RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 TRAV1-1A0A0B4J248 108 aa3.63□□□□□ -1.83
CHD3-212ENST00000570758 TRAV8-6A0A0B4J262 113 aa3.63□□□□□ -1.83
CHD3-212ENST00000570758 IBA57-AS1B1ANH7 110 aa3.63□□□□□ -1.83
CHD3-212ENST00000570758 M0R381 172 aa3.63□□□□□ -1.83
CHD3-212ENST00000570758 CDK2AP2O75956 126 aa3.63□□□□□ -1.83
CHD3-212ENST00000570758 CXCL1P09341 107 aa3.63□□□□□ -1.83
CHD3-212ENST00000570758 SULT1A2P50226 295 aa3.63□□□□□ -1.83
CHD3-212ENST00000570758 ERVFC1-1P60608 527 aa3.63□□□□□ -1.83
CHD3-212ENST00000570758 OR10J3Q5JRS4 329 aa3.63□□□□□ -1.83
CHD3-212ENST00000570758 FAM74A4Q5TZK3 123 aa3.63□□□□□ -1.83
CHD3-212ENST00000570758 ZFP82Q8N141 532 aa3.63□□□□□ -1.83
CHD3-212ENST00000570758 SYT8Q8NBV8 401 aa3.63□□□□□ -1.83
CHD3-212ENST00000570758 C11orf52Q96A22 123 aa3.63□□□□□ -1.83
CHD3-212ENST00000570758 DERL1Q9BUN8 251 aa3.63□□□□□ -1.83
CHD3-212ENST00000570758 PHLDA3Q9Y5J5 127 aa3.63□□□□□ -1.83
CHD3-212ENST00000570758 hCG_2014768A0A024R1R8 64 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 MUC21A0A0G2JKD1 596 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 MUC21A0A140T8X8 626 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 RAB19A4D1S5 217 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 LRCOL1A6NCL2 159 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 K7EP13 123 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 RHODO00212 210 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 EREGO14944 169 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 IGLV2-8P01709 118 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 C1QBP02746 253 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 RPL35P42766 123 aaKnown RBP3.62□□□□□ -1.83
CHD3-212ENST00000570758 RAB5CP51148 216 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 KRTAP10-1P60331 282 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 CENPWQ5EE01 88 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 PRR27Q6MZM9 219 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 SLC51BQ86UW2 128 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 C10orf126Q8N4M7 172 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 OR10AG1Q8NH19 301 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 Q9HAA7 133 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 MANBALQ9NQG1 85 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 PGPEP1Q9NXJ5 209 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 ABCA13Q86UQ4 5058 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 DNAH8Q96JB1 4490 aa3.62□□□□□ -1.83
CHD3-212ENST00000570758 RBFOX3A6NFN3 312 aa3.61□□□□□ -1.83
CHD3-212ENST00000570758 SNAI2O43623 268 aa3.61□□□□□ -1.83
CHD3-212ENST00000570758 GZMBP10144 247 aa3.61□□□□□ -1.83
CHD3-212ENST00000570758 SSTP61278 116 aa3.61□□□□□ -1.83
CHD3-212ENST00000570758 WFDC2Q14508 124 aa3.61□□□□□ -1.83
CHD3-212ENST00000570758 EIF5AL1Q6IS14 154 aaKnown RBP3.61□□□□□ -1.83
CHD3-212ENST00000570758 DAZ4Q86SG3 579 aaKnown RBP3.61□□□□□ -1.83
CHD3-212ENST00000570758 C9orf62Q8N4C0 152 aa3.61□□□□□ -1.83
CHD3-212ENST00000570758 MAPKAPK5-AS1Q8N8E1 139 aa3.61□□□□□ -1.83
CHD3-212ENST00000570758 DNAJC30Q96LL9 226 aa3.61□□□□□ -1.83
CHD3-212ENST00000570758 SSBP4Q9BWG4 385 aaPredicted RBP3.61□□□□□ -1.83
CHD3-212ENST00000570758 DAZ3Q9NR90 486 aaKnown RBP3.61□□□□□ -1.83
CHD3-212ENST00000570758 TRBV20OR9-2A0A075B6H5 130 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 A0A087WWC5 75 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 TRBV10-1A0A0K0K1A3 114 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 C19orf71A6NCJ1 209 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 TEX46H3BTG2 121 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 PSCAO43653 123 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 OR5AL1P0C617 328 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 BCL2P10415 239 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 XGP55808 180 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 RAB4BP61018 213 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 UBE2D3P61077 147 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 UBE2D2P62837 147 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 MEF2BQ02080 365 aaPredicted RBP3.6□□□□□ -1.83
CHD3-212ENST00000570758 ZNF56Q15929 161 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 SPANXN1Q5VSR9 72 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 CDPF1Q6NVV7 123 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 AKAP14Q86UN6 197 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 Q8N1X5 172 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 NEXN-AS1Q8NBZ9 246 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 OR10G8Q8NGN5 311 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 VAX2Q9UIW0 290 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 KIF25-AS1Q9Y6Z4 181 aa3.6□□□□□ -1.83
CHD3-212ENST00000570758 TRBV7-3A0A075B6L6 115 aa3.59□□□□□ -1.83
CHD3-212ENST00000570758 PDE6DO43924 150 aa3.59□□□□□ -1.83
CHD3-212ENST00000570758 IFNA1P01562 189 aa3.59□□□□□ -1.83
CHD3-212ENST00000570758 IGLC6P0CF74 106 aa3.59□□□□□ -1.83
CHD3-212ENST00000570758 GNG4P50150 75 aa3.59□□□□□ -1.83
CHD3-212ENST00000570758 NKX2-5P52952 324 aaPredicted RBP3.59□□□□□ -1.83
CHD3-212ENST00000570758 HAMPP81172 84 aa3.59□□□□□ -1.83
CHD3-212ENST00000570758 RPL36AP83881 106 aaKnown RBP3.59□□□□□ -1.83
CHD3-212ENST00000570758 LAGE3Q14657 143 aa3.59□□□□□ -1.83
CHD3-212ENST00000570758 NIT1Q86X76 327 aa3.59□□□□□ -1.83
CHD3-212ENST00000570758 Q8N814 137 aa3.59□□□□□ -1.83
CHD3-212ENST00000570758 OR2D3Q8NGH3 330 aa3.59□□□□□ -1.83
CHD3-212ENST00000570758 RPL36ALQ969Q0 106 aaKnown RBP3.59□□□□□ -1.83
CHD3-212ENST00000570758 DAZAP1Q96EP5 407 aaKnown RBP3.59□□□□□ -1.83
CHD3-212ENST00000570758 TPPP3Q9BW30 176 aa3.59□□□□□ -1.83
CHD3-212ENST00000570758 MED9Q9NWA0 146 aa3.59□□□□□ -1.83
CHD3-212ENST00000570758 BOLA1Q9Y3E2 137 aa3.59□□□□□ -1.83
CHD3-212ENST00000570758 IGLV5-52A0A0A0MRZ9 124 aa3.58□□□□□ -1.84
CHD3-212ENST00000570758 TRBV6-8A0A0A6YYG3 113 aa3.58□□□□□ -1.84
CHD3-212ENST00000570758 TRAV8-3A0A0A6YYJ7 113 aa3.58□□□□□ -1.84
CHD3-212ENST00000570758 A0A1B0GVG6 124 aa3.58□□□□□ -1.84
CHD3-212ENST00000570758 F5H697 171 aa3.58□□□□□ -1.84
CHD3-212ENST00000570758 K7EN84 100 aa3.58□□□□□ -1.84
CHD3-212ENST00000570758 LECT2O14960 151 aa3.58□□□□□ -1.84
CHD3-212ENST00000570758 P01737 135 aa3.58□□□□□ -1.84
CHD3-212ENST00000570758 GCSHP23434 173 aa3.58□□□□□ -1.84
CHD3-212ENST00000570758 RPS20P60866 119 aaKnown RBP3.58□□□□□ -1.84
CHD3-212ENST00000570758 ALKAL2Q6UX46 152 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms