RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 MT-ND4LP03901 98 aa6.39□□□□□ -1.39
CHD9-219ENST00000569225 TRGC1P0CF51 173 aa6.39□□□□□ -1.39
CHD9-219ENST00000569225 CRYBA4P53673 196 aa6.39□□□□□ -1.39
CHD9-219ENST00000569225 SSTP61278 116 aa6.39□□□□□ -1.39
CHD9-219ENST00000569225 FAM74A4Q5TZK3 123 aa6.39□□□□□ -1.39
CHD9-219ENST00000569225 GTSF1Q8WW33 167 aa6.39□□□□□ -1.39
CHD9-219ENST00000569225 SEC11CQ9BY50 192 aa6.39□□□□□ -1.39
CHD9-219ENST00000569225 V9GYV3 84 aa6.39□□□□□ -1.39
CHD9-219ENST00000569225 TENM2Q9NT68 2774 aa6.39□□□□□ -1.39
CHD9-219ENST00000569225 IGHV3-73A0A0B4J1V6 119 aa6.39□□□□□ -1.39
CHD9-219ENST00000569225 TRBV6-4A0A1B0GX49 114 aa6.39□□□□□ -1.39
CHD9-219ENST00000569225 GATA1P15976 413 aaPredicted RBP6.39□□□□□ -1.39
CHD9-219ENST00000569225 FOXA3P55318 350 aaPredicted RBP6.39□□□□□ -1.39
CHD9-219ENST00000569225 SMIM15Q7Z3B0 74 aa6.39□□□□□ -1.39
CHD9-219ENST00000569225 PRADC1Q9BSG0 188 aa6.39□□□□□ -1.39
CHD9-219ENST00000569225 CNFNQ9BYD5 112 aa6.39□□□□□ -1.39
CHD9-219ENST00000569225 NAT8BQ9UHF3 227 aa6.39□□□□□ -1.39
CHD9-219ENST00000569225 ICOSQ9Y6W8 199 aa6.39□□□□□ -1.39
CHD9-219ENST00000569225 A0A087WWL8 130 aa6.38□□□□□ -1.39
CHD9-219ENST00000569225 HIGD1CA8MV81 97 aa6.38□□□□□ -1.39
CHD9-219ENST00000569225 P0DMU3 169 aa6.38□□□□□ -1.39
CHD9-219ENST00000569225 FAM231AP0DMU4 169 aa6.38□□□□□ -1.39
CHD9-219ENST00000569225 FAM231CP0DMU5 169 aa6.38□□□□□ -1.39
CHD9-219ENST00000569225 RHOHQ15669 191 aa6.38□□□□□ -1.39
CHD9-219ENST00000569225 TWIST1Q15672 202 aa6.38□□□□□ -1.39
CHD9-219ENST00000569225 VSIG2Q96IQ7 327 aa6.38□□□□□ -1.39
CHD9-219ENST00000569225 PGLYRP4Q96LB8 373 aa6.38□□□□□ -1.39
CHD9-219ENST00000569225 JPT2Q9H910 190 aa6.38□□□□□ -1.39
CHD9-219ENST00000569225 CRYGDP07320 174 aa6.37□□□□□ -1.39
CHD9-219ENST00000569225 ADCYAP1P18509 176 aa6.37□□□□□ -1.39
CHD9-219ENST00000569225 NTF3P20783 257 aa6.37□□□□□ -1.39
CHD9-219ENST00000569225 MRPL23Q16540 153 aaKnown RBP6.37□□□□□ -1.39
CHD9-219ENST00000569225 UFSP1Q6NVU6 142 aa6.37□□□□□ -1.39
CHD9-219ENST00000569225 SH2D6Q7Z4S9 175 aa6.37□□□□□ -1.39
CHD9-219ENST00000569225 C14orf178Q8N769 122 aaPredicted RBP6.37□□□□□ -1.39
CHD9-219ENST00000569225 ANAPC16Q96DE5 110 aa6.37□□□□□ -1.39
CHD9-219ENST00000569225 SAMD10Q9BYL1 202 aa6.37□□□□□ -1.39
CHD9-219ENST00000569225 CSMD3Q7Z407 3707 aa6.37□□□□□ -1.39
CHD9-219ENST00000569225 A0A1B0GUT8 65 aa6.36□□□□□ -1.39
CHD9-219ENST00000569225 SMIM27A0A1W2PRY6 76 aa6.36□□□□□ -1.39
CHD9-219ENST00000569225 GYPEP15421 78 aa6.36□□□□□ -1.39
CHD9-219ENST00000569225 SRIP30626 198 aa6.36□□□□□ -1.39
CHD9-219ENST00000569225 RAB4BP61018 213 aa6.36□□□□□ -1.39
CHD9-219ENST00000569225 ZNF56Q15929 161 aa6.36□□□□□ -1.39
CHD9-219ENST00000569225 NDUFA5Q16718 116 aa6.36□□□□□ -1.39
CHD9-219ENST00000569225 SLC25A29Q8N8R3 303 aa6.36□□□□□ -1.39
CHD9-219ENST00000569225 F5H697 171 aa6.36□□□□□ -1.39
CHD9-219ENST00000569225 K7EQD1 137 aa6.36□□□□□ -1.39
CHD9-219ENST00000569225 CCL18P55774 89 aa6.36□□□□□ -1.39
CHD9-219ENST00000569225 RIGQ13278 110 aa6.36□□□□□ -1.39
CHD9-219ENST00000569225 RNF212Q495C1 297 aa6.36□□□□□ -1.39
CHD9-219ENST00000569225 LGALS9CQ6DKI2 356 aa6.36□□□□□ -1.39
CHD9-219ENST00000569225 UBE2DNLQ8IWF7 75 aa6.36□□□□□ -1.39
CHD9-219ENST00000569225 DPH3P1Q9H4G8 78 aa6.36□□□□□ -1.39
CHD9-219ENST00000569225 MSRB1Q9NZV6 116 aa6.36□□□□□ -1.39
CHD9-219ENST00000569225 CARHSP1Q9Y2V2 147 aaKnown RBP6.36□□□□□ -1.39
CHD9-219ENST00000569225 STARD9Q9P2P6 4700 aa6.36□□□□□ -1.39
CHD9-219ENST00000569225 LCE6AA0A183 80 aa6.35□□□□□ -1.39
CHD9-219ENST00000569225 A0A1B0GW15 77 aa6.35□□□□□ -1.39
CHD9-219ENST00000569225 H7C1H1 209 aa6.35□□□□□ -1.39
CHD9-219ENST00000569225 LY6G6CO95867 125 aa6.35□□□□□ -1.39
CHD9-219ENST00000569225 MGPP08493 103 aa6.35□□□□□ -1.39
CHD9-219ENST00000569225 C10orf91Q5T1B1 145 aa6.35□□□□□ -1.39
CHD9-219ENST00000569225 NUP35Q8NFH5 326 aa6.35□□□□□ -1.39
CHD9-219ENST00000569225 LINC00476Q8WZB0 136 aa6.35□□□□□ -1.39
CHD9-219ENST00000569225 CTDSP1Q9GZU7 261 aa6.35□□□□□ -1.39
CHD9-219ENST00000569225 MUC4Q99102 2169 aa6.35□□□□□ -1.39
CHD9-219ENST00000569225 A0A096LPF7 62 aa6.34□□□□□ -1.39
CHD9-219ENST00000569225 TRBV10-1A0A0K0K1A3 114 aa6.34□□□□□ -1.39
CHD9-219ENST00000569225 S100A8P05109 93 aa6.34□□□□□ -1.39
CHD9-219ENST00000569225 EVI2AP22794 236 aa6.34□□□□□ -1.39
CHD9-219ENST00000569225 FAM3BP58499 235 aaPredicted RBP6.34□□□□□ -1.39
CHD9-219ENST00000569225 MAJINQ3KP22 176 aa6.34□□□□□ -1.39
CHD9-219ENST00000569225 Q6ZSN1 163 aa6.34□□□□□ -1.39
CHD9-219ENST00000569225 NEGR1Q7Z3B1 354 aa6.34□□□□□ -1.39
CHD9-219ENST00000569225 KIF25-AS1Q9Y6Z4 181 aa6.34□□□□□ -1.39
CHD9-219ENST00000569225 DYNC2H1Q8NCM8 4307 aaKnown RBP6.34□□□□□ -1.39
CHD9-219ENST00000569225 RHEBQ15382 184 aa6.34□□□□□ -1.39
CHD9-219ENST00000569225 RPL36AP83881 106 aaKnown RBP6.33□□□□□ -1.4
CHD9-219ENST00000569225 KCNIP4Q6PIL6 250 aa6.33□□□□□ -1.4
CHD9-219ENST00000569225 SVBPQ8N300 66 aa6.33□□□□□ -1.4
CHD9-219ENST00000569225 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.33□□□□□ -1.4
CHD9-219ENST00000569225 RPL36ALQ969Q0 106 aaKnown RBP6.33□□□□□ -1.4
CHD9-219ENST00000569225 IMMP2LQ96T52 175 aa6.33□□□□□ -1.4
CHD9-219ENST00000569225 LOC100131303A0A0U1RQF7 123 aa6.32□□□□□ -1.4
CHD9-219ENST00000569225 GAGE12JA6NER3 117 aa6.32□□□□□ -1.4
CHD9-219ENST00000569225 APOC3P02656 99 aa6.32□□□□□ -1.4
CHD9-219ENST00000569225 LINC00315P59091 139 aa6.32□□□□□ -1.4
CHD9-219ENST00000569225 GAGE1Q13065 139 aa6.32□□□□□ -1.4
CHD9-219ENST00000569225 GAGE4Q13068 117 aa6.32□□□□□ -1.4
CHD9-219ENST00000569225 GAGE5Q13069 117 aa6.32□□□□□ -1.4
CHD9-219ENST00000569225 GAGE13Q4V321 117 aa6.32□□□□□ -1.4
CHD9-219ENST00000569225 ATP5L2Q7Z4Y8 100 aa6.32□□□□□ -1.4
CHD9-219ENST00000569225 TMEM191AQ9H0A3 160 aa6.32□□□□□ -1.4
CHD9-219ENST00000569225 SNAPINO95295 136 aa6.32□□□□□ -1.4
CHD9-219ENST00000569225 S100PP25815 95 aa6.32□□□□□ -1.4
CHD9-219ENST00000569225 TIRAPP58753 221 aa6.32□□□□□ -1.4
CHD9-219ENST00000569225 HBBP68871 147 aa6.32□□□□□ -1.4
CHD9-219ENST00000569225 SUMO4Q6EEV6 95 aa6.32□□□□□ -1.4
CHD9-219ENST00000569225 CLRN3Q8NCR9 226 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms