RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 TRGV1A0A0A0MS02 117 aa7.43□□□□□ -1.22
CDH3-210ENST00000569117 M0R381 172 aa7.43□□□□□ -1.22
CDH3-210ENST00000569117 SPART-AS1P0CW21 52 aa7.43□□□□□ -1.22
CDH3-210ENST00000569117 S100A1P23297 94 aa7.43□□□□□ -1.22
CDH3-210ENST00000569117 CACNG7P62955 275 aa7.43□□□□□ -1.22
CDH3-210ENST00000569117 ZNF876PQ49A33 203 aa7.43□□□□□ -1.22
CDH3-210ENST00000569117 WDR73Q6P4I2 378 aa7.43□□□□□ -1.22
CDH3-210ENST00000569117 ATRAIDQ6UW56 229 aa7.43□□□□□ -1.22
CDH3-210ENST00000569117 NUP35Q8NFH5 326 aa7.43□□□□□ -1.22
CDH3-210ENST00000569117 BORCS7Q96B45 105 aa7.43□□□□□ -1.22
CDH3-210ENST00000569117 PGLYRP4Q96LB8 373 aa7.43□□□□□ -1.22
CDH3-210ENST00000569117 C18orf15Q96N68 181 aa7.43□□□□□ -1.22
CDH3-210ENST00000569117 EDA2RQ9HAV5 297 aa7.43□□□□□ -1.22
CDH3-210ENST00000569117 TRAV9-1A0A075B6T8 112 aa7.42□□□□□ -1.22
CDH3-210ENST00000569117 A0A1B0GUT8 65 aa7.42□□□□□ -1.22
CDH3-210ENST00000569117 GAGE12BA1L429 117 aa7.42□□□□□ -1.22
CDH3-210ENST00000569117 CXorf65A6NEN9 183 aa7.42□□□□□ -1.22
CDH3-210ENST00000569117 GAGE7O76087 117 aa7.42□□□□□ -1.22
CDH3-210ENST00000569117 GAGE12FP0CL80 117 aa7.42□□□□□ -1.22
CDH3-210ENST00000569117 GAGE12GP0CL81 117 aa7.42□□□□□ -1.22
CDH3-210ENST00000569117 GAGE12IP0CL82 117 aa7.42□□□□□ -1.22
CDH3-210ENST00000569117 SPANXN1Q5VSR9 72 aa7.42□□□□□ -1.22
CDH3-210ENST00000569117 KCNIP4Q6PIL6 250 aa7.42□□□□□ -1.22
CDH3-210ENST00000569117 MUC21A0A0G2JKD1 596 aa7.41□□□□□ -1.22
CDH3-210ENST00000569117 MUC21A0A140T8X8 626 aa7.41□□□□□ -1.22
CDH3-210ENST00000569117 GAGE10A6NGK3 116 aa7.41□□□□□ -1.22
CDH3-210ENST00000569117 S100PP25815 95 aa7.41□□□□□ -1.22
CDH3-210ENST00000569117 DAD1P61803 113 aa7.41□□□□□ -1.22
CDH3-210ENST00000569117 ATP5L2Q7Z4Y8 100 aa7.41□□□□□ -1.22
CDH3-210ENST00000569117 C11orf45Q8TAV5 145 aa7.41□□□□□ -1.22
CDH3-210ENST00000569117 AP1S3Q96PC3 154 aa7.41□□□□□ -1.22
CDH3-210ENST00000569117 TRGV2A0A075B6R0 118 aa7.4□□□□□ -1.22
CDH3-210ENST00000569117 TRAV4A0A0B4J268 109 aa7.4□□□□□ -1.22
CDH3-210ENST00000569117 A0A1B0GW15 77 aa7.4□□□□□ -1.22
CDH3-210ENST00000569117 A0A1B0GXF2 115 aa7.4□□□□□ -1.22
CDH3-210ENST00000569117 A8MWV9 139 aa7.4□□□□□ -1.22
CDH3-210ENST00000569117 TRGC1P0CF51 173 aa7.4□□□□□ -1.22
CDH3-210ENST00000569117 DEFB130BP0DP73 79 aa7.4□□□□□ -1.22
CDH3-210ENST00000569117 DEFB130AP0DP74 79 aa7.4□□□□□ -1.22
CDH3-210ENST00000569117 NTF3P20783 257 aa7.4□□□□□ -1.22
CDH3-210ENST00000569117 BTF3L4Q96K17 158 aa7.4□□□□□ -1.22
CDH3-210ENST00000569117 MSRB1Q9NZV6 116 aa7.4□□□□□ -1.22
CDH3-210ENST00000569117 RHODO00212 210 aa7.39□□□□□ -1.23
CDH3-210ENST00000569117 RS1O15537 224 aa7.39□□□□□ -1.23
CDH3-210ENST00000569117 HBBP68871 147 aa7.39□□□□□ -1.23
CDH3-210ENST00000569117 RIGQ13278 110 aa7.39□□□□□ -1.23
CDH3-210ENST00000569117 TWIST1Q15672 202 aa7.39□□□□□ -1.23
CDH3-210ENST00000569117 C12orf74Q32Q52 190 aa7.39□□□□□ -1.23
CDH3-210ENST00000569117 CFAP126Q5VTH2 177 aa7.39□□□□□ -1.23
CDH3-210ENST00000569117 MRPL54Q6P161 138 aaKnown RBP7.39□□□□□ -1.23
CDH3-210ENST00000569117 URGCP-MRPS24S4R325 110 aa7.39□□□□□ -1.23
CDH3-210ENST00000569117 CIDEAO60543 219 aa7.38□□□□□ -1.23
CDH3-210ENST00000569117 S100A8P05109 93 aa7.38□□□□□ -1.23
CDH3-210ENST00000569117 ATP5G1P05496 136 aa7.38□□□□□ -1.23
CDH3-210ENST00000569117 SSTP61278 116 aa7.38□□□□□ -1.23
CDH3-210ENST00000569117 ZFP2Q6ZN57 461 aa7.38□□□□□ -1.23
CDH3-210ENST00000569117 Q6ZTC4 211 aa7.38□□□□□ -1.23
CDH3-210ENST00000569117 CBLN2Q8IUK8 224 aa7.38□□□□□ -1.23
CDH3-210ENST00000569117 POM121L12Q8N7R1 296 aa7.38□□□□□ -1.23
CDH3-210ENST00000569117 GATD1Q8NB37 220 aa7.38□□□□□ -1.23
CDH3-210ENST00000569117 OR4C5Q8NGB2 326 aa7.38□□□□□ -1.23
CDH3-210ENST00000569117 YPEL4Q96NS1 127 aa7.38□□□□□ -1.23
CDH3-210ENST00000569117 JPT2Q9H910 190 aa7.38□□□□□ -1.23
CDH3-210ENST00000569117 SMCO4Q9NRQ5 59 aa7.38□□□□□ -1.23
CDH3-210ENST00000569117 KIF25-AS1Q9Y6Z4 181 aa7.38□□□□□ -1.23
CDH3-210ENST00000569117 TRBV24-1A0A075B6N3 115 aa7.37□□□□□ -1.23
CDH3-210ENST00000569117 CRYGDP07320 174 aa7.37□□□□□ -1.23
CDH3-210ENST00000569117 NANOS2P60321 138 aaKnown RBP7.37□□□□□ -1.23
CDH3-210ENST00000569117 ELOBQ15370 118 aa7.37□□□□□ -1.23
CDH3-210ENST00000569117 UFSP1Q6NVU6 142 aa7.37□□□□□ -1.23
CDH3-210ENST00000569117 TMEM88Q6PEY1 159 aa7.37□□□□□ -1.23
CDH3-210ENST00000569117 RASL11AQ6T310 242 aa7.37□□□□□ -1.23
CDH3-210ENST00000569117 ZNF479Q96JC4 524 aa7.37□□□□□ -1.23
CDH3-210ENST00000569117 SAMD10Q9BYL1 202 aa7.37□□□□□ -1.23
CDH3-210ENST00000569117 TMEM191AQ9H0A3 160 aa7.37□□□□□ -1.23
CDH3-210ENST00000569117 DPH3P1Q9H4G8 78 aa7.37□□□□□ -1.23
CDH3-210ENST00000569117 TGP01266 2768 aa7.37□□□□□ -1.23
CDH3-210ENST00000569117 EVI2AP22794 236 aa7.36□□□□□ -1.23
CDH3-210ENST00000569117 FAM74A4Q5TZK3 123 aa7.36□□□□□ -1.23
CDH3-210ENST00000569117 SMIM15Q7Z3B0 74 aa7.36□□□□□ -1.23
CDH3-210ENST00000569117 C14orf178Q8N769 122 aaPredicted RBP7.36□□□□□ -1.23
CDH3-210ENST00000569117 TGIF2-C20orf24A0A0A6YYL0 155 aa7.35□□□□□ -1.23
CDH3-210ENST00000569117 IGHV3-53P01767 116 aa7.35□□□□□ -1.23
CDH3-210ENST00000569117 SMIM17P0DL12 118 aa7.35□□□□□ -1.23
CDH3-210ENST00000569117 HOXA5P20719 270 aa7.35□□□□□ -1.23
CDH3-210ENST00000569117 CAMPP49913 170 aa7.35□□□□□ -1.23
CDH3-210ENST00000569117 LINC00315P59091 139 aa7.35□□□□□ -1.23
CDH3-210ENST00000569117 ZNF56Q15929 161 aa7.35□□□□□ -1.23
CDH3-210ENST00000569117 TRAV10A0A0B4J240 114 aa7.34□□□□□ -1.23
CDH3-210ENST00000569117 TRGV4A0A0C4DH28 118 aa7.34□□□□□ -1.23
CDH3-210ENST00000569117 SCO1O75880 301 aa7.34□□□□□ -1.23
CDH3-210ENST00000569117 MGPP08493 103 aa7.34□□□□□ -1.23
CDH3-210ENST00000569117 GATA1P15976 413 aaPredicted RBP7.34□□□□□ -1.23
CDH3-210ENST00000569117 RAB4BP61018 213 aa7.34□□□□□ -1.23
CDH3-210ENST00000569117 FHL2Q14192 279 aa7.34□□□□□ -1.23
CDH3-210ENST00000569117 COX19Q49B96 90 aa7.34□□□□□ -1.23
CDH3-210ENST00000569117 DEFB131BA0A096LNP1 70 aa7.33□□□□□ -1.24
CDH3-210ENST00000569117 IGHV3-73A0A0B4J1V6 119 aa7.33□□□□□ -1.24
CDH3-210ENST00000569117 TRBV6-4A0A1B0GX49 114 aa7.33□□□□□ -1.24
CDH3-210ENST00000569117 F5H768 121 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms