RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 DNAH10Q8IVF4 4471 aa11.35□□□□□ -0.59
USB1-215ENST00000569252 TRGC1P0CF51 173 aa11.34□□□□□ -0.59
USB1-215ENST00000569252 NTF3P20783 257 aa11.34□□□□□ -0.59
USB1-215ENST00000569252 GTSF1Q8WW33 167 aa11.34□□□□□ -0.59
USB1-215ENST00000569252 KMT2AQ03164 3969 aa11.34□□□□□ -0.59
USB1-215ENST00000569252 A0A1B0GUT8 65 aa11.33□□□□□ -0.6
USB1-215ENST00000569252 RHODO00212 210 aa11.33□□□□□ -0.6
USB1-215ENST00000569252 RS1O15537 224 aa11.33□□□□□ -0.6
USB1-215ENST00000569252 CTRLP40313 264 aa11.33□□□□□ -0.6
USB1-215ENST00000569252 RIGQ13278 110 aa11.33□□□□□ -0.6
USB1-215ENST00000569252 RHEBQ15382 184 aa11.33□□□□□ -0.6
USB1-215ENST00000569252 CFAP126Q5VTH2 177 aa11.33□□□□□ -0.6
USB1-215ENST00000569252 CEMP1Q6PRD7 247 aaPredicted RBP11.33□□□□□ -0.6
USB1-215ENST00000569252 CLRN3Q8NCR9 226 aa11.33□□□□□ -0.6
USB1-215ENST00000569252 AP1S3Q96PC3 154 aa11.33□□□□□ -0.6
USB1-215ENST00000569252 RPS10P5Q9NQ39 176 aa11.33□□□□□ -0.6
USB1-215ENST00000569252 HHLA3Q9XRX5 114 aa11.33□□□□□ -0.6
USB1-215ENST00000569252 SMIM27A0A1W2PRY6 76 aa11.32□□□□□ -0.6
USB1-215ENST00000569252 S100PP25815 95 aa11.32□□□□□ -0.6
USB1-215ENST00000569252 FAM74A4Q5TZK3 123 aa11.32□□□□□ -0.6
USB1-215ENST00000569252 KCNIP4Q6PIL6 250 aa11.32□□□□□ -0.6
USB1-215ENST00000569252 ZFP2Q6ZN57 461 aa11.32□□□□□ -0.6
USB1-215ENST00000569252 NUP35Q8NFH5 326 aa11.32□□□□□ -0.6
USB1-215ENST00000569252 FAM210BQ96KR6 192 aa11.32□□□□□ -0.6
USB1-215ENST00000569252 IGHV4-4A0A075B6R2 117 aa11.31□□□□□ -0.6
USB1-215ENST00000569252 IGHV3-73A0A0B4J1V6 119 aa11.31□□□□□ -0.6
USB1-215ENST00000569252 IGLL5B9A064 214 aa11.31□□□□□ -0.6
USB1-215ENST00000569252 ZNF479Q96JC4 524 aa11.31□□□□□ -0.6
USB1-215ENST00000569252 A0A087WWL8 130 aa11.3□□□□□ -0.6
USB1-215ENST00000569252 C7orf77A4D0Y5 90 aa11.3□□□□□ -0.6
USB1-215ENST00000569252 F5H697 171 aa11.3□□□□□ -0.6
USB1-215ENST00000569252 NXPH4O95158 308 aa11.3□□□□□ -0.6
USB1-215ENST00000569252 C14orf178Q8N769 122 aaPredicted RBP11.3□□□□□ -0.6
USB1-215ENST00000569252 IMMP2LQ96T52 175 aa11.3□□□□□ -0.6
USB1-215ENST00000569252 TMEM242Q9NWH2 141 aa11.3□□□□□ -0.6
USB1-215ENST00000569252 PRO0255Q9UI72 69 aa11.3□□□□□ -0.6
USB1-215ENST00000569252 A0A1B0GW15 77 aa11.29□□□□□ -0.6
USB1-215ENST00000569252 PAX4O43316 350 aa11.29□□□□□ -0.6
USB1-215ENST00000569252 S100A8P05109 93 aa11.29□□□□□ -0.6
USB1-215ENST00000569252 FHL2Q14192 279 aa11.29□□□□□ -0.6
USB1-215ENST00000569252 POM121L12Q8N7R1 296 aa11.29□□□□□ -0.6
USB1-215ENST00000569252 CNFNQ9BYD5 112 aa11.29□□□□□ -0.6
USB1-215ENST00000569252 JPT2Q9H910 190 aa11.29□□□□□ -0.6
USB1-215ENST00000569252 TRAV26-1A0A087WT03 109 aa11.28□□□□□ -0.6
USB1-215ENST00000569252 A0A087WWC5 75 aa11.28□□□□□ -0.6
USB1-215ENST00000569252 HOXA5P20719 270 aa11.28□□□□□ -0.6
USB1-215ENST00000569252 TCTAP57738 103 aa11.28□□□□□ -0.6
USB1-215ENST00000569252 ZNF56Q15929 161 aa11.28□□□□□ -0.6
USB1-215ENST00000569252 PRADC1Q9BSG0 188 aa11.28□□□□□ -0.6
USB1-215ENST00000569252 MSRB1Q9NZV6 116 aa11.28□□□□□ -0.6
USB1-215ENST00000569252 A0A0J9YY99 117 aa11.27□□□□□ -0.61
USB1-215ENST00000569252 CRYGDP07320 174 aa11.27□□□□□ -0.61
USB1-215ENST00000569252 MGPP08493 103 aa11.27□□□□□ -0.61
USB1-215ENST00000569252 FAM3BP58499 235 aaPredicted RBP11.27□□□□□ -0.61
USB1-215ENST00000569252 RAB4BP61018 213 aa11.27□□□□□ -0.61
USB1-215ENST00000569252 TMEM88Q6PEY1 159 aa11.27□□□□□ -0.61
USB1-215ENST00000569252 BTF3L4Q96K17 158 aa11.27□□□□□ -0.61
USB1-215ENST00000569252 SAMD10Q9BYL1 202 aa11.27□□□□□ -0.61
USB1-215ENST00000569252 DPH3P1Q9H4G8 78 aa11.27□□□□□ -0.61
USB1-215ENST00000569252 MUC4Q99102 2169 aa11.26□□□□□ -0.61
USB1-215ENST00000569252 EVI2AP22794 236 aa11.26□□□□□ -0.61
USB1-215ENST00000569252 CRYBA4P53673 196 aa11.26□□□□□ -0.61
USB1-215ENST00000569252 C15orf53Q8NAA6 179 aa11.26□□□□□ -0.61
USB1-215ENST00000569252 TRBV6-4A0A1B0GX49 114 aa11.25□□□□□ -0.61
USB1-215ENST00000569252 H3BNG1 76 aa11.25□□□□□ -0.61
USB1-215ENST00000569252 NUDT3O95989 172 aa11.25□□□□□ -0.61
USB1-215ENST00000569252 GATA1P15976 413 aaPredicted RBP11.25□□□□□ -0.61
USB1-215ENST00000569252 CAMPP49913 170 aa11.25□□□□□ -0.61
USB1-215ENST00000569252 RHOHQ15669 191 aa11.25□□□□□ -0.61
USB1-215ENST00000569252 MRPL54Q6P161 138 aaKnown RBP11.25□□□□□ -0.61
USB1-215ENST00000569252 ATP5L2Q7Z4Y8 100 aa11.25□□□□□ -0.61
USB1-215ENST00000569252 LINC00476Q8WZB0 136 aa11.25□□□□□ -0.61
USB1-215ENST00000569252 PCLOQ9Y6V0 5065 aa11.24□□□□□ -0.61
USB1-215ENST00000569252 H7C1H1 209 aa11.24□□□□□ -0.61
USB1-215ENST00000569252 LY6G6CO95867 125 aa11.24□□□□□ -0.61
USB1-215ENST00000569252 HBBP68871 147 aa11.24□□□□□ -0.61
USB1-215ENST00000569252 SLC25A29Q8N8R3 303 aa11.24□□□□□ -0.61
USB1-215ENST00000569252 TRAV9-1A0A075B6T8 112 aa11.23□□□□□ -0.61
USB1-215ENST00000569252 MRPL23Q16540 153 aaKnown RBP11.23□□□□□ -0.61
USB1-215ENST00000569252 UFSP1Q6NVU6 142 aa11.23□□□□□ -0.61
USB1-215ENST00000569252 TMEM191AQ9H0A3 160 aa11.23□□□□□ -0.61
USB1-215ENST00000569252 ICOSQ9Y6W8 199 aa11.23□□□□□ -0.61
USB1-215ENST00000569252 URGCP-MRPS24S4R325 110 aa11.23□□□□□ -0.61
USB1-215ENST00000569252 HECTD4Q9Y4D8 3996 aa11.23□□□□□ -0.61
USB1-215ENST00000569252 K7EQD1 137 aa11.22□□□□□ -0.61
USB1-215ENST00000569252 GYPEP15421 78 aa11.22□□□□□ -0.61
USB1-215ENST00000569252 SH2D6Q7Z4S9 175 aa11.22□□□□□ -0.61
USB1-215ENST00000569252 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.22□□□□□ -0.61
USB1-215ENST00000569252 KIF25-AS1Q9Y6Z4 181 aa11.22□□□□□ -0.61
USB1-215ENST00000569252 SRIP30626 198 aa11.21□□□□□ -0.61
USB1-215ENST00000569252 KIAA1109Q2LD37 5005 aa11.2□□□□□ -0.62
USB1-215ENST00000569252 TRBV10-1A0A0K0K1A3 114 aa11.2□□□□□ -0.62
USB1-215ENST00000569252 RPL36AP83881 106 aaKnown RBP11.2□□□□□ -0.62
USB1-215ENST00000569252 FRZBQ92765 325 aa11.2□□□□□ -0.62
USB1-215ENST00000569252 RPL36ALQ969Q0 106 aaKnown RBP11.2□□□□□ -0.62
USB1-215ENST00000569252 VSIG2Q96IQ7 327 aa11.2□□□□□ -0.62
USB1-215ENST00000569252 TNFRSF18Q9Y5U5 241 aa11.2□□□□□ -0.62
USB1-215ENST00000569252 VPS13DQ5THJ4 4388 aa11.2□□□□□ -0.62
USB1-215ENST00000569252 RASL11AQ6T310 242 aa11.19□□□□□ -0.62
USB1-215ENST00000569252 Q6ZSN1 163 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms