RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 DAZAP1Q96EP5 407 aaKnown RBP6.2□□□□□ -1.42
GTF3C1-210ENST00000569394 PRADC1Q9BSG0 188 aa6.2□□□□□ -1.42
GTF3C1-210ENST00000569394 MLST8Q9BVC4 326 aa6.2□□□□□ -1.42
GTF3C1-210ENST00000569394 KRTAP1-5Q9BYS1 174 aa6.2□□□□□ -1.42
GTF3C1-210ENST00000569394 EIF5A2Q9GZV4 153 aaKnown RBP6.2□□□□□ -1.42
GTF3C1-210ENST00000569394 IL36BQ9NZH7 164 aa6.2□□□□□ -1.42
GTF3C1-210ENST00000569394 MRPS16Q9Y3D3 137 aaKnown RBP6.2□□□□□ -1.42
GTF3C1-210ENST00000569394 TNFRSF18Q9Y5U5 241 aa6.2□□□□□ -1.42
GTF3C1-210ENST00000569394 A8MWV9 139 aa6.19□□□□□ -1.42
GTF3C1-210ENST00000569394 PDE6DO43924 150 aa6.19□□□□□ -1.42
GTF3C1-210ENST00000569394 IGLV2-8P01709 118 aa6.19□□□□□ -1.42
GTF3C1-210ENST00000569394 FAM3BP58499 235 aaPredicted RBP6.19□□□□□ -1.42
GTF3C1-210ENST00000569394 SPANXN1Q5VSR9 72 aa6.19□□□□□ -1.42
GTF3C1-210ENST00000569394 OR2D3Q8NGH3 330 aa6.19□□□□□ -1.42
GTF3C1-210ENST00000569394 C11orf52Q96A22 123 aa6.19□□□□□ -1.42
GTF3C1-210ENST00000569394 TXNDC17Q9BRA2 123 aa6.19□□□□□ -1.42
GTF3C1-210ENST00000569394 TRBV20OR9-2A0A075B6H5 130 aa6.18□□□□□ -1.42
GTF3C1-210ENST00000569394 RHOHQ15669 191 aa6.18□□□□□ -1.42
GTF3C1-210ENST00000569394 OR10J3Q5JRS4 329 aa6.18□□□□□ -1.42
GTF3C1-210ENST00000569394 SOHLH1Q5JUK2 328 aa6.18□□□□□ -1.42
GTF3C1-210ENST00000569394 COX8CQ7Z4L0 72 aa6.18□□□□□ -1.42
GTF3C1-210ENST00000569394 ZFP82Q8N141 532 aa6.18□□□□□ -1.42
GTF3C1-210ENST00000569394 C6orf223Q8N319 242 aa6.18□□□□□ -1.42
GTF3C1-210ENST00000569394 OCC1Q8TAD7 63 aa6.18□□□□□ -1.42
GTF3C1-210ENST00000569394 F5H697 171 aa6.17□□□□□ -1.42
GTF3C1-210ENST00000569394 P01737 135 aa6.17□□□□□ -1.42
GTF3C1-210ENST00000569394 IGHV3-30P01768 117 aa6.17□□□□□ -1.42
GTF3C1-210ENST00000569394 IGHV3-33P01772 117 aa6.17□□□□□ -1.42
GTF3C1-210ENST00000569394 MGPP08493 103 aa6.17□□□□□ -1.42
GTF3C1-210ENST00000569394 IGHV3-30-3P0DP02 117 aa6.17□□□□□ -1.42
GTF3C1-210ENST00000569394 IGHV3-30-5P0DP03 117 aa6.17□□□□□ -1.42
GTF3C1-210ENST00000569394 ZNF56Q15929 161 aa6.17□□□□□ -1.42
GTF3C1-210ENST00000569394 SVIPQ8NHG7 77 aa6.17□□□□□ -1.42
GTF3C1-210ENST00000569394 SFRP2Q96HF1 295 aa6.17□□□□□ -1.42
GTF3C1-210ENST00000569394 UPK3BQ9BT76 320 aa6.17□□□□□ -1.42
GTF3C1-210ENST00000569394 RNASE7Q9H1E1 156 aaKnown RBP6.17□□□□□ -1.42
GTF3C1-210ENST00000569394 TRBV6-4A0A1B0GX49 114 aa6.16□□□□□ -1.42
GTF3C1-210ENST00000569394 K7EN84 100 aa6.16□□□□□ -1.42
GTF3C1-210ENST00000569394 CRYGDP07320 174 aa6.16□□□□□ -1.42
GTF3C1-210ENST00000569394 FUSP35637 526 aaKnown RBP eCLIP6.16□□□□□ -1.42
GTF3C1-210ENST00000569394 LINC00315P59091 139 aa6.16□□□□□ -1.42
GTF3C1-210ENST00000569394 DNLZQ5SXM8 178 aa6.16□□□□□ -1.42
GTF3C1-210ENST00000569394 Q8N3U1 123 aa6.16□□□□□ -1.42
GTF3C1-210ENST00000569394 NUDT10Q8NFP7 164 aa6.16□□□□□ -1.42
GTF3C1-210ENST00000569394 ATP6V0E2Q8NHE4 81 aa6.16□□□□□ -1.42
GTF3C1-210ENST00000569394 DEFB104AQ8WTQ1 72 aa6.16□□□□□ -1.42
GTF3C1-210ENST00000569394 NUDT11Q96G61 164 aa6.16□□□□□ -1.42
GTF3C1-210ENST00000569394 SCRT2Q9NQ03 307 aa6.16□□□□□ -1.42
GTF3C1-210ENST00000569394 MSRB1Q9NZV6 116 aa6.16□□□□□ -1.42
GTF3C1-210ENST00000569394 DNAH17Q9UFH2 4485 aa6.16□□□□□ -1.42
GTF3C1-210ENST00000569394 FAT2Q9NYQ8 4349 aa6.16□□□□□ -1.42
GTF3C1-210ENST00000569394 IGHV3-38A0A0C4DH36 116 aa6.15□□□□□ -1.42
GTF3C1-210ENST00000569394 TTC32Q5I0X7 151 aa6.15□□□□□ -1.42
GTF3C1-210ENST00000569394 LYZL1Q6UWQ5 148 aa6.15□□□□□ -1.42
GTF3C1-210ENST00000569394 ZFP2Q6ZN57 461 aa6.15□□□□□ -1.42
GTF3C1-210ENST00000569394 LINC00336Q6ZUF6 198 aa6.15□□□□□ -1.42
GTF3C1-210ENST00000569394 FER1L6-AS1Q8NA97 138 aa6.15□□□□□ -1.42
GTF3C1-210ENST00000569394 PTH2Q96A98 100 aa6.15□□□□□ -1.42
GTF3C1-210ENST00000569394 LY96Q9Y6Y9 160 aa6.15□□□□□ -1.42
GTF3C1-210ENST00000569394 TRAV8-6A0A0B4J262 113 aa6.14□□□□□ -1.43
GTF3C1-210ENST00000569394 C19orf71A6NCJ1 209 aa6.14□□□□□ -1.43
GTF3C1-210ENST00000569394 SMIM17P0DL12 118 aa6.14□□□□□ -1.43
GTF3C1-210ENST00000569394 EVI2AP22794 236 aa6.14□□□□□ -1.43
GTF3C1-210ENST00000569394 TAGLN2P37802 199 aaKnown RBP6.14□□□□□ -1.43
GTF3C1-210ENST00000569394 SRSF3P84103 164 aaKnown RBP6.14□□□□□ -1.43
GTF3C1-210ENST00000569394 UFSP1Q6NVU6 142 aa6.14□□□□□ -1.43
GTF3C1-210ENST00000569394 TEX261Q6UWH6 196 aa6.14□□□□□ -1.43
GTF3C1-210ENST00000569394 FAM210AQ96ND0 272 aa6.14□□□□□ -1.43
GTF3C1-210ENST00000569394 SMIM7Q9BQ49 75 aa6.14□□□□□ -1.43
GTF3C1-210ENST00000569394 Q9HAA7 133 aa6.14□□□□□ -1.43
GTF3C1-210ENST00000569394 A0A1B0GVY2 172 aa6.13□□□□□ -1.43
GTF3C1-210ENST00000569394 ZNF727A8MUV8 499 aa6.13□□□□□ -1.43
GTF3C1-210ENST00000569394 RHODO00212 210 aa6.13□□□□□ -1.43
GTF3C1-210ENST00000569394 SNAI2O43623 268 aa6.13□□□□□ -1.43
GTF3C1-210ENST00000569394 GATCO43716 136 aaKnown RBP6.13□□□□□ -1.43
GTF3C1-210ENST00000569394 CIDEAO60543 219 aa6.13□□□□□ -1.43
GTF3C1-210ENST00000569394 SRP19P09132 144 aaKnown RBP6.13□□□□□ -1.43
GTF3C1-210ENST00000569394 MED14OSP0DP75 135 aa6.13□□□□□ -1.43
GTF3C1-210ENST00000569394 ERVFC1-1P60608 527 aa6.13□□□□□ -1.43
GTF3C1-210ENST00000569394 RPS20P60866 119 aaKnown RBP6.13□□□□□ -1.43
GTF3C1-210ENST00000569394 TWIST1Q15672 202 aa6.13□□□□□ -1.43
GTF3C1-210ENST00000569394 LYPD6BQ8NI32 183 aa6.13□□□□□ -1.43
GTF3C1-210ENST00000569394 GTSF1LQ9H1H1 148 aa6.13□□□□□ -1.43
GTF3C1-210ENST00000569394 RPP21Q9H633 154 aaKnown RBP6.13□□□□□ -1.43
GTF3C1-210ENST00000569394 PLA2G2DQ9UNK4 145 aa6.13□□□□□ -1.43
GTF3C1-210ENST00000569394 TRAV9-2A0A087WT02 112 aa6.12□□□□□ -1.43
GTF3C1-210ENST00000569394 XKRY2A2RUG3 117 aa6.12□□□□□ -1.43
GTF3C1-210ENST00000569394 C9JQL5 133 aa6.12□□□□□ -1.43
GTF3C1-210ENST00000569394 OR5AL1P0C617 328 aa6.12□□□□□ -1.43
GTF3C1-210ENST00000569394 IGLC6P0CF74 106 aa6.12□□□□□ -1.43
GTF3C1-210ENST00000569394 NTF3P20783 257 aa6.12□□□□□ -1.43
GTF3C1-210ENST00000569394 SH2D6Q7Z4S9 175 aa6.12□□□□□ -1.43
GTF3C1-210ENST00000569394 PGLYRP4Q96LB8 373 aa6.12□□□□□ -1.43
GTF3C1-210ENST00000569394 AP1S3Q96PC3 154 aa6.12□□□□□ -1.43
GTF3C1-210ENST00000569394 BIN3Q9NQY0 253 aa6.12□□□□□ -1.43
GTF3C1-210ENST00000569394 TMEM262E9PQX1 116 aa6.11□□□□□ -1.43
GTF3C1-210ENST00000569394 TMEM250H0YL14 139 aa6.11□□□□□ -1.43
GTF3C1-210ENST00000569394 CXCL1P09341 107 aa6.11□□□□□ -1.43
GTF3C1-210ENST00000569394 RPL36AP83881 106 aaKnown RBP6.11□□□□□ -1.43
GTF3C1-210ENST00000569394 PIK3CD-AS1Q5SR53 167 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms