RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 RRN3P1Q2M238 152 aa4.49□□□□□ -1.69
CYLD-216ENST00000569891 DNAJC30Q96LL9 226 aa4.49□□□□□ -1.69
CYLD-216ENST00000569891 ABCA13Q86UQ4 5058 aa4.49□□□□□ -1.69
CYLD-216ENST00000569891 APOC4P55056 127 aa4.49□□□□□ -1.69
CYLD-216ENST00000569891 SMIM2Q9BVW6 85 aa4.49□□□□□ -1.69
CYLD-216ENST00000569891 TP53TG3Q9ULZ0 132 aa4.49□□□□□ -1.69
CYLD-216ENST00000569891 IGHV3-16A0A0C4DH30 117 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 PRSS1P07477 247 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 EVI2AP22794 236 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 ZNF876PQ49A33 203 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 TMEM158Q8WZ71 300 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 C9orf85Q96MD7 179 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 C3orf79P0CE67 100 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 FAM19A2Q8N3H0 131 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 C14orf178Q8N769 122 aaPredicted RBP4.48□□□□□ -1.69
CYLD-216ENST00000569891 IFI27L1Q96BM0 104 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 C16orf74Q96GX8 76 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 UQCR10Q9UDW1 63 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 CYSLTR1Q9Y271 337 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 TNFRSF18Q9Y5U5 241 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 TRAV9-2A0A087WT02 112 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 IGHV1-24A0A0C4DH33 117 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.48□□□□□ -1.69
CYLD-216ENST00000569891 SYS1-DBNDD2H3BUS1 97 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 RHOHQ15669 191 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 SPATA12Q7Z6I5 190 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 MUC21A0A0G2JKD1 596 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 MUC21A0A140T8X8 626 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 NPYP01303 97 aa4.48□□□□□ -1.69
CYLD-216ENST00000569891 IFI27P40305 119 aaPredicted RBP4.48□□□□□ -1.69
CYLD-216ENST00000569891 PCLOQ9Y6V0 5065 aa4.47□□□□□ -1.69
CYLD-216ENST00000569891 IFITM10A6NMD0 228 aa4.47□□□□□ -1.69
CYLD-216ENST00000569891 GNRH2O43555 120 aa4.47□□□□□ -1.69
CYLD-216ENST00000569891 LGALS9BQ3B8N2 356 aa4.47□□□□□ -1.69
CYLD-216ENST00000569891 LGALS9CQ6DKI2 356 aa4.47□□□□□ -1.69
CYLD-216ENST00000569891 TEX43Q6ZNM6 134 aa4.47□□□□□ -1.69
CYLD-216ENST00000569891 Q6ZWC4 215 aa4.47□□□□□ -1.69
CYLD-216ENST00000569891 Q8N1Y9 231 aa4.47□□□□□ -1.69
CYLD-216ENST00000569891 SMIM9A6NGZ8 99 aa4.47□□□□□ -1.69
CYLD-216ENST00000569891 HERVK_113P61574 105 aa4.47□□□□□ -1.69
CYLD-216ENST00000569891 TMEM97Q5BJF2 176 aa4.47□□□□□ -1.69
CYLD-216ENST00000569891 C18orf65Q6ZTR6 163 aa4.47□□□□□ -1.69
CYLD-216ENST00000569891 C11orf21Q9P2W6 132 aa4.47□□□□□ -1.69
CYLD-216ENST00000569891 FRMD6-AS1P0C7T7 363 aa4.47□□□□□ -1.69
CYLD-216ENST00000569891 HTN1P15515 57 aa4.47□□□□□ -1.69
CYLD-216ENST00000569891 PRR9Q5T870 116 aa4.47□□□□□ -1.69
CYLD-216ENST00000569891 FAM74A4Q5TZK3 123 aa4.47□□□□□ -1.69
CYLD-216ENST00000569891 AMTNQ6UX39 209 aa4.47□□□□□ -1.69
CYLD-216ENST00000569891 ZFP2Q6ZN57 461 aa4.47□□□□□ -1.69
CYLD-216ENST00000569891 TMEM263Q8WUH6 116 aaKnown RBP4.47□□□□□ -1.69
CYLD-216ENST00000569891 TMEM141Q96I45 108 aa4.47□□□□□ -1.69
CYLD-216ENST00000569891 TRAV12-2A0A075B6T6 113 aa4.46□□□□□ -1.69
CYLD-216ENST00000569891 TRBV6-5A0A0K0K1A5 114 aa4.46□□□□□ -1.69
CYLD-216ENST00000569891 RNASE3P12724 160 aaKnown RBP4.46□□□□□ -1.69
CYLD-216ENST00000569891 DDTP30046 118 aa4.46□□□□□ -1.69
CYLD-216ENST00000569891 SPATA45Q537H7 98 aa4.46□□□□□ -1.69
CYLD-216ENST00000569891 RNF185Q96GF1 192 aa4.46□□□□□ -1.69
CYLD-216ENST00000569891 TEX48A0A1B0GUV7 120 aa4.46□□□□□ -1.7
CYLD-216ENST00000569891 NCR2O95944 276 aa4.46□□□□□ -1.7
CYLD-216ENST00000569891 C12orf54Q6X4T0 127 aa4.46□□□□□ -1.7
CYLD-216ENST00000569891 ZNF256Q9Y2P7 627 aaPredicted RBP4.46□□□□□ -1.7
CYLD-216ENST00000569891 CRXO43186 299 aaPredicted RBP4.46□□□□□ -1.7
CYLD-216ENST00000569891 HNRNPA3P51991 378 aaKnown RBP4.46□□□□□ -1.7
CYLD-216ENST00000569891 SHISA2Q6UWI4 295 aa4.46□□□□□ -1.7
CYLD-216ENST00000569891 C3orf56Q8N813 242 aa4.46□□□□□ -1.7
CYLD-216ENST00000569891 LINC00482Q8N8I6 264 aa4.46□□□□□ -1.7
CYLD-216ENST00000569891 SCGB3A1Q96QR1 104 aa4.46□□□□□ -1.7
CYLD-216ENST00000569891 LINC01546A6NGU7 62 aa4.46□□□□□ -1.7
CYLD-216ENST00000569891 PLNP26678 52 aa4.46□□□□□ -1.7
CYLD-216ENST00000569891 BEAN1Q3B7T3 259 aa4.46□□□□□ -1.7
CYLD-216ENST00000569891 OR4C5Q8NGB2 326 aa4.46□□□□□ -1.7
CYLD-216ENST00000569891 ZNF747Q9BV97 191 aa4.46□□□□□ -1.7
CYLD-216ENST00000569891 EDA2RQ9HAV5 297 aa4.46□□□□□ -1.7
CYLD-216ENST00000569891 KIR2DL5BA0A0G2JN68 375 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 KIR2DL5BA0A0G2JPC4 375 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 I3L3M4 83 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 M0R143 59 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 ADAMTSL5Q6ZMM2 481 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 KIR2DL5AQ8N109 375 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 POM121L12Q8N7R1 296 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 KIR2DL5BQ8NHK3 375 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 MIEN1Q9BRT3 115 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 CSTL1Q9H114 145 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 MSRB1Q9NZV6 116 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 XCL2Q9UBD3 114 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 NPSP0C0P6 89 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 RPL36AP83881 106 aaKnown RBP4.45□□□□□ -1.7
CYLD-216ENST00000569891 ODF3L2Q3SX64 289 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 RPL36ALQ969Q0 106 aaKnown RBP4.45□□□□□ -1.7
CYLD-216ENST00000569891 PAM16Q9Y3D7 125 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 TRBV10-1A0A0K0K1A3 114 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 H0Y8G0 127 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 DPM2O94777 84 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 Q71RC1 249 aaPredicted RBP4.45□□□□□ -1.7
CYLD-216ENST00000569891 SMR3AQ99954 134 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 IGHV3OR16-12A0A075B7B8 117 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 SMKR1H3BMG3 65 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 NUPR1O60356 82 aa4.45□□□□□ -1.7
CYLD-216ENST00000569891 PRB4P10163 310 aaPredicted RBP4.44□□□□□ -1.7
CYLD-216ENST00000569891 FXYD7P58549 80 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms