RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 PHLDA1Q8WV24 401 aaPredicted RBP16.57■□□□□ 0.24
RAB40C-212ENST00000569575 FRZBQ92765 325 aa16.57■□□□□ 0.24
RAB40C-212ENST00000569575 CRYGDP07320 174 aa16.56■□□□□ 0.24
RAB40C-212ENST00000569575 TCTAP57738 103 aa16.56■□□□□ 0.24
RAB40C-212ENST00000569575 RASL11AQ6T310 242 aa16.56■□□□□ 0.24
RAB40C-212ENST00000569575 MUC7Q8TAX7 377 aa16.56■□□□□ 0.24
RAB40C-212ENST00000569575 TRGV4A0A0C4DH28 118 aa16.55■□□□□ 0.24
RAB40C-212ENST00000569575 UFSP1Q6NVU6 142 aa16.55■□□□□ 0.24
RAB40C-212ENST00000569575 ZNF479Q96JC4 524 aa16.55■□□□□ 0.24
RAB40C-212ENST00000569575 DPH3P1Q9H4G8 78 aa16.55■□□□□ 0.24
RAB40C-212ENST00000569575 PRO0255Q9UI72 69 aa16.55■□□□□ 0.24
RAB40C-212ENST00000569575 KLK5Q9Y337 293 aaPredicted RBP16.55■□□□□ 0.24
RAB40C-212ENST00000569575 TRBV6-4A0A1B0GX49 114 aa16.54■□□□□ 0.24
RAB40C-212ENST00000569575 F5H768 121 aa16.54■□□□□ 0.24
RAB40C-212ENST00000569575 S100A1P23297 94 aa16.54■□□□□ 0.24
RAB40C-212ENST00000569575 FHL2Q14192 279 aa16.54■□□□□ 0.24
RAB40C-212ENST00000569575 CEMP1Q6PRD7 247 aaPredicted RBP16.54■□□□□ 0.24
RAB40C-212ENST00000569575 TMEM191AQ9H0A3 160 aa16.54■□□□□ 0.24
RAB40C-212ENST00000569575 TGP01266 2768 aa16.54■□□□□ 0.24
RAB40C-212ENST00000569575 MUC21A0A0G2JKD1 596 aa16.53■□□□□ 0.24
RAB40C-212ENST00000569575 MUC21A0A140T8X8 626 aa16.53■□□□□ 0.24
RAB40C-212ENST00000569575 C3orf84H3BNL1 204 aa16.53■□□□□ 0.24
RAB40C-212ENST00000569575 RAB4BP61018 213 aa16.53■□□□□ 0.24
RAB40C-212ENST00000569575 HHLA3Q9XRX5 114 aa16.53■□□□□ 0.24
RAB40C-212ENST00000569575 FAM3BP58499 235 aaPredicted RBP16.52■□□□□ 0.24
RAB40C-212ENST00000569575 HBBP68871 147 aa16.52■□□□□ 0.24
RAB40C-212ENST00000569575 C14orf178Q8N769 122 aaPredicted RBP16.52■□□□□ 0.24
RAB40C-212ENST00000569575 MSRB1Q9NZV6 116 aa16.52■□□□□ 0.24
RAB40C-212ENST00000569575 KIF25-AS1Q9Y6Z4 181 aa16.52■□□□□ 0.24
RAB40C-212ENST00000569575 NACAE9PAV3 2078 aa16.52■□□□□ 0.23
RAB40C-212ENST00000569575 GATA1P15976 413 aaPredicted RBP16.51■□□□□ 0.23
RAB40C-212ENST00000569575 COX19Q49B96 90 aa16.51■□□□□ 0.23
RAB40C-212ENST00000569575 JPT2Q9H910 190 aa16.51■□□□□ 0.23
RAB40C-212ENST00000569575 A0A1B0GXF2 115 aa16.5■□□□□ 0.23
RAB40C-212ENST00000569575 IGHV3-53P01767 116 aa16.5■□□□□ 0.23
RAB40C-212ENST00000569575 HTN3P15516 51 aa16.5■□□□□ 0.23
RAB40C-212ENST00000569575 HOXA5P20719 270 aa16.5■□□□□ 0.23
RAB40C-212ENST00000569575 EVI2AP22794 236 aa16.5■□□□□ 0.23
RAB40C-212ENST00000569575 SSTP61278 116 aa16.5■□□□□ 0.23
RAB40C-212ENST00000569575 FAM74A4Q5TZK3 123 aa16.5■□□□□ 0.23
RAB40C-212ENST00000569575 GATD1Q8NB37 220 aa16.5■□□□□ 0.23
RAB40C-212ENST00000569575 A0A087WWL8 130 aa16.49■□□□□ 0.23
RAB40C-212ENST00000569575 H7C1H1 209 aa16.49■□□□□ 0.23
RAB40C-212ENST00000569575 CRYBA4P53673 196 aa16.49■□□□□ 0.23
RAB40C-212ENST00000569575 C15orf53Q8NAA6 179 aa16.49■□□□□ 0.23
RAB40C-212ENST00000569575 PRADC1Q9BSG0 188 aa16.49■□□□□ 0.23
RAB40C-212ENST00000569575 SAMD10Q9BYL1 202 aa16.49■□□□□ 0.23
RAB40C-212ENST00000569575 TRBV10-1A0A0K0K1A3 114 aa16.48■□□□□ 0.23
RAB40C-212ENST00000569575 LINC00315P59091 139 aa16.48■□□□□ 0.23
RAB40C-212ENST00000569575 RHOHQ15669 191 aa16.48■□□□□ 0.23
RAB40C-212ENST00000569575 SMCO4Q9NRQ5 59 aa16.48■□□□□ 0.23
RAB40C-212ENST00000569575 PAX4O43316 350 aa16.47■□□□□ 0.23
RAB40C-212ENST00000569575 ZNF56Q15929 161 aa16.46■□□□□ 0.23
RAB40C-212ENST00000569575 MRPL54Q6P161 138 aaKnown RBP16.46■□□□□ 0.23
RAB40C-212ENST00000569575 SH2D6Q7Z4S9 175 aa16.46■□□□□ 0.23
RAB40C-212ENST00000569575 TRAV26-1A0A087WT03 109 aa16.45■□□□□ 0.22
RAB40C-212ENST00000569575 F5H697 171 aa16.45■□□□□ 0.22
RAB40C-212ENST00000569575 CAMPP49913 170 aa16.45■□□□□ 0.22
RAB40C-212ENST00000569575 SLC25A29Q8N8R3 303 aa16.45■□□□□ 0.22
RAB40C-212ENST00000569575 TRBV24-1A0A075B6N3 115 aa16.44■□□□□ 0.22
RAB40C-212ENST00000569575 K7EQD1 137 aa16.44■□□□□ 0.22
RAB40C-212ENST00000569575 URGCP-MRPS24S4R325 110 aa16.44■□□□□ 0.22
RAB40C-212ENST00000569575 IGHV3-73A0A0B4J1V6 119 aa16.43■□□□□ 0.22
RAB40C-212ENST00000569575 PPP1R17O96001 155 aa16.43■□□□□ 0.22
RAB40C-212ENST00000569575 MRPL23Q16540 153 aaKnown RBP16.43■□□□□ 0.22
RAB40C-212ENST00000569575 FAM104BQ5XKR9 115 aa16.43■□□□□ 0.22
RAB40C-212ENST00000569575 TMEM88Q6PEY1 159 aa16.43■□□□□ 0.22
RAB40C-212ENST00000569575 ATRAIDQ6UW56 229 aa16.43■□□□□ 0.22
RAB40C-212ENST00000569575 MRAP2Q96G30 205 aa16.43■□□□□ 0.22
RAB40C-212ENST00000569575 MGPP08493 103 aa16.42■□□□□ 0.22
RAB40C-212ENST00000569575 ELOBQ15370 118 aa16.42■□□□□ 0.22
RAB40C-212ENST00000569575 VSIG2Q96IQ7 327 aa16.42■□□□□ 0.22
RAB40C-212ENST00000569575 DNAJC30Q96LL9 226 aa16.42■□□□□ 0.22
RAB40C-212ENST00000569575 IGLL5B9A064 214 aa16.41■□□□□ 0.22
RAB40C-212ENST00000569575 ATP6V1G1O75348 118 aa16.41■□□□□ 0.22
RAB40C-212ENST00000569575 MT-ND6P03923 174 aa16.41■□□□□ 0.22
RAB40C-212ENST00000569575 GNB1LQ9BYB4 327 aa16.41■□□□□ 0.22
RAB40C-212ENST00000569575 ICOSQ9Y6W8 199 aa16.41■□□□□ 0.22
RAB40C-212ENST00000569575 PPBPP02775 128 aa16.4■□□□□ 0.22
RAB40C-212ENST00000569575 RAB4AP20338 218 aa16.4■□□□□ 0.22
RAB40C-212ENST00000569575 M0QY20 66 aa16.39■□□□□ 0.21
RAB40C-212ENST00000569575 HLA-DQA1P01909 254 aa16.39■□□□□ 0.21
RAB40C-212ENST00000569575 Q6ZSN1 163 aa16.39■□□□□ 0.21
RAB40C-212ENST00000569575 GYPEP15421 78 aa16.38■□□□□ 0.21
RAB40C-212ENST00000569575 RPL36AP83881 106 aaKnown RBP16.38■□□□□ 0.21
RAB40C-212ENST00000569575 CASC10Q5T4H9 136 aa16.38■□□□□ 0.21
RAB40C-212ENST00000569575 SUMO4Q6EEV6 95 aa16.38■□□□□ 0.21
RAB40C-212ENST00000569575 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.38■□□□□ 0.21
RAB40C-212ENST00000569575 RPL36ALQ969Q0 106 aaKnown RBP16.38■□□□□ 0.21
RAB40C-212ENST00000569575 NIT2Q9NQR4 276 aa16.38■□□□□ 0.21
RAB40C-212ENST00000569575 TRBV7-3A0A075B6L6 115 aa16.37■□□□□ 0.21
RAB40C-212ENST00000569575 A0A0J9YY99 117 aa16.37■□□□□ 0.21
RAB40C-212ENST00000569575 AMN1Q8IY45 258 aa16.37■□□□□ 0.21
RAB40C-212ENST00000569575 RNF185Q96GF1 192 aa16.37■□□□□ 0.21
RAB40C-212ENST00000569575 SRIP30626 198 aa16.36■□□□□ 0.21
RAB40C-212ENST00000569575 APLNQ9ULZ1 77 aa16.36■□□□□ 0.21
RAB40C-212ENST00000569575 ZFAND6Q6FIF0 208 aa16.35■□□□□ 0.21
RAB40C-212ENST00000569575 NEGR1Q7Z3B1 354 aa16.35■□□□□ 0.21
RAB40C-212ENST00000569575 YPEL4Q96NS1 127 aa16.35■□□□□ 0.21
RAB40C-212ENST00000569575 TMEM136Q6ZRR5 245 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms