF1-206ENST00000573852 CSPG4Q6UVK1 2322 aa14.13□□□□□ -0.15
SCARF1-206ENST00000573852 A0A0J9YX75 114 aa14.13□□□□□ -0.15
SCARF1-206ENST00000573852 A0A1B0GV72 72 aa14.13□□□□□ -0.15
SCARF1-206ENST00000573852 PTH2Q96A98 100 aa14.13□□□□□ -0.15
SCARF1-206ENST00000573852 MSMBP08118 114 aa14.12□□□□□ -0.15
SCARF1-206ENST00000573852 P0DMU3 169 aa14.12□□□□□ -0.15
SCARF1-206ENST00000573852 FAM231AP0DMU4 169 aa14.12□□□□□ -0.15
SCARF1-206ENST00000573852 FAM231CP0DMU5 169 aa14.12□□□□□ -0.15
SCARF1-206ENST00000573852 TCL1BO95988 128 aa14.12□□□□□ -0.15
SCARF1-206ENST00000573852 PSMB8P28062 276 aa14.12□□□□□ -0.15
SCARF1-206ENST00000573852 ATP6V0E2Q8NHE4 81 aa14.12□□□□□ -0.15
SCARF1-206ENST00000573852 SORL1Q92673 2214 aa14.11□□□□□ -0.15
SCARF1-206ENST00000573852 SPINK13Q1W4C9 94 aa14.11□□□□□ -0.15
SCARF1-206ENST00000573852 SYT8Q8NBV8 401 aa14.11□□□□□ -0.15
SCARF1-206ENST00000573852 ODF3Q96PU9 254 aa14.11□□□□□ -0.15
SCARF1-206ENST00000573852 LGALS3P17931 250 aaKnown RBP14.1□□□□□ -0.15
SCARF1-206ENST00000573852 NSUN5P1Q3KNT7 163 aa14.1□□□□□ -0.15
SCARF1-206ENST00000573852 IGHV1OR15-1A0A075B7D0 117 aa14.1□□□□□ -0.15
SCARF1-206ENST00000573852 ATP5J2P56134 94 aa14.1□□□□□ -0.15
SCARF1-206ENST00000573852 C10orf126Q8N4M7 172 aa14.09□□□□□ -0.15
SCARF1-206ENST00000573852 RHOHQ15669 191 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms