RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 FAM74A4Q5TZK3 123 aa9.28□□□□□ -0.92
CCDC40-205ENST00000571028 CFAP126Q5VTH2 177 aa9.28□□□□□ -0.92
CCDC40-205ENST00000571028 ZFP82Q8N141 532 aa9.28□□□□□ -0.92
CCDC40-205ENST00000571028 C18orf15Q96N68 181 aa9.28□□□□□ -0.92
CCDC40-205ENST00000571028 HERC1Q15751 4861 aa9.28□□□□□ -0.92
CCDC40-205ENST00000571028 A0A087WWL8 130 aa9.27□□□□□ -0.93
CCDC40-205ENST00000571028 LYZL1Q6UWQ5 148 aa9.27□□□□□ -0.93
CCDC40-205ENST00000571028 FAM231DQ6ZW35 169 aa9.27□□□□□ -0.93
CCDC40-205ENST00000571028 C15orf54Q8N8G6 183 aa9.27□□□□□ -0.93
CCDC40-205ENST00000571028 PTH2Q96A98 100 aa9.27□□□□□ -0.93
CCDC40-205ENST00000571028 ISOC2Q96AB3 205 aa9.27□□□□□ -0.93
CCDC40-205ENST00000571028 SAMD10Q9BYL1 202 aa9.27□□□□□ -0.93
CCDC40-205ENST00000571028 HHLA3Q9XRX5 114 aa9.27□□□□□ -0.93
CCDC40-205ENST00000571028 A8MWV9 139 aa9.26□□□□□ -0.93
CCDC40-205ENST00000571028 SNAI2O43623 268 aa9.26□□□□□ -0.93
CCDC40-205ENST00000571028 RNF212Q495C1 297 aa9.26□□□□□ -0.93
CCDC40-205ENST00000571028 OR10G8Q8NGN5 311 aa9.26□□□□□ -0.93
CCDC40-205ENST00000571028 FAM210BQ96KR6 192 aa9.26□□□□□ -0.93
CCDC40-205ENST00000571028 A8MWL6 223 aa9.25□□□□□ -0.93
CCDC40-205ENST00000571028 OR5AL1P0C617 328 aa9.25□□□□□ -0.93
CCDC40-205ENST00000571028 IGLC6P0CF74 106 aa9.25□□□□□ -0.93
CCDC40-205ENST00000571028 CRYBA4P53673 196 aa9.25□□□□□ -0.93
CCDC40-205ENST00000571028 TNP2Q05952 138 aa9.25□□□□□ -0.93
CCDC40-205ENST00000571028 UQCC3Q6UW78 93 aa9.25□□□□□ -0.93
CCDC40-205ENST00000571028 SFRP2Q96HF1 295 aa9.25□□□□□ -0.93
CCDC40-205ENST00000571028 VSIG2Q96IQ7 327 aa9.25□□□□□ -0.93
CCDC40-205ENST00000571028 PGLYRP4Q96LB8 373 aa9.25□□□□□ -0.93
CCDC40-205ENST00000571028 SSBP4Q9BWG4 385 aaPredicted RBP9.25□□□□□ -0.93
CCDC40-205ENST00000571028 OSTCQ9NRP0 149 aa9.25□□□□□ -0.93
CCDC40-205ENST00000571028 PRO0255Q9UI72 69 aa9.25□□□□□ -0.93
CCDC40-205ENST00000571028 A0A096LPF7 62 aa9.24□□□□□ -0.93
CCDC40-205ENST00000571028 LOC100131303A0A0U1RQF7 123 aa9.24□□□□□ -0.93
CCDC40-205ENST00000571028 A0A1W2PPQ1 181 aa9.24□□□□□ -0.93
CCDC40-205ENST00000571028 LINC00862A6NCI5 91 aa9.24□□□□□ -0.93
CCDC40-205ENST00000571028 F8W036 122 aa9.24□□□□□ -0.93
CCDC40-205ENST00000571028 SLAQ13239 276 aa9.24□□□□□ -0.93
CCDC40-205ENST00000571028 C14orf178Q8N769 122 aaPredicted RBP9.24□□□□□ -0.93
CCDC40-205ENST00000571028 C15orf53Q8NAA6 179 aa9.24□□□□□ -0.93
CCDC40-205ENST00000571028 MSRB1Q9NZV6 116 aa9.24□□□□□ -0.93
CCDC40-205ENST00000571028 TMEM218A2RU14 115 aa9.23□□□□□ -0.93
CCDC40-205ENST00000571028 F2Z2F3 143 aa9.23□□□□□ -0.93
CCDC40-205ENST00000571028 GYPEP15421 78 aa9.23□□□□□ -0.93
CCDC40-205ENST00000571028 CACNG7P62955 275 aa9.23□□□□□ -0.93
CCDC40-205ENST00000571028 TWIST1Q15672 202 aa9.23□□□□□ -0.93
CCDC40-205ENST00000571028 Q6ZSN1 163 aa9.23□□□□□ -0.93
CCDC40-205ENST00000571028 GTSF1Q8WW33 167 aa9.23□□□□□ -0.93
CCDC40-205ENST00000571028 V9GYV3 84 aa9.23□□□□□ -0.93
CCDC40-205ENST00000571028 F5H697 171 aa9.22□□□□□ -0.93
CCDC40-205ENST00000571028 CRYGDP07320 174 aa9.22□□□□□ -0.93
CCDC40-205ENST00000571028 MGPP08493 103 aa9.22□□□□□ -0.93
CCDC40-205ENST00000571028 SMIM17P0DL12 118 aa9.22□□□□□ -0.93
CCDC40-205ENST00000571028 GATA1P15976 413 aaPredicted RBP9.22□□□□□ -0.93
CCDC40-205ENST00000571028 NTF3P20783 257 aa9.22□□□□□ -0.93
CCDC40-205ENST00000571028 ZNF56Q15929 161 aa9.22□□□□□ -0.93
CCDC40-205ENST00000571028 PIK3CD-AS1Q5SR53 167 aa9.22□□□□□ -0.93
CCDC40-205ENST00000571028 TSKUQ8WUA8 353 aa9.22□□□□□ -0.93
CCDC40-205ENST00000571028 ICOSQ9Y6W8 199 aa9.22□□□□□ -0.93
CCDC40-205ENST00000571028 RHODO00212 210 aa9.21□□□□□ -0.94
CCDC40-205ENST00000571028 CIDEAO60543 219 aa9.21□□□□□ -0.94
CCDC40-205ENST00000571028 NXPH4O95158 308 aa9.21□□□□□ -0.94
CCDC40-205ENST00000571028 ADCYAP1P18509 176 aa9.21□□□□□ -0.94
CCDC40-205ENST00000571028 CT83Q5H943 113 aa9.21□□□□□ -0.94
CCDC40-205ENST00000571028 SLC25A29Q8N8R3 303 aa9.21□□□□□ -0.94
CCDC40-205ENST00000571028 BORCS7Q96B45 105 aa9.21□□□□□ -0.94
CCDC40-205ENST00000571028 AP1S3Q96PC3 154 aa9.21□□□□□ -0.94
CCDC40-205ENST00000571028 PRADC1Q9BSG0 188 aa9.21□□□□□ -0.94
CCDC40-205ENST00000571028 DMBT1Q9UGM3 2413 aaPredicted RBP9.21□□□□□ -0.94
CCDC40-205ENST00000571028 GAGE12JA6NER3 117 aa9.2□□□□□ -0.94
CCDC40-205ENST00000571028 HIGD1CA8MV81 97 aa9.2□□□□□ -0.94
CCDC40-205ENST00000571028 EPM2AB3EWF7 344 aa9.2□□□□□ -0.94
CCDC40-205ENST00000571028 CTRLP40313 264 aa9.2□□□□□ -0.94
CCDC40-205ENST00000571028 FAM3BP58499 235 aaPredicted RBP9.2□□□□□ -0.94
CCDC40-205ENST00000571028 GAGE1Q13065 139 aa9.2□□□□□ -0.94
CCDC40-205ENST00000571028 GAGE4Q13068 117 aa9.2□□□□□ -0.94
CCDC40-205ENST00000571028 GAGE5Q13069 117 aa9.2□□□□□ -0.94
CCDC40-205ENST00000571028 GAGE13Q4V321 117 aa9.2□□□□□ -0.94
CCDC40-205ENST00000571028 UFSP1Q6NVU6 142 aa9.2□□□□□ -0.94
CCDC40-205ENST00000571028 ZFP2Q6ZN57 461 aa9.2□□□□□ -0.94
CCDC40-205ENST00000571028 C6orf223Q8N319 242 aa9.2□□□□□ -0.94
CCDC40-205ENST00000571028 NACAE9PAV3 2078 aa9.19□□□□□ -0.94
CCDC40-205ENST00000571028 H3BNG1 76 aa9.19□□□□□ -0.94
CCDC40-205ENST00000571028 K7EQD1 137 aa9.19□□□□□ -0.94
CCDC40-205ENST00000571028 TRGC1P0CF51 173 aa9.19□□□□□ -0.94
CCDC40-205ENST00000571028 EVI2AP22794 236 aa9.19□□□□□ -0.94
CCDC40-205ENST00000571028 SRIP30626 198 aa9.19□□□□□ -0.94
CCDC40-205ENST00000571028 PNRC1Q12796 327 aaPredicted RBP9.19□□□□□ -0.94
CCDC40-205ENST00000571028 RHOHQ15669 191 aa9.19□□□□□ -0.94
CCDC40-205ENST00000571028 MRPL23Q16540 153 aaKnown RBP9.19□□□□□ -0.94
CCDC40-205ENST00000571028 SPATA12Q7Z6I5 190 aa9.19□□□□□ -0.94
CCDC40-205ENST00000571028 TRBV6-4A0A1B0GX49 114 aa9.18□□□□□ -0.94
CCDC40-205ENST00000571028 INAFM2P0DMQ5 153 aa9.18□□□□□ -0.94
CCDC40-205ENST00000571028 GFRA4Q9GZZ7 299 aa9.18□□□□□ -0.94
CCDC40-205ENST00000571028 LRP1BQ9NZR2 4599 aa9.18□□□□□ -0.94
CCDC40-205ENST00000571028 Q9UF83 564 aa9.18□□□□□ -0.94
CCDC40-205ENST00000571028 PPP1R2P9O14990 202 aa9.17□□□□□ -0.94
CCDC40-205ENST00000571028 MT-ND4LP03901 98 aa9.17□□□□□ -0.94
CCDC40-205ENST00000571028 FOXA3P55318 350 aaPredicted RBP9.17□□□□□ -0.94
CCDC40-205ENST00000571028 CCL18P55774 89 aa9.17□□□□□ -0.94
CCDC40-205ENST00000571028 ESRGQ1W209 222 aa9.17□□□□□ -0.94
CCDC40-205ENST00000571028 WDR73Q6P4I2 378 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms