RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 LOC100131303A0A0U1RQF7 123 aa6.74□□□□□ -1.33
CLN6-209ENST00000569336 NDUFS6O75380 124 aaKnown RBP6.74□□□□□ -1.33
CLN6-209ENST00000569336 TOR2AQ5JU69 321 aa6.74□□□□□ -1.33
CLN6-209ENST00000569336 SPANXN1Q5VSR9 72 aa6.74□□□□□ -1.33
CLN6-209ENST00000569336 OR2D3Q8NGH3 330 aa6.74□□□□□ -1.33
CLN6-209ENST00000569336 AP1S3Q96PC3 154 aa6.74□□□□□ -1.33
CLN6-209ENST00000569336 EIF5A2Q9GZV4 153 aaKnown RBP6.74□□□□□ -1.33
CLN6-209ENST00000569336 LY96Q9Y6Y9 160 aa6.74□□□□□ -1.33
CLN6-209ENST00000569336 A0A087WWL8 130 aa6.73□□□□□ -1.33
CLN6-209ENST00000569336 TRAV8-6A0A0B4J262 113 aa6.73□□□□□ -1.33
CLN6-209ENST00000569336 C19orf71A6NCJ1 209 aa6.73□□□□□ -1.33
CLN6-209ENST00000569336 SMIM17P0DL12 118 aa6.73□□□□□ -1.33
CLN6-209ENST00000569336 EVI2AP22794 236 aa6.73□□□□□ -1.33
CLN6-209ENST00000569336 UFSP1Q6NVU6 142 aa6.73□□□□□ -1.33
CLN6-209ENST00000569336 C10orf126Q8N4M7 172 aa6.73□□□□□ -1.33
CLN6-209ENST00000569336 OR10AG1Q8NH19 301 aa6.73□□□□□ -1.33
CLN6-209ENST00000569336 ATP6V0E2Q8NHE4 81 aa6.73□□□□□ -1.33
CLN6-209ENST00000569336 FAM210AQ96ND0 272 aa6.73□□□□□ -1.33
CLN6-209ENST00000569336 SSBP4Q9BWG4 385 aaPredicted RBP6.73□□□□□ -1.33
CLN6-209ENST00000569336 A0A087WWC5 75 aa6.72□□□□□ -1.33
CLN6-209ENST00000569336 TRBV10-1A0A0K0K1A3 114 aa6.72□□□□□ -1.33
CLN6-209ENST00000569336 F2Z2F3 143 aa6.72□□□□□ -1.33
CLN6-209ENST00000569336 CEBPGP53567 150 aa6.72□□□□□ -1.33
CLN6-209ENST00000569336 CACNG7P62955 275 aa6.72□□□□□ -1.33
CLN6-209ENST00000569336 ZNF56Q15929 161 aa6.72□□□□□ -1.33
CLN6-209ENST00000569336 TEX261Q6UWH6 196 aa6.72□□□□□ -1.33
CLN6-209ENST00000569336 ZNF575Q86XF7 245 aa6.72□□□□□ -1.33
CLN6-209ENST00000569336 WFDC10BQ8IUB3 73 aa6.72□□□□□ -1.33
CLN6-209ENST00000569336 FER1L6-AS1Q8NA97 138 aa6.72□□□□□ -1.33
CLN6-209ENST00000569336 SMIM7Q9BQ49 75 aa6.72□□□□□ -1.33
CLN6-209ENST00000569336 TPPP3Q9BW30 176 aa6.72□□□□□ -1.33
CLN6-209ENST00000569336 SAMD10Q9BYL1 202 aa6.72□□□□□ -1.33
CLN6-209ENST00000569336 GTSF1LQ9H1H1 148 aa6.72□□□□□ -1.33
CLN6-209ENST00000569336 JPT2Q9H910 190 aa6.72□□□□□ -1.33
CLN6-209ENST00000569336 CRYGDP07320 174 aa6.71□□□□□ -1.34
CLN6-209ENST00000569336 IGLC6P0CF74 106 aa6.71□□□□□ -1.34
CLN6-209ENST00000569336 DNAH10OSP0CZ25 163 aa6.71□□□□□ -1.34
CLN6-209ENST00000569336 LINC00694P0DN24 101 aa6.71□□□□□ -1.34
CLN6-209ENST00000569336 RAB4BP61018 213 aa6.71□□□□□ -1.34
CLN6-209ENST00000569336 RPL36AP83881 106 aaKnown RBP6.71□□□□□ -1.34
CLN6-209ENST00000569336 OR10J3Q5JRS4 329 aa6.71□□□□□ -1.34
CLN6-209ENST00000569336 LELP1Q5T871 98 aa6.71□□□□□ -1.34
CLN6-209ENST00000569336 NFE4Q86UQ8 179 aa6.71□□□□□ -1.34
CLN6-209ENST00000569336 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.71□□□□□ -1.34
CLN6-209ENST00000569336 RPL36ALQ969Q0 106 aaKnown RBP6.71□□□□□ -1.34
CLN6-209ENST00000569336 KRTAP1-5Q9BYS1 174 aa6.71□□□□□ -1.34
CLN6-209ENST00000569336 RPP21Q9H633 154 aaKnown RBP6.71□□□□□ -1.34
CLN6-209ENST00000569336 KIAA1109Q2LD37 5005 aa6.71□□□□□ -1.34
CLN6-209ENST00000569336 IGHV3-38A0A0C4DH36 116 aa6.7□□□□□ -1.34
CLN6-209ENST00000569336 GAGE12JA6NER3 117 aa6.7□□□□□ -1.34
CLN6-209ENST00000569336 TRGC1P0CF51 173 aa6.7□□□□□ -1.34
CLN6-209ENST00000569336 GZMBP10144 247 aa6.7□□□□□ -1.34
CLN6-209ENST00000569336 CTRLP40313 264 aa6.7□□□□□ -1.34
CLN6-209ENST00000569336 LINC00315P59091 139 aa6.7□□□□□ -1.34
CLN6-209ENST00000569336 GAGE1Q13065 139 aa6.7□□□□□ -1.34
CLN6-209ENST00000569336 GAGE4Q13068 117 aa6.7□□□□□ -1.34
CLN6-209ENST00000569336 GAGE5Q13069 117 aa6.7□□□□□ -1.34
CLN6-209ENST00000569336 GAGE13Q4V321 117 aa6.7□□□□□ -1.34
CLN6-209ENST00000569336 Q6ZSN1 163 aa6.7□□□□□ -1.34
CLN6-209ENST00000569336 C14orf178Q8N769 122 aaPredicted RBP6.7□□□□□ -1.34
CLN6-209ENST00000569336 OCC1Q8TAD7 63 aa6.7□□□□□ -1.34
CLN6-209ENST00000569336 TRBV7-3A0A075B6L6 115 aa6.69□□□□□ -1.34
CLN6-209ENST00000569336 A0A1B0GVY2 172 aa6.69□□□□□ -1.34
CLN6-209ENST00000569336 ZNF727A8MUV8 499 aa6.69□□□□□ -1.34
CLN6-209ENST00000569336 F5H697 171 aa6.69□□□□□ -1.34
CLN6-209ENST00000569336 H7C1H1 209 aa6.69□□□□□ -1.34
CLN6-209ENST00000569336 K7EN84 100 aa6.69□□□□□ -1.34
CLN6-209ENST00000569336 FAM74A3Q4VXF1 159 aa6.69□□□□□ -1.34
CLN6-209ENST00000569336 LINC01556Q5JQF7 62 aa6.69□□□□□ -1.34
CLN6-209ENST00000569336 FAM231DQ6ZW35 169 aa6.69□□□□□ -1.34
CLN6-209ENST00000569336 NUDT10Q8NFP7 164 aa6.69□□□□□ -1.34
CLN6-209ENST00000569336 NUDT11Q96G61 164 aa6.69□□□□□ -1.34
CLN6-209ENST00000569336 MUC21A0A0G2JKD1 596 aa6.68□□□□□ -1.34
CLN6-209ENST00000569336 MUC21A0A140T8X8 626 aa6.68□□□□□ -1.34
CLN6-209ENST00000569336 A8MWL6 223 aa6.68□□□□□ -1.34
CLN6-209ENST00000569336 ERVFC1-1P60608 527 aa6.68□□□□□ -1.34
CLN6-209ENST00000569336 CT83Q5H943 113 aa6.68□□□□□ -1.34
CLN6-209ENST00000569336 WDR73Q6P4I2 378 aa6.68□□□□□ -1.34
CLN6-209ENST00000569336 OR10G8Q8NGN5 311 aa6.68□□□□□ -1.34
CLN6-209ENST00000569336 RNASE7Q9H1E1 156 aaKnown RBP6.68□□□□□ -1.34
CLN6-209ENST00000569336 SMDT1Q9H4I9 107 aa6.68□□□□□ -1.34
CLN6-209ENST00000569336 MSRB1Q9NZV6 116 aa6.68□□□□□ -1.34
CLN6-209ENST00000569336 URGCP-MRPS24S4R325 110 aa6.68□□□□□ -1.34
CLN6-209ENST00000569336 GATCO43716 136 aaKnown RBP6.67□□□□□ -1.34
CLN6-209ENST00000569336 MGPP08493 103 aa6.67□□□□□ -1.34
CLN6-209ENST00000569336 SRP19P09132 144 aaKnown RBP6.67□□□□□ -1.34
CLN6-209ENST00000569336 SSTP61278 116 aa6.67□□□□□ -1.34
CLN6-209ENST00000569336 TNP2Q05952 138 aa6.67□□□□□ -1.34
CLN6-209ENST00000569336 LAGE3Q14657 143 aa6.67□□□□□ -1.34
CLN6-209ENST00000569336 PEA15Q15121 130 aa6.67□□□□□ -1.34
CLN6-209ENST00000569336 LYZL1Q6UWQ5 148 aa6.67□□□□□ -1.34
CLN6-209ENST00000569336 LINC01551Q86U37 167 aa6.67□□□□□ -1.34
CLN6-209ENST00000569336 BORCS7Q96B45 105 aa6.67□□□□□ -1.34
CLN6-209ENST00000569336 CNFNQ9BYD5 112 aa6.67□□□□□ -1.34
CLN6-209ENST00000569336 DPH3P1Q9H4G8 78 aa6.67□□□□□ -1.34
CLN6-209ENST00000569336 EREGO14944 169 aa6.66□□□□□ -1.34
CLN6-209ENST00000569336 NTF3P20783 257 aa6.66□□□□□ -1.34
CLN6-209ENST00000569336 UBE2D3P61077 147 aa6.66□□□□□ -1.34
CLN6-209ENST00000569336 RAB14P61106 215 aa6.66□□□□□ -1.34
CLN6-209ENST00000569336 UBE2D2P62837 147 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms