RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 IGLC6P0CF74 106 aa12.26□□□□□ -0.45
RAB40B-206ENST00000571995 COX8AP10176 69 aa12.26□□□□□ -0.45
RAB40B-206ENST00000571995 SDHAF1A6NFY7 115 aa12.26□□□□□ -0.45
RAB40B-206ENST00000571995 STHQ8IWL8 128 aa12.26□□□□□ -0.45
RAB40B-206ENST00000571995 TRGV1A0A0A0MS02 117 aa12.26□□□□□ -0.45
RAB40B-206ENST00000571995 RNF185Q96GF1 192 aa12.26□□□□□ -0.45
RAB40B-206ENST00000571995 IGKV2D-26A0A0A0MRZ7 120 aa12.25□□□□□ -0.45
RAB40B-206ENST00000571995 CD5LO43866 347 aa12.25□□□□□ -0.45
RAB40B-206ENST00000571995 DSCR9P59020 149 aa12.25□□□□□ -0.45
RAB40B-206ENST00000571995 ZNF815PA8K554 130 aa12.25□□□□□ -0.45
RAB40B-206ENST00000571995 P0DMU3 169 aa12.25□□□□□ -0.45
RAB40B-206ENST00000571995 FAM231AP0DMU4 169 aa12.25□□□□□ -0.45
RAB40B-206ENST00000571995 FAM231CP0DMU5 169 aa12.25□□□□□ -0.45
RAB40B-206ENST00000571995 DEFB113Q30KQ7 82 aa12.25□□□□□ -0.45
RAB40B-206ENST00000571995 LINC01559Q495D7 138 aa12.25□□□□□ -0.45
RAB40B-206ENST00000571995 SPCS1Q9Y6A9 102 aa12.25□□□□□ -0.45
RAB40B-206ENST00000571995 PSMB2P49721 201 aa12.25□□□□□ -0.45
RAB40B-206ENST00000571995 SMIM2Q9BVW6 85 aa12.25□□□□□ -0.45
RAB40B-206ENST00000571995 Q8N1Y9 231 aa12.24□□□□□ -0.45
RAB40B-206ENST00000571995 Q8N8P6 123 aa12.24□□□□□ -0.45
RAB40B-206ENST00000571995 SCRT2Q9NQ03 307 aa12.24□□□□□ -0.45
RAB40B-206ENST00000571995 MRPL16Q9NX20 251 aaKnown RBP12.24□□□□□ -0.45
RAB40B-206ENST00000571995 PF4P02776 101 aa12.24□□□□□ -0.45
RAB40B-206ENST00000571995 UBE2V1Q13404 147 aa12.24□□□□□ -0.45
RAB40B-206ENST00000571995 DUSP14O95147 198 aaKnown RBP12.23□□□□□ -0.45
RAB40B-206ENST00000571995 CDKN1BP46527 198 aa12.23□□□□□ -0.45
RAB40B-206ENST00000571995 TMEM61Q8N0U2 210 aa12.23□□□□□ -0.45
RAB40B-206ENST00000571995 ZNF625Q96I27 306 aaPredicted RBP12.23□□□□□ -0.45
RAB40B-206ENST00000571995 ZNF48Q96MX3 618 aaPredicted RBP12.23□□□□□ -0.45
RAB40B-206ENST00000571995 TRGV2A0A075B6R0 118 aa12.23□□□□□ -0.45
RAB40B-206ENST00000571995 FABP2P12104 132 aa12.23□□□□□ -0.45
RAB40B-206ENST00000571995 CHAC1Q9BUX1 264 aa12.23□□□□□ -0.45
RAB40B-206ENST00000571995 SMIM13P0DJ93 91 aa12.22□□□□□ -0.45
RAB40B-206ENST00000571995 FOSL1P15407 271 aa12.22□□□□□ -0.45
RAB40B-206ENST00000571995 ZFAND2AQ8N6M9 145 aa12.22□□□□□ -0.45
RAB40B-206ENST00000571995 A0A096LNJ9 63 aa12.22□□□□□ -0.45
RAB40B-206ENST00000571995 HTN3P15516 51 aa12.22□□□□□ -0.45
RAB40B-206ENST00000571995 GTF2H5Q6ZYL4 71 aa12.22□□□□□ -0.45
RAB40B-206ENST00000571995 SMR3AQ99954 134 aa12.22□□□□□ -0.45
RAB40B-206ENST00000571995 NOTCH1P46531 2555 aa12.22□□□□□ -0.45
RAB40B-206ENST00000571995 RRN3P1Q2M238 152 aa12.22□□□□□ -0.45
RAB40B-206ENST00000571995 AMTNQ6UX39 209 aa12.22□□□□□ -0.45
RAB40B-206ENST00000571995 SPXQ9BT56 116 aa12.22□□□□□ -0.45
RAB40B-206ENST00000571995 PCP4P48539 62 aa12.21□□□□□ -0.45
RAB40B-206ENST00000571995 HERVK_113P61574 105 aa12.21□□□□□ -0.45
RAB40B-206ENST00000571995 LGALS9BQ3B8N2 356 aa12.21□□□□□ -0.45
RAB40B-206ENST00000571995 LGALS9CQ6DKI2 356 aa12.21□□□□□ -0.45
RAB40B-206ENST00000571995 C9orf47Q6ZRZ4 202 aa12.21□□□□□ -0.45
RAB40B-206ENST00000571995 GATD1Q8NB37 220 aa12.21□□□□□ -0.45
RAB40B-206ENST00000571995 ZNF418Q8TF45 676 aaPredicted RBP12.21□□□□□ -0.45
RAB40B-206ENST00000571995 ORMDL2Q53FV1 153 aa12.21□□□□□ -0.46
RAB40B-206ENST00000571995 CEMP1Q6PRD7 247 aaPredicted RBP12.21□□□□□ -0.46
RAB40B-206ENST00000571995 ZNF493Q6ZR52 646 aa12.2□□□□□ -0.46
RAB40B-206ENST00000571995 VCX2Q9H322 139 aa12.2□□□□□ -0.46
RAB40B-206ENST00000571995 PEMTQ9UBM1 199 aa12.2□□□□□ -0.46
RAB40B-206ENST00000571995 LGALS3P17931 250 aaKnown RBP12.2□□□□□ -0.46
RAB40B-206ENST00000571995 PROK1P58294 105 aa12.2□□□□□ -0.46
RAB40B-206ENST00000571995 MEGF9Q9H1U4 602 aa12.2□□□□□ -0.46
RAB40B-206ENST00000571995 IGHV1OR15-1A0A075B7D0 117 aa12.2□□□□□ -0.46
RAB40B-206ENST00000571995 PRSS29PA6NIE9 313 aa12.2□□□□□ -0.46
RAB40B-206ENST00000571995 RNASE8Q8TDE3 154 aaKnown RBP12.19□□□□□ -0.46
RAB40B-206ENST00000571995 DLX4Q92988 240 aaPredicted RBP12.19□□□□□ -0.46
RAB40B-206ENST00000571995 APCP25054 2843 aa12.19□□□□□ -0.46
RAB40B-206ENST00000571995 TRAV2A0A0B4J234 112 aa12.19□□□□□ -0.46
RAB40B-206ENST00000571995 CD28P10747 220 aa12.19□□□□□ -0.46
RAB40B-206ENST00000571995 GATA3P23771 443 aa12.19□□□□□ -0.46
RAB40B-206ENST00000571995 FXYD2P54710 66 aa12.19□□□□□ -0.46
RAB40B-206ENST00000571995 DEFB130BP0DP73 79 aa12.19□□□□□ -0.46
RAB40B-206ENST00000571995 DEFB130AP0DP74 79 aa12.19□□□□□ -0.46
RAB40B-206ENST00000571995 TOMM7Q9P0U1 55 aa12.19□□□□□ -0.46
RAB40B-206ENST00000571995 TAX1BP3O14907 124 aa12.18□□□□□ -0.46
RAB40B-206ENST00000571995 HSD52Q0P140 79 aa12.18□□□□□ -0.46
RAB40B-206ENST00000571995 LINC01619G3V211 115 aa12.18□□□□□ -0.46
RAB40B-206ENST00000571995 IGHV4-31P0DP07 118 aa12.18□□□□□ -0.46
RAB40B-206ENST00000571995 ODF1Q14990 250 aa12.18□□□□□ -0.46
RAB40B-206ENST00000571995 GAGE12BA1L429 117 aa12.18□□□□□ -0.46
RAB40B-206ENST00000571995 CBY1Q9Y3M2 126 aa12.18□□□□□ -0.46
RAB40B-206ENST00000571995 GEMIN7Q9H840 131 aaKnown RBP12.17□□□□□ -0.46
RAB40B-206ENST00000571995 NIPBLQ6KC79 2804 aaeCLIP12.17□□□□□ -0.46
RAB40B-206ENST00000571995 LGALS1P09382 135 aaKnown RBP12.17□□□□□ -0.46
RAB40B-206ENST00000571995 SUMO4Q6EEV6 95 aa12.17□□□□□ -0.46
RAB40B-206ENST00000571995 A0A096LPF7 62 aa12.17□□□□□ -0.46
RAB40B-206ENST00000571995 TRBV6-1A0A0K0K1D8 114 aa12.17□□□□□ -0.46
RAB40B-206ENST00000571995 RBAKDNA6NC62 111 aa12.17□□□□□ -0.46
RAB40B-206ENST00000571995 SAMD5Q5TGI4 173 aa12.16□□□□□ -0.46
RAB40B-206ENST00000571995 RASL10AQ92737 203 aa12.16□□□□□ -0.46
RAB40B-206ENST00000571995 PRADC1Q9BSG0 188 aa12.16□□□□□ -0.46
RAB40B-206ENST00000571995 TRBV25-1A0A075B6N4 114 aa12.16□□□□□ -0.46
RAB40B-206ENST00000571995 TRAV13-1A0A0B4J241 112 aa12.16□□□□□ -0.46
RAB40B-206ENST00000571995 H7C1H1 209 aa12.16□□□□□ -0.46
RAB40B-206ENST00000571995 CIDEAO60543 219 aa12.16□□□□□ -0.46
RAB40B-206ENST00000571995 WFDC10AQ9H1F0 79 aa12.16□□□□□ -0.46
RAB40B-206ENST00000571995 GPHB5Q86YW7 130 aa12.15□□□□□ -0.46
RAB40B-206ENST00000571995 VCYO14598 125 aa12.15□□□□□ -0.46
RAB40B-206ENST00000571995 C11orf68Q9H3H3 251 aaKnown RBP12.15□□□□□ -0.46
RAB40B-206ENST00000571995 ESM1Q9NQ30 184 aa12.15□□□□□ -0.46
RAB40B-206ENST00000571995 TMEM262E9PQX1 116 aa12.15□□□□□ -0.46
RAB40B-206ENST00000571995 CITED2Q99967 270 aaPredicted RBP12.15□□□□□ -0.46
RAB40B-206ENST00000571995 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.14□□□□□ -0.47
RAB40B-206ENST00000571995 IGKV2-29A2NJV5 120 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms