RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 UQCC3Q6UW78 93 aa11.97□□□□□ -0.49
LITAF-212ENST00000573332 LYZL1Q6UWQ5 148 aa11.97□□□□□ -0.49
LITAF-212ENST00000573332 CNFNQ9BYD5 112 aa11.97□□□□□ -0.49
LITAF-212ENST00000573332 IGHV3-73A0A0B4J1V6 119 aa11.96□□□□□ -0.49
LITAF-212ENST00000573332 K7EQD1 137 aa11.96□□□□□ -0.49
LITAF-212ENST00000573332 GYPEP15421 78 aa11.96□□□□□ -0.49
LITAF-212ENST00000573332 CCL18P55774 89 aa11.96□□□□□ -0.49
LITAF-212ENST00000573332 GTSF1Q8WW33 167 aa11.96□□□□□ -0.49
LITAF-212ENST00000573332 PRADC1Q9BSG0 188 aa11.96□□□□□ -0.49
LITAF-212ENST00000573332 A0A087WWL8 130 aa11.95□□□□□ -0.5
LITAF-212ENST00000573332 MUC21A0A0G2JKD1 596 aa11.95□□□□□ -0.5
LITAF-212ENST00000573332 MUC21A0A140T8X8 626 aa11.95□□□□□ -0.5
LITAF-212ENST00000573332 FAM231BA6NCW3 169 aa11.95□□□□□ -0.5
LITAF-212ENST00000573332 ADIRFQ15847 76 aa11.95□□□□□ -0.5
LITAF-212ENST00000573332 Q6ZSN1 163 aa11.95□□□□□ -0.5
LITAF-212ENST00000573332 UBE2DNLQ8IWF7 75 aa11.95□□□□□ -0.5
LITAF-212ENST00000573332 C15orf54Q8N8G6 183 aa11.95□□□□□ -0.5
LITAF-212ENST00000573332 TPPP3Q9BW30 176 aa11.95□□□□□ -0.5
LITAF-212ENST00000573332 GFRA4Q9GZZ7 299 aa11.95□□□□□ -0.5
LITAF-212ENST00000573332 VPS13DQ5THJ4 4388 aa11.94□□□□□ -0.5
LITAF-212ENST00000573332 ESRGQ1W209 222 aa11.94□□□□□ -0.5
LITAF-212ENST00000573332 FAM74A4Q5TZK3 123 aa11.94□□□□□ -0.5
LITAF-212ENST00000573332 NEGR1Q7Z3B1 354 aa11.94□□□□□ -0.5
LITAF-212ENST00000573332 SH2D6Q7Z4S9 175 aa11.94□□□□□ -0.5
LITAF-212ENST00000573332 TSKUQ8WUA8 353 aa11.94□□□□□ -0.5
LITAF-212ENST00000573332 AP1S3Q96PC3 154 aa11.94□□□□□ -0.5
LITAF-212ENST00000573332 LINC00588Q9Y4M8 146 aa11.94□□□□□ -0.5
LITAF-212ENST00000573332 KIF25-AS1Q9Y6Z4 181 aa11.94□□□□□ -0.5
LITAF-212ENST00000573332 V9GYV3 84 aa11.94□□□□□ -0.5
LITAF-212ENST00000573332 NACAE9PAV3 2078 aa11.94□□□□□ -0.5
LITAF-212ENST00000573332 LOC100131303A0A0U1RQF7 123 aa11.93□□□□□ -0.5
LITAF-212ENST00000573332 NTF3P20783 257 aa11.93□□□□□ -0.5
LITAF-212ENST00000573332 SRIP30626 198 aa11.93□□□□□ -0.5
LITAF-212ENST00000573332 OR10G8Q8NGN5 311 aa11.93□□□□□ -0.5
LITAF-212ENST00000573332 MSRB1Q9NZV6 116 aa11.93□□□□□ -0.5
LITAF-212ENST00000573332 LINC00862A6NCI5 91 aa11.92□□□□□ -0.5
LITAF-212ENST00000573332 LINC00315P59091 139 aa11.92□□□□□ -0.5
LITAF-212ENST00000573332 RAB4BP61018 213 aa11.92□□□□□ -0.5
LITAF-212ENST00000573332 C14orf178Q8N769 122 aaPredicted RBP11.92□□□□□ -0.5
LITAF-212ENST00000573332 UPK3BQ9BT76 320 aa11.92□□□□□ -0.5
LITAF-212ENST00000573332 RYR2Q92736 4967 aa11.92□□□□□ -0.5
LITAF-212ENST00000573332 TRGC1P0CF51 173 aa11.91□□□□□ -0.5
LITAF-212ENST00000573332 SSTP61278 116 aa11.91□□□□□ -0.5
LITAF-212ENST00000573332 PNRC1Q12796 327 aaPredicted RBP11.91□□□□□ -0.5
LITAF-212ENST00000573332 LYPD5Q6UWN5 251 aa11.91□□□□□ -0.5
LITAF-212ENST00000573332 MRPS16Q9Y3D3 137 aaKnown RBP11.91□□□□□ -0.5
LITAF-212ENST00000573332 TRBV10-1A0A0K0K1A3 114 aa11.9□□□□□ -0.5
LITAF-212ENST00000573332 TMEM218A2RU14 115 aa11.9□□□□□ -0.5
LITAF-212ENST00000573332 SMIM17P0DL12 118 aa11.9□□□□□ -0.5
LITAF-212ENST00000573332 TIRAPP58753 221 aa11.9□□□□□ -0.5
LITAF-212ENST00000573332 ZNRF2Q8NHG8 242 aa11.9□□□□□ -0.5
LITAF-212ENST00000573332 HIGD1CA8MV81 97 aa11.89□□□□□ -0.51
LITAF-212ENST00000573332 LINC00694P0DN24 101 aa11.89□□□□□ -0.51
LITAF-212ENST00000573332 COMMD7Q86VX2 200 aa11.89□□□□□ -0.51
LITAF-212ENST00000573332 RYR3Q15413 4870 aa11.89□□□□□ -0.51
LITAF-212ENST00000573332 EVI2AP22794 236 aa11.88□□□□□ -0.51
LITAF-212ENST00000573332 TWIST1Q15672 202 aa11.88□□□□□ -0.51
LITAF-212ENST00000573332 ZNF56Q15929 161 aa11.88□□□□□ -0.51
LITAF-212ENST00000573332 PGLYRP4Q96LB8 373 aa11.88□□□□□ -0.51
LITAF-212ENST00000573332 DPH3P1Q9H4G8 78 aa11.88□□□□□ -0.51
LITAF-212ENST00000573332 SMIM27A0A1W2PRY6 76 aa11.87□□□□□ -0.51
LITAF-212ENST00000573332 BORCS7Q96B45 105 aa11.87□□□□□ -0.51
LITAF-212ENST00000573332 Q9UF83 564 aa11.87□□□□□ -0.51
LITAF-212ENST00000573332 A0A1B0GUT8 65 aa11.86□□□□□ -0.51
LITAF-212ENST00000573332 PPP1R2P9O14990 202 aa11.86□□□□□ -0.51
LITAF-212ENST00000573332 NUP35Q8NFH5 326 aa11.86□□□□□ -0.51
LITAF-212ENST00000573332 ATP6V0E2Q8NHE4 81 aa11.86□□□□□ -0.51
LITAF-212ENST00000573332 Q9H8V8 135 aa11.86□□□□□ -0.51
LITAF-212ENST00000573332 NAT8BQ9UHF3 227 aa11.86□□□□□ -0.51
LITAF-212ENST00000573332 HYDINQ4G0P3 5121 aa11.85□□□□□ -0.51
LITAF-212ENST00000573332 GAGE12JA6NER3 117 aa11.85□□□□□ -0.51
LITAF-212ENST00000573332 F5H697 171 aa11.85□□□□□ -0.51
LITAF-212ENST00000573332 ADCYAP1P18509 176 aa11.85□□□□□ -0.51
LITAF-212ENST00000573332 GAGE1Q13065 139 aa11.85□□□□□ -0.51
LITAF-212ENST00000573332 GAGE4Q13068 117 aa11.85□□□□□ -0.51
LITAF-212ENST00000573332 GAGE5Q13069 117 aa11.85□□□□□ -0.51
LITAF-212ENST00000573332 GAGE13Q4V321 117 aa11.85□□□□□ -0.51
LITAF-212ENST00000573332 SEC11CQ9BY50 192 aa11.85□□□□□ -0.51
LITAF-212ENST00000573332 TRBV7-3A0A075B6L6 115 aa11.84□□□□□ -0.51
LITAF-212ENST00000573332 F8W036 122 aa11.84□□□□□ -0.51
LITAF-212ENST00000573332 RPL36AP83881 106 aaKnown RBP11.84□□□□□ -0.51
LITAF-212ENST00000573332 Q6ZR54 194 aa11.84□□□□□ -0.51
LITAF-212ENST00000573332 SMIM15Q7Z3B0 74 aa11.84□□□□□ -0.51
LITAF-212ENST00000573332 RPL36ALQ969Q0 106 aaKnown RBP11.84□□□□□ -0.51
LITAF-212ENST00000573332 ANAPC16Q96DE5 110 aa11.84□□□□□ -0.51
LITAF-212ENST00000573332 GTSF1LQ9H1H1 148 aa11.84□□□□□ -0.51
LITAF-212ENST00000573332 KMT2AQ03164 3969 aa11.83□□□□□ -0.52
LITAF-212ENST00000573332 DNAH6Q9C0G6 4158 aa11.83□□□□□ -0.52
LITAF-212ENST00000573332 H7C1H1 209 aa11.83□□□□□ -0.52
LITAF-212ENST00000573332 M0QY20 66 aa11.83□□□□□ -0.52
LITAF-212ENST00000573332 MT-ND4LP03901 98 aa11.83□□□□□ -0.52
LITAF-212ENST00000573332 MGPP08493 103 aa11.83□□□□□ -0.52
LITAF-212ENST00000573332 NEXN-AS1Q8NBZ9 246 aa11.83□□□□□ -0.52
LITAF-212ENST00000573332 IGLV2-18A0A075B6J9 118 aa11.82□□□□□ -0.52
LITAF-212ENST00000573332 UBE2D3P61077 147 aa11.82□□□□□ -0.52
LITAF-212ENST00000573332 UBE2D2P62837 147 aa11.82□□□□□ -0.52
LITAF-212ENST00000573332 RIGQ13278 110 aa11.82□□□□□ -0.52
LITAF-212ENST00000573332 C10orf91Q5T1B1 145 aa11.82□□□□□ -0.52
LITAF-212ENST00000573332 SUMO4Q6EEV6 95 aa11.82□□□□□ -0.52
LITAF-212ENST00000573332 TMEM191AQ9H0A3 160 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms