RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 C14orf178Q8N769 122 aaPredicted RBP8.84□□□□□ -0.99
CNOT1-220ENST00000569916 Q9UF83 564 aa8.84□□□□□ -0.99
CNOT1-220ENST00000569916 TNFRSF18Q9Y5U5 241 aa8.84□□□□□ -0.99
CNOT1-220ENST00000569916 TRBV20OR9-2A0A075B6H5 130 aa8.83□□□□□ -1
CNOT1-220ENST00000569916 RAB19A4D1S5 217 aa8.83□□□□□ -1
CNOT1-220ENST00000569916 GAGE12JA6NER3 117 aa8.83□□□□□ -1
CNOT1-220ENST00000569916 K7EP13 123 aa8.83□□□□□ -1
CNOT1-220ENST00000569916 SNAI2O43623 268 aa8.83□□□□□ -1
CNOT1-220ENST00000569916 CRYGDP07320 174 aa8.83□□□□□ -1
CNOT1-220ENST00000569916 GAGE1Q13065 139 aa8.83□□□□□ -1
CNOT1-220ENST00000569916 GAGE4Q13068 117 aa8.83□□□□□ -1
CNOT1-220ENST00000569916 GAGE5Q13069 117 aa8.83□□□□□ -1
CNOT1-220ENST00000569916 GAGE13Q4V321 117 aa8.83□□□□□ -1
CNOT1-220ENST00000569916 OR10AG1Q8NH19 301 aa8.83□□□□□ -1
CNOT1-220ENST00000569916 ATP6V0E2Q8NHE4 81 aa8.83□□□□□ -1
CNOT1-220ENST00000569916 SSBP4Q9BWG4 385 aaPredicted RBP8.83□□□□□ -1
CNOT1-220ENST00000569916 GTSF1LQ9H1H1 148 aa8.83□□□□□ -1
CNOT1-220ENST00000569916 VAX2Q9UIW0 290 aa8.83□□□□□ -1
CNOT1-220ENST00000569916 TRAV9-2A0A087WT02 112 aa8.82□□□□□ -1
CNOT1-220ENST00000569916 IGHV3-38A0A0C4DH36 116 aa8.82□□□□□ -1
CNOT1-220ENST00000569916 A6NJY4 79 aa8.82□□□□□ -1
CNOT1-220ENST00000569916 OR5AL1P0C617 328 aa8.82□□□□□ -1
CNOT1-220ENST00000569916 EVI2AP22794 236 aa8.82□□□□□ -1
CNOT1-220ENST00000569916 TAGLN2P37802 199 aaKnown RBP8.82□□□□□ -1
CNOT1-220ENST00000569916 GNG4P50150 75 aa8.82□□□□□ -1
CNOT1-220ENST00000569916 NKX2-5P52952 324 aaPredicted RBP8.82□□□□□ -1
CNOT1-220ENST00000569916 LELP1Q5T871 98 aa8.82□□□□□ -1
CNOT1-220ENST00000569916 SMIM12Q96EX1 92 aa8.82□□□□□ -1
CNOT1-220ENST00000569916 TRAV8-6A0A0B4J262 113 aa8.81□□□□□ -1
CNOT1-220ENST00000569916 C19orf71A6NCJ1 209 aa8.81□□□□□ -1
CNOT1-220ENST00000569916 LINC01556Q5JQF7 62 aa8.81□□□□□ -1
CNOT1-220ENST00000569916 OR10J3Q5JRS4 329 aa8.81□□□□□ -1
CNOT1-220ENST00000569916 MED9Q9NWA0 146 aa8.81□□□□□ -1
CNOT1-220ENST00000569916 MSRB1Q9NZV6 116 aa8.81□□□□□ -1
CNOT1-220ENST00000569916 BLOC1S1P78537 153 aa8.8□□□□□ -1
CNOT1-220ENST00000569916 SPATA12Q7Z6I5 190 aa8.8□□□□□ -1
CNOT1-220ENST00000569916 NFE4Q86UQ8 179 aa8.8□□□□□ -1
CNOT1-220ENST00000569916 C10orf126Q8N4M7 172 aa8.8□□□□□ -1
CNOT1-220ENST00000569916 DNAH5Q8TE73 4624 aa8.8□□□□□ -1
CNOT1-220ENST00000569916 RYR1P21817 5038 aa8.79□□□□□ -1
CNOT1-220ENST00000569916 LRP1BQ9NZR2 4599 aa8.79□□□□□ -1
CNOT1-220ENST00000569916 MUC21A0A0G2JKD1 596 aa8.79□□□□□ -1
CNOT1-220ENST00000569916 MUC21A0A140T8X8 626 aa8.79□□□□□ -1
CNOT1-220ENST00000569916 C16orf90A8MZG2 172 aa8.79□□□□□ -1
CNOT1-220ENST00000569916 GZMBP10144 247 aa8.79□□□□□ -1
CNOT1-220ENST00000569916 SPANXN1Q5VSR9 72 aa8.79□□□□□ -1
CNOT1-220ENST00000569916 LYPD6BQ8NI32 183 aa8.79□□□□□ -1
CNOT1-220ENST00000569916 TRBV10-1A0A0K0K1A3 114 aa8.78□□□□□ -1
CNOT1-220ENST00000569916 IGLC6P0CF74 106 aa8.78□□□□□ -1
CNOT1-220ENST00000569916 KRTAP10-2P60368 255 aa8.78□□□□□ -1
CNOT1-220ENST00000569916 RPS20P60866 119 aaKnown RBP8.78□□□□□ -1
CNOT1-220ENST00000569916 ZNF56Q15929 161 aa8.78□□□□□ -1
CNOT1-220ENST00000569916 OR2D3Q8NGH3 330 aa8.78□□□□□ -1
CNOT1-220ENST00000569916 DAZAP1Q96EP5 407 aaKnown RBP8.78□□□□□ -1
CNOT1-220ENST00000569916 IBA57-AS1B1ANH7 110 aa8.77□□□□□ -1.01
CNOT1-220ENST00000569916 P01737 135 aa8.77□□□□□ -1.01
CNOT1-220ENST00000569916 IGHV3-30P01768 117 aa8.77□□□□□ -1.01
CNOT1-220ENST00000569916 IGHV3-33P01772 117 aa8.77□□□□□ -1.01
CNOT1-220ENST00000569916 IGHV3-30-3P0DP02 117 aa8.77□□□□□ -1.01
CNOT1-220ENST00000569916 IGHV3-30-5P0DP03 117 aa8.77□□□□□ -1.01
CNOT1-220ENST00000569916 ERVFC1-1P60608 527 aa8.77□□□□□ -1.01
CNOT1-220ENST00000569916 RAB4BP61018 213 aa8.77□□□□□ -1.01
CNOT1-220ENST00000569916 Q8N3U1 123 aa8.77□□□□□ -1.01
CNOT1-220ENST00000569916 FER1L6-AS1Q8NA97 138 aa8.77□□□□□ -1.01
CNOT1-220ENST00000569916 BIN3Q9NQY0 253 aa8.77□□□□□ -1.01
CNOT1-220ENST00000569916 RBFOX3A6NFN3 312 aa8.76□□□□□ -1.01
CNOT1-220ENST00000569916 K7EN84 100 aa8.76□□□□□ -1.01
CNOT1-220ENST00000569916 UBE2D3P61077 147 aa8.76□□□□□ -1.01
CNOT1-220ENST00000569916 SSTP61278 116 aa8.76□□□□□ -1.01
CNOT1-220ENST00000569916 UBE2D2P62837 147 aa8.76□□□□□ -1.01
CNOT1-220ENST00000569916 RPL36AP83881 106 aaKnown RBP8.76□□□□□ -1.01
CNOT1-220ENST00000569916 OR10G8Q8NGN5 311 aa8.76□□□□□ -1.01
CNOT1-220ENST00000569916 RPL36ALQ969Q0 106 aaKnown RBP8.76□□□□□ -1.01
CNOT1-220ENST00000569916 AP1S3Q96PC3 154 aa8.76□□□□□ -1.01
CNOT1-220ENST00000569916 TPPP3Q9BW30 176 aa8.76□□□□□ -1.01
CNOT1-220ENST00000569916 KIF25-AS1Q9Y6Z4 181 aa8.76□□□□□ -1.01
CNOT1-220ENST00000569916 TRBV7-3A0A075B6L6 115 aa8.75□□□□□ -1.01
CNOT1-220ENST00000569916 A0A087WWC5 75 aa8.75□□□□□ -1.01
CNOT1-220ENST00000569916 TMEM250H0YL14 139 aa8.75□□□□□ -1.01
CNOT1-220ENST00000569916 NEXN-AS1Q8NBZ9 246 aa8.75□□□□□ -1.01
CNOT1-220ENST00000569916 A0A087WTM6 91 aa8.74□□□□□ -1.01
CNOT1-220ENST00000569916 XKRY2A2RUG3 117 aa8.74□□□□□ -1.01
CNOT1-220ENST00000569916 CACNG7P62955 275 aa8.74□□□□□ -1.01
CNOT1-220ENST00000569916 LAGE3Q14657 143 aa8.74□□□□□ -1.01
CNOT1-220ENST00000569916 TOR2AQ5JU69 321 aa8.74□□□□□ -1.01
CNOT1-220ENST00000569916 NUDT10Q8NFP7 164 aa8.74□□□□□ -1.01
CNOT1-220ENST00000569916 OCC1Q8TAD7 63 aa8.74□□□□□ -1.01
CNOT1-220ENST00000569916 NUDT11Q96G61 164 aa8.74□□□□□ -1.01
CNOT1-220ENST00000569916 RNASE7Q9H1E1 156 aaKnown RBP8.74□□□□□ -1.01
CNOT1-220ENST00000569916 APOBP04114 4563 aaKnown RBP8.74□□□□□ -1.01
CNOT1-220ENST00000569916 EREGO14944 169 aa8.73□□□□□ -1.01
CNOT1-220ENST00000569916 SMIM17P0DL12 118 aa8.73□□□□□ -1.01
CNOT1-220ENST00000569916 Q9HAA7 133 aa8.73□□□□□ -1.01
CNOT1-220ENST00000569916 HSPG2P98160 4391 aa8.73□□□□□ -1.01
CNOT1-220ENST00000569916 F2Z2F3 143 aa8.72□□□□□ -1.01
CNOT1-220ENST00000569916 F5H697 171 aa8.72□□□□□ -1.01
CNOT1-220ENST00000569916 CDK2AP2O75956 126 aa8.72□□□□□ -1.01
CNOT1-220ENST00000569916 FUSP35637 526 aaKnown RBP eCLIP8.72□□□□□ -1.01
CNOT1-220ENST00000569916 CTRLP40313 264 aa8.72□□□□□ -1.01
CNOT1-220ENST00000569916 LYZL1Q6UWQ5 148 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms