RNA–Protein interactions for RNA: ENST00000573169.1

NUP88-206, Transcript of nucleoporin 88, humanhuman

TSL 1 (best)

Gene NUP88, Length 1,195 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-206ENST00000573169 SPAG8Q99932 426 aaPredicted RBP5.03□□□□□ -1.6
NUP88-206ENST00000573169 VCX2Q9H322 139 aa5.03□□□□□ -1.6
NUP88-206ENST00000573169 M0QXV9 152 aa5.02□□□□□ -1.61
NUP88-206ENST00000573169 CD28P10747 220 aa5.02□□□□□ -1.61
NUP88-206ENST00000573169 CNTFRP26992 372 aa5.02□□□□□ -1.61
NUP88-206ENST00000573169 RAB9AP51151 201 aa5.02□□□□□ -1.61
NUP88-206ENST00000573169 ZNF80P51504 273 aaPredicted RBP5.02□□□□□ -1.61
NUP88-206ENST00000573169 MFAP4P55083 255 aa5.02□□□□□ -1.61
NUP88-206ENST00000573169 RPL24P83731 157 aaKnown RBP5.02□□□□□ -1.61
NUP88-206ENST00000573169 BEAN1Q3B7T3 259 aa5.02□□□□□ -1.61
NUP88-206ENST00000573169 GAGE13Q4V321 117 aa5.02□□□□□ -1.61
NUP88-206ENST00000573169 TMEM219Q86XT9 240 aa5.02□□□□□ -1.61
NUP88-206ENST00000573169 SBSPONQ8IVN8 264 aa5.02□□□□□ -1.61
NUP88-206ENST00000573169 NRACQ8N912 160 aa5.02□□□□□ -1.61
NUP88-206ENST00000573169 LINC01600Q96MT4 127 aa5.02□□□□□ -1.61
NUP88-206ENST00000573169 ASCL2Q99929 193 aa5.02□□□□□ -1.61
NUP88-206ENST00000573169 NAA38Q9BRA0 125 aaKnown RBP5.02□□□□□ -1.61
NUP88-206ENST00000573169 TSSC4Q9Y5U2 329 aaPredicted RBP5.02□□□□□ -1.61
NUP88-206ENST00000573169 WNK1Q9H4A3 2382 aa5.01□□□□□ -1.61
NUP88-206ENST00000573169 NOTCH1P46531 2555 aa5.01□□□□□ -1.61
NUP88-206ENST00000573169 H3BMG7 143 aa5.01□□□□□ -1.61
NUP88-206ENST00000573169 IL4P05112 153 aa5.01□□□□□ -1.61
NUP88-206ENST00000573169 PRSS1P07477 247 aa5.01□□□□□ -1.61
NUP88-206ENST00000573169 LAGE3Q14657 143 aa5.01□□□□□ -1.61
NUP88-206ENST00000573169 NSUN5P1Q3KNT7 163 aa5.01□□□□□ -1.61
NUP88-206ENST00000573169 ZC2HC1BQ5TFG8 222 aa5.01□□□□□ -1.61
NUP88-206ENST00000573169 CCDC144NLQ6NUI1 221 aa5.01□□□□□ -1.61
NUP88-206ENST00000573169 MAPKAPK5-AS1Q8N8E1 139 aa5.01□□□□□ -1.61
NUP88-206ENST00000573169 OR11H6Q8NGC7 330 aa5.01□□□□□ -1.61
NUP88-206ENST00000573169 MYOZ3Q8TDC0 251 aa5.01□□□□□ -1.61
NUP88-206ENST00000573169 CFHR4Q92496 578 aa5.01□□□□□ -1.61
NUP88-206ENST00000573169 MRAP2Q96G30 205 aa5.01□□□□□ -1.61
NUP88-206ENST00000573169 FBXL15Q9H469 300 aa5.01□□□□□ -1.61
NUP88-206ENST00000573169 ZNF702PQ9H963 129 aa5.01□□□□□ -1.61
NUP88-206ENST00000573169 NHP2Q9NX24 153 aaKnown RBP5.01□□□□□ -1.61
NUP88-206ENST00000573169 PLA2G2DQ9UNK4 145 aa5.01□□□□□ -1.61
NUP88-206ENST00000573169 SMAD5-AS1Q9Y6J3 95 aa5.01□□□□□ -1.61
NUP88-206ENST00000573169 IGHV3-21A0A0B4J1V1 117 aa5□□□□□ -1.61
NUP88-206ENST00000573169 IGHV3-72A0A0B4J1Y9 119 aa5□□□□□ -1.61
NUP88-206ENST00000573169 A6NDX4 124 aa5□□□□□ -1.61
NUP88-206ENST00000573169 LINC01549A6NIU2 74 aa5□□□□□ -1.61
NUP88-206ENST00000573169 OOSP1A8MZH6 123 aa5□□□□□ -1.61
NUP88-206ENST00000573169 F8VRH5 84 aa5□□□□□ -1.61
NUP88-206ENST00000573169 SMKR1H3BMG3 65 aa5□□□□□ -1.61
NUP88-206ENST00000573169 H7C1H1 209 aa5□□□□□ -1.61
NUP88-206ENST00000573169 GNG7O60262 68 aa5□□□□□ -1.61
NUP88-206ENST00000573169 SCGB2A1O75556 95 aa5□□□□□ -1.61
NUP88-206ENST00000573169 UBE2D1P51668 147 aa5□□□□□ -1.61
NUP88-206ENST00000573169 RPL32P62910 135 aaKnown RBP5□□□□□ -1.61
NUP88-206ENST00000573169 BLCAPP62952 87 aa5□□□□□ -1.61
NUP88-206ENST00000573169 EBI3Q14213 229 aa5□□□□□ -1.61
NUP88-206ENST00000573169 TMEM95Q3KNT9 176 aa5□□□□□ -1.61
NUP88-206ENST00000573169 MORN3Q6PF18 240 aaPredicted RBP5□□□□□ -1.61
NUP88-206ENST00000573169 GTSCR1Q86UQ5 136 aa5□□□□□ -1.61
NUP88-206ENST00000573169 LINC00482Q8N8I6 264 aa5□□□□□ -1.61
NUP88-206ENST00000573169 TPPP3Q9BW30 176 aa5□□□□□ -1.61
NUP88-206ENST00000573169 GTSF1LQ9H1H1 148 aa5□□□□□ -1.61
NUP88-206ENST00000573169 MRPL35Q9NZE8 188 aaKnown RBP5□□□□□ -1.61
NUP88-206ENST00000573169 TIMM8BQ9Y5J9 83 aaPredicted RBP5□□□□□ -1.61
NUP88-206ENST00000573169 LENEPQ9Y5L5 61 aa5□□□□□ -1.61
NUP88-206ENST00000573169 IGKV2-40A0A087WW87 121 aaPredicted RBP4.99□□□□□ -1.61
NUP88-206ENST00000573169 MYMXA0A1B0GTQ4 84 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 A0A1W2PRX2 142 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 ODF3BA8MYP8 253 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.99□□□□□ -1.61
NUP88-206ENST00000573169 K7ERJ3 54 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 M0R381 172 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 NBR2O15453 112 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 IGKV2D-40P01614 121 aaPredicted RBP4.99□□□□□ -1.61
NUP88-206ENST00000573169 UBE2D3P61077 147 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 UBE2D2P62837 147 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 SMAGPQ0VAQ4 97 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 FOXI1Q12951 378 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 C5orf64Q2M2E5 130 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 KPRPQ5T749 579 aaPredicted RBP4.99□□□□□ -1.61
NUP88-206ENST00000573169 CFAP126Q5VTH2 177 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 Q8N6K4 173 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 POM121L12Q8N7R1 296 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 RPEQ96AT9 228 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 TOMM6Q96B49 74 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 C16orf92Q96LL3 132 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 CITED2Q99967 270 aaPredicted RBP4.99□□□□□ -1.61
NUP88-206ENST00000573169 C20orf78Q9BR46 151 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 SLC50A1Q9BRV3 221 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 C1QTNF4Q9BXJ3 329 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 MRPL16Q9NX20 251 aaKnown RBP4.99□□□□□ -1.61
NUP88-206ENST00000573169 C21orf62Q9NYP8 219 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 MSRB1Q9NZV6 116 aa4.99□□□□□ -1.61
NUP88-206ENST00000573169 DNAH3Q8TD57 4116 aa4.98□□□□□ -1.61
NUP88-206ENST00000573169 TMSB15BA0A087X1C1 80 aa4.98□□□□□ -1.61
NUP88-206ENST00000573169 IGKV3D-20A0A0C4DH25 116 aa4.98□□□□□ -1.61
NUP88-206ENST00000573169 IGHV7-4-1A0A0J9YVY3 117 aa4.98□□□□□ -1.61
NUP88-206ENST00000573169 NCBP2LA6PVI3 153 aaKnown RBP4.98□□□□□ -1.61
NUP88-206ENST00000573169 GAS8-AS1O95177 125 aa4.98□□□□□ -1.61
NUP88-206ENST00000573169 TSPAN13O95857 204 aa4.98□□□□□ -1.61
NUP88-206ENST00000573169 CTSGP08311 255 aa4.98□□□□□ -1.61
NUP88-206ENST00000573169 CRYBA4P53673 196 aa4.98□□□□□ -1.61
NUP88-206ENST00000573169 FXYD7P58549 80 aa4.98□□□□□ -1.61
NUP88-206ENST00000573169 CKS1BP61024 79 aa4.98□□□□□ -1.61
NUP88-206ENST00000573169 ERCC8Q13216 396 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms