RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 WISP1O95388 367 aa5.46□□□□□ -1.54
CNOT1-216ENST00000569240 TFF1P04155 84 aa5.46□□□□□ -1.54
CNOT1-216ENST00000569240 IGHV3-73A0A0B4J1V6 119 aa5.46□□□□□ -1.54
CNOT1-216ENST00000569240 C3orf56Q8N813 242 aa5.46□□□□□ -1.54
CNOT1-216ENST00000569240 COL11A2P13942 1736 aaPredicted RBP5.46□□□□□ -1.54
CNOT1-216ENST00000569240 MYO7AQ13402 2215 aa5.45□□□□□ -1.54
CNOT1-216ENST00000569240 CTSGP08311 255 aa5.45□□□□□ -1.54
CNOT1-216ENST00000569240 FANCMQ8IYD8 2048 aa5.45□□□□□ -1.54
CNOT1-216ENST00000569240 J3QLI3 93 aa5.45□□□□□ -1.54
CNOT1-216ENST00000569240 K7EQD1 137 aa5.45□□□□□ -1.54
CNOT1-216ENST00000569240 ZNF80P51504 273 aaPredicted RBP5.45□□□□□ -1.54
CNOT1-216ENST00000569240 SPINK13Q1W4C9 94 aa5.45□□□□□ -1.54
CNOT1-216ENST00000569240 MYLKQ15746 1914 aa5.45□□□□□ -1.54
CNOT1-216ENST00000569240 COX6B1P14854 86 aa5.45□□□□□ -1.54
CNOT1-216ENST00000569240 MAPKAPK5-AS1Q8N8E1 139 aa5.45□□□□□ -1.54
CNOT1-216ENST00000569240 IGKV1D-37A0A075B6S9 117 aa5.45□□□□□ -1.54
CNOT1-216ENST00000569240 LTBP1Q14766 1721 aa5.45□□□□□ -1.54
CNOT1-216ENST00000569240 PROK2Q9HC23 129 aa5.45□□□□□ -1.54
CNOT1-216ENST00000569240 TNS1Q9HBL0 1735 aaKnown RBP5.45□□□□□ -1.54
CNOT1-216ENST00000569240 LOXL1Q08397 574 aaPredicted RBP5.45□□□□□ -1.54
CNOT1-216ENST00000569240 CDIP1Q9H305 208 aa5.45□□□□□ -1.54
CNOT1-216ENST00000569240 COX7BP24311 80 aa5.44□□□□□ -1.54
CNOT1-216ENST00000569240 SHISA2Q6UWI4 295 aa5.44□□□□□ -1.54
CNOT1-216ENST00000569240 HHLA3Q9XRX5 114 aa5.44□□□□□ -1.54
CNOT1-216ENST00000569240 K7ERS5 55 aa5.44□□□□□ -1.54
CNOT1-216ENST00000569240 C17orf77Q96MU5 243 aa5.44□□□□□ -1.54
CNOT1-216ENST00000569240 TANC1Q9C0D5 1861 aa5.44□□□□□ -1.54
CNOT1-216ENST00000569240 MIR7-3HGQ8N6C7 128 aa5.44□□□□□ -1.54
CNOT1-216ENST00000569240 INTS1Q8N201 2190 aaKnown RBP5.44□□□□□ -1.54
CNOT1-216ENST00000569240 SRCAPQ6ZRS2 3230 aa5.44□□□□□ -1.54
CNOT1-216ENST00000569240 IGLV2-23P01705 113 aa5.44□□□□□ -1.54
CNOT1-216ENST00000569240 AHCTF1Q8WYP5 2266 aa5.44□□□□□ -1.54
CNOT1-216ENST00000569240 CGB3P0DN86 165 aa5.44□□□□□ -1.54
CNOT1-216ENST00000569240 CGB7P0DN87 165 aa5.44□□□□□ -1.54
CNOT1-216ENST00000569240 SPTSSBQ8NFR3 76 aa5.44□□□□□ -1.54
CNOT1-216ENST00000569240 C16orf74Q96GX8 76 aa5.44□□□□□ -1.54
CNOT1-216ENST00000569240 ETDCA0A1B0GVM5 59 aa5.43□□□□□ -1.54
CNOT1-216ENST00000569240 SAA4P35542 130 aa5.43□□□□□ -1.54
CNOT1-216ENST00000569240 RS1O15537 224 aa5.43□□□□□ -1.54
CNOT1-216ENST00000569240 RNF185Q96GF1 192 aa5.43□□□□□ -1.54
CNOT1-216ENST00000569240 DNAJC13O75165 2243 aa5.43□□□□□ -1.54
CNOT1-216ENST00000569240 CCKP06307 115 aa5.43□□□□□ -1.54
CNOT1-216ENST00000569240 GNLYP22749 145 aa5.43□□□□□ -1.54
CNOT1-216ENST00000569240 ENHOQ6UWT2 76 aa5.43□□□□□ -1.54
CNOT1-216ENST00000569240 A0A1W2PRX2 142 aa5.43□□□□□ -1.54
CNOT1-216ENST00000569240 PMAIP1Q13794 54 aa5.43□□□□□ -1.54
CNOT1-216ENST00000569240 POLR2AP24928 1970 aaKnown RBP5.43□□□□□ -1.54
CNOT1-216ENST00000569240 SBSPONQ8IVN8 264 aa5.43□□□□□ -1.54
CNOT1-216ENST00000569240 DPH3Q96FX2 82 aa5.43□□□□□ -1.54
CNOT1-216ENST00000569240 H3BUX3 64 aa5.43□□□□□ -1.54
CNOT1-216ENST00000569240 K7ENP7 123 aa5.43□□□□□ -1.54
CNOT1-216ENST00000569240 GNRH2O43555 120 aa5.43□□□□□ -1.54
CNOT1-216ENST00000569240 IGFL3Q6UXB1 125 aa5.43□□□□□ -1.54
CNOT1-216ENST00000569240 LYPD2Q6UXB3 125 aa5.42□□□□□ -1.54
CNOT1-216ENST00000569240 LINC01560Q8TB33 94 aa5.42□□□□□ -1.54
CNOT1-216ENST00000569240 PATE3B3GLJ2 98 aa5.42□□□□□ -1.54
CNOT1-216ENST00000569240 F8WDY8 70 aa5.42□□□□□ -1.54
CNOT1-216ENST00000569240 WIPF1O43516 503 aa5.42□□□□□ -1.54
CNOT1-216ENST00000569240 MRGPRG-AS1Q2M3A8 158 aa5.42□□□□□ -1.54
CNOT1-216ENST00000569240 GPHB5Q86YW7 130 aa5.42□□□□□ -1.54
CNOT1-216ENST00000569240 TPSG1Q9NRR2 321 aa5.42□□□□□ -1.54
CNOT1-216ENST00000569240 RNF114Q9Y508 228 aa5.42□□□□□ -1.54
CNOT1-216ENST00000569240 XIRP1Q702N8 1843 aaKnown RBP5.42□□□□□ -1.54
CNOT1-216ENST00000569240 HEATR1Q9H583 2144 aaKnown RBP5.42□□□□□ -1.54
CNOT1-216ENST00000569240 RPL39P62891 51 aaKnown RBP5.42□□□□□ -1.54
CNOT1-216ENST00000569240 IGLV4-3A0A075B6K6 122 aa5.42□□□□□ -1.54
CNOT1-216ENST00000569240 A0A1B0GW54 56 aa5.42□□□□□ -1.54
CNOT1-216ENST00000569240 RPL28P46779 137 aaKnown RBP5.42□□□□□ -1.54
CNOT1-216ENST00000569240 Q0VFX4 171 aa5.42□□□□□ -1.54
CNOT1-216ENST00000569240 WFDC11Q8NEX6 87 aa5.42□□□□□ -1.54
CNOT1-216ENST00000569240 MPLKIPQ8TAP9 179 aa5.42□□□□□ -1.54
CNOT1-216ENST00000569240 KMT2EQ8IZD2 1858 aa5.42□□□□□ -1.54
CNOT1-216ENST00000569240 XCL1P47992 114 aa5.41□□□□□ -1.54
CNOT1-216ENST00000569240 INSL3P51460 131 aa5.41□□□□□ -1.54
CNOT1-216ENST00000569240 XCL2Q9UBD3 114 aa5.41□□□□□ -1.54
CNOT1-216ENST00000569240 KLK9Q9UKQ9 250 aa5.41□□□□□ -1.54
CNOT1-216ENST00000569240 LINC00322Q6ZN03 302 aaPredicted RBP5.41□□□□□ -1.54
CNOT1-216ENST00000569240 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.41□□□□□ -1.54
CNOT1-216ENST00000569240 IGKV2-29A2NJV5 120 aaPredicted RBP5.41□□□□□ -1.54
CNOT1-216ENST00000569240 IGLV1-47P01700 117 aa5.41□□□□□ -1.54
CNOT1-216ENST00000569240 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.41□□□□□ -1.54
CNOT1-216ENST00000569240 SNRNP200O75643 2136 aaKnown RBP5.41□□□□□ -1.54
CNOT1-216ENST00000569240 LINC01546A6NGU7 62 aa5.41□□□□□ -1.54
CNOT1-216ENST00000569240 TICRRQ7Z2Z1 1910 aa5.41□□□□□ -1.54
CNOT1-216ENST00000569240 CXCL6P80162 114 aa5.41□□□□□ -1.54
CNOT1-216ENST00000569240 A0A0G2JNJ9 132 aa5.4□□□□□ -1.54
CNOT1-216ENST00000569240 Q9UFV3 132 aa5.4□□□□□ -1.54
CNOT1-216ENST00000569240 WDR90Q96KV7 1748 aa5.4□□□□□ -1.54
CNOT1-216ENST00000569240 ASXL3Q9C0F0 2248 aa5.4□□□□□ -1.54
CNOT1-216ENST00000569240 A6NED7 52 aa5.4□□□□□ -1.54
CNOT1-216ENST00000569240 PI4KAP42356 2102 aa5.4□□□□□ -1.54
CNOT1-216ENST00000569240 COX17Q14061 63 aa5.4□□□□□ -1.54
CNOT1-216ENST00000569240 ASPHD1Q5U4P2 390 aa5.4□□□□□ -1.54
CNOT1-216ENST00000569240 LIMD2Q9BT23 127 aa5.4□□□□□ -1.54
CNOT1-216ENST00000569240 POLR2KP53803 58 aaKnown RBP5.4□□□□□ -1.55
CNOT1-216ENST00000569240 APOC4P55056 127 aa5.4□□□□□ -1.55
CNOT1-216ENST00000569240 COL4A5P29400 1685 aa5.4□□□□□ -1.55
CNOT1-216ENST00000569240 WNK2Q9Y3S1 2297 aa5.4□□□□□ -1.55
CNOT1-216ENST00000569240 CCL24O00175 119 aa5.4□□□□□ -1.55
CNOT1-216ENST00000569240 PPDPFQ9H3Y8 114 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms