RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 OVOL1O14753 267 aa11.65□□□□□ -0.54
SMG6-207ENST00000570756 ATP6V0E1O15342 81 aa11.65□□□□□ -0.54
SMG6-207ENST00000570756 NDUFV3P56181 108 aaKnown RBP11.65□□□□□ -0.54
SMG6-207ENST00000570756 ANXA2RQ3ZCQ2 193 aa11.65□□□□□ -0.54
SMG6-207ENST00000570756 C1orf122Q6ZSJ8 110 aa11.65□□□□□ -0.54
SMG6-207ENST00000570756 IGHV4OR15-8A0A075B7B6 117 aa11.65□□□□□ -0.55
SMG6-207ENST00000570756 A0A087WW49 117 aa11.65□□□□□ -0.55
SMG6-207ENST00000570756 SPRY2O43597 315 aa11.65□□□□□ -0.55
SMG6-207ENST00000570756 IGF1P05019 195 aa11.65□□□□□ -0.55
SMG6-207ENST00000570756 RAX2Q96IS3 184 aa11.65□□□□□ -0.55
SMG6-207ENST00000570756 A0A0B4J2C4 111 aa11.64□□□□□ -0.55
SMG6-207ENST00000570756 IGHV3-33P01772 117 aa11.64□□□□□ -0.55
SMG6-207ENST00000570756 NHLRC4P0CG21 123 aaPredicted RBP11.64□□□□□ -0.55
SMG6-207ENST00000570756 UCNP55089 124 aa11.64□□□□□ -0.55
SMG6-207ENST00000570756 LY6DQ14210 128 aa11.64□□□□□ -0.55
SMG6-207ENST00000570756 TTC32Q5I0X7 151 aa11.64□□□□□ -0.55
SMG6-207ENST00000570756 Q6Q795 121 aa11.64□□□□□ -0.55
SMG6-207ENST00000570756 A4D1N5 150 aa11.64□□□□□ -0.55
SMG6-207ENST00000570756 VCYO14598 125 aa11.64□□□□□ -0.55
SMG6-207ENST00000570756 ATXN8Q156A1 80 aa11.64□□□□□ -0.55
SMG6-207ENST00000570756 ZNF876PQ49A33 203 aa11.64□□□□□ -0.55
SMG6-207ENST00000570756 AMELXQ99217 191 aa11.64□□□□□ -0.55
SMG6-207ENST00000570756 GAGE12JA6NER3 117 aa11.63□□□□□ -0.55
SMG6-207ENST00000570756 GAGE7O76087 117 aa11.63□□□□□ -0.55
SMG6-207ENST00000570756 GAGE12FP0CL80 117 aa11.63□□□□□ -0.55
SMG6-207ENST00000570756 GAGE12GP0CL81 117 aa11.63□□□□□ -0.55
SMG6-207ENST00000570756 GAGE12IP0CL82 117 aa11.63□□□□□ -0.55
SMG6-207ENST00000570756 GAGE4Q13068 117 aa11.63□□□□□ -0.55
SMG6-207ENST00000570756 TRPT1Q86TN4 253 aaKnown RBP11.63□□□□□ -0.55
SMG6-207ENST00000570756 C20orf173Q96LM9 149 aa11.63□□□□□ -0.55
SMG6-207ENST00000570756 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.62□□□□□ -0.55
SMG6-207ENST00000570756 IFITM1P13164 125 aa11.62□□□□□ -0.55
SMG6-207ENST00000570756 TMEM263Q8WUH6 116 aaKnown RBP11.62□□□□□ -0.55
SMG6-207ENST00000570756 NXPH4O95158 308 aa11.62□□□□□ -0.55
SMG6-207ENST00000570756 POLR2KP53803 58 aaKnown RBP11.62□□□□□ -0.55
SMG6-207ENST00000570756 PRR30Q53SZ7 412 aaPredicted RBP11.62□□□□□ -0.55
SMG6-207ENST00000570756 ZNRF2Q8NHG8 242 aa11.62□□□□□ -0.55
SMG6-207ENST00000570756 SPANXA1Q9NS26 97 aa11.62□□□□□ -0.55
SMG6-207ENST00000570756 RNASE4P34096 147 aaKnown RBP11.61□□□□□ -0.55
SMG6-207ENST00000570756 CRIP2P52943 208 aaPredicted RBP11.61□□□□□ -0.55
SMG6-207ENST00000570756 Q8N1Y9 231 aa11.61□□□□□ -0.55
SMG6-207ENST00000570756 NTN5Q8WTR8 489 aaPredicted RBP11.61□□□□□ -0.55
SMG6-207ENST00000570756 PRORYQ9H606 182 aa11.61□□□□□ -0.55
SMG6-207ENST00000570756 RNASE3P12724 160 aaKnown RBP11.61□□□□□ -0.55
SMG6-207ENST00000570756 RPL39P62891 51 aaKnown RBP11.61□□□□□ -0.55
SMG6-207ENST00000570756 Q1RN00 199 aa11.61□□□□□ -0.55
SMG6-207ENST00000570756 LINC01600Q96MT4 127 aa11.61□□□□□ -0.55
SMG6-207ENST00000570756 TRAV4A0A0B4J268 109 aa11.6□□□□□ -0.55
SMG6-207ENST00000570756 LEPROTO15243 131 aa11.6□□□□□ -0.55
SMG6-207ENST00000570756 RPL13AP40429 203 aaKnown RBP11.6□□□□□ -0.55
SMG6-207ENST00000570756 FLNCQ14315 2725 aa11.6□□□□□ -0.55
SMG6-207ENST00000570756 TRAV8-4A0A0B4J246 113 aa11.6□□□□□ -0.55
SMG6-207ENST00000570756 H7C2G1 150 aa11.6□□□□□ -0.55
SMG6-207ENST00000570756 GNRH2O43555 120 aa11.6□□□□□ -0.55
SMG6-207ENST00000570756 LY6HO94772 140 aa11.6□□□□□ -0.55
SMG6-207ENST00000570756 LINC01620Q4KN68 170 aa11.6□□□□□ -0.55
SMG6-207ENST00000570756 Q8NA96 180 aa11.6□□□□□ -0.55
SMG6-207ENST00000570756 KIF25-AS1Q9Y6Z4 181 aa11.6□□□□□ -0.55
SMG6-207ENST00000570756 TRAV2A0A0B4J234 112 aa11.59□□□□□ -0.55
SMG6-207ENST00000570756 TRBV7-9A0A0J9YWB2 115 aa11.59□□□□□ -0.55
SMG6-207ENST00000570756 G3V318 75 aa11.59□□□□□ -0.55
SMG6-207ENST00000570756 LINC00315P59091 139 aa11.59□□□□□ -0.55
SMG6-207ENST00000570756 SUMO4Q6EEV6 95 aa11.59□□□□□ -0.55
SMG6-207ENST00000570756 APRG1Q8IVJ8 170 aa11.59□□□□□ -0.55
SMG6-207ENST00000570756 LINC01560Q8TB33 94 aa11.58□□□□□ -0.56
SMG6-207ENST00000570756 FAM19A4Q96LR4 140 aa11.58□□□□□ -0.56
SMG6-207ENST00000570756 TRBV27A0A0K0K1C4 114 aa11.58□□□□□ -0.56
SMG6-207ENST00000570756 SDHAF1A6NFY7 115 aa11.58□□□□□ -0.56
SMG6-207ENST00000570756 IGHV1-69P01742 117 aa11.58□□□□□ -0.56
SMG6-207ENST00000570756 ABCA4P78363 2273 aa11.57□□□□□ -0.56
SMG6-207ENST00000570756 TRBV10-2A0A0K0K1G8 114 aa11.57□□□□□ -0.56
SMG6-207ENST00000570756 TMEM223A0PJW6 202 aa11.57□□□□□ -0.56
SMG6-207ENST00000570756 CRLF1O75462 422 aa11.57□□□□□ -0.56
SMG6-207ENST00000570756 MUSTN1Q8IVN3 82 aa11.57□□□□□ -0.56
SMG6-207ENST00000570756 F5H697 171 aa11.57□□□□□ -0.56
SMG6-207ENST00000570756 EIF4EBP3O60516 100 aaPredicted RBP11.57□□□□□ -0.56
SMG6-207ENST00000570756 A0A0J9YX75 114 aa11.56□□□□□ -0.56
SMG6-207ENST00000570756 TRBV30A0A0K0K1B3 111 aa11.56□□□□□ -0.56
SMG6-207ENST00000570756 H3BMM0 161 aa11.56□□□□□ -0.56
SMG6-207ENST00000570756 SOCS3O14543 225 aa11.56□□□□□ -0.56
SMG6-207ENST00000570756 UBE2WQ96B02 151 aa11.56□□□□□ -0.56
SMG6-207ENST00000570756 MYO18BQ8IUG5 2567 aa11.56□□□□□ -0.56
SMG6-207ENST00000570756 KMT2BQ9UMN6 2715 aaPredicted RBP11.56□□□□□ -0.56
SMG6-207ENST00000570756 ZNF462Q96JM2 2506 aa11.56□□□□□ -0.56
SMG6-207ENST00000570756 FAM223BA6NKX1 122 aa11.56□□□□□ -0.56
SMG6-207ENST00000570756 M0R2P5 195 aa11.56□□□□□ -0.56
SMG6-207ENST00000570756 IGHV4-39P01824 125 aa11.56□□□□□ -0.56
SMG6-207ENST00000570756 FAM223AQ8IWN6 122 aa11.56□□□□□ -0.56
SMG6-207ENST00000570756 TRBV6-5A0A0K0K1A5 114 aa11.55□□□□□ -0.56
SMG6-207ENST00000570756 CCDC179H3BU77 68 aa11.55□□□□□ -0.56
SMG6-207ENST00000570756 C15orf53Q8NAA6 179 aa11.55□□□□□ -0.56
SMG6-207ENST00000570756 TEX49A0A1B0GTD5 131 aa11.55□□□□□ -0.56
SMG6-207ENST00000570756 RHOHQ15669 191 aa11.55□□□□□ -0.56
SMG6-207ENST00000570756 MRPL23Q16540 153 aaKnown RBP11.55□□□□□ -0.56
SMG6-207ENST00000570756 FAM159AQ6UWV7 190 aa11.55□□□□□ -0.56
SMG6-207ENST00000570756 ODF3Q96PU9 254 aa11.55□□□□□ -0.56
SMG6-207ENST00000570756 MUC4Q99102 2169 aa11.54□□□□□ -0.56
SMG6-207ENST00000570756 NSUN5P1Q3KNT7 163 aa11.54□□□□□ -0.56
SMG6-207ENST00000570756 DEFB104AQ8WTQ1 72 aa11.54□□□□□ -0.56
SMG6-207ENST00000570756 SIRPDQ9H106 197 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms