RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 C1orf43Q9BWL3 253 aa10.24□□□□□ -0.77
HERPUD1-215ENST00000568676 WFDC1Q9HC57 220 aa10.24□□□□□ -0.77
HERPUD1-215ENST00000568676 UBR4Q5T4S7 5183 aa10.23□□□□□ -0.77
HERPUD1-215ENST00000568676 CXorf1O96002 111 aa10.23□□□□□ -0.77
HERPUD1-215ENST00000568676 SERF2P84101 59 aa10.23□□□□□ -0.77
HERPUD1-215ENST00000568676 OR11H4Q8NGC9 324 aa10.23□□□□□ -0.77
HERPUD1-215ENST00000568676 PSMG3Q9BT73 122 aaPredicted RBP10.23□□□□□ -0.77
HERPUD1-215ENST00000568676 Q9UF83 564 aa10.23□□□□□ -0.77
HERPUD1-215ENST00000568676 A0A1W2PRE2 83 aa10.22□□□□□ -0.77
HERPUD1-215ENST00000568676 B4DEV8 164 aa10.22□□□□□ -0.77
HERPUD1-215ENST00000568676 RPL36AP83881 106 aaKnown RBP10.22□□□□□ -0.77
HERPUD1-215ENST00000568676 INO80EQ8NBZ0 244 aaPredicted RBP10.22□□□□□ -0.77
HERPUD1-215ENST00000568676 RPL36ALQ969Q0 106 aaKnown RBP10.22□□□□□ -0.77
HERPUD1-215ENST00000568676 JPT2Q9H910 190 aa10.22□□□□□ -0.77
HERPUD1-215ENST00000568676 FAT3Q8TDW7 4589 aa10.22□□□□□ -0.77
HERPUD1-215ENST00000568676 CRPP02741 224 aa10.21□□□□□ -0.77
HERPUD1-215ENST00000568676 PKIAP61925 76 aa10.21□□□□□ -0.77
HERPUD1-215ENST00000568676 FAM74A4Q5TZK3 123 aa10.21□□□□□ -0.77
HERPUD1-215ENST00000568676 DGAT2L7PQ6IED9 249 aa10.21□□□□□ -0.77
HERPUD1-215ENST00000568676 SFRP2Q96HF1 295 aa10.21□□□□□ -0.77
HERPUD1-215ENST00000568676 DNAJC30Q96LL9 226 aa10.21□□□□□ -0.77
HERPUD1-215ENST00000568676 ARL2-SNX15V9GYD0 113 aa10.21□□□□□ -0.77
HERPUD1-215ENST00000568676 TRBV7-3A0A075B6L6 115 aa10.2□□□□□ -0.78
HERPUD1-215ENST00000568676 H3BVH4 76 aa10.2□□□□□ -0.78
HERPUD1-215ENST00000568676 ARMS2P0C7Q2 107 aa10.2□□□□□ -0.78
HERPUD1-215ENST00000568676 AQP10Q96PS8 301 aa10.2□□□□□ -0.78
HERPUD1-215ENST00000568676 NKX6-2Q9C056 277 aaPredicted RBP10.2□□□□□ -0.78
HERPUD1-215ENST00000568676 PHLDA3Q9Y5J5 127 aa10.2□□□□□ -0.78
HERPUD1-215ENST00000568676 FXYD6-FXYD2A0A087WZ82 144 aa10.19□□□□□ -0.78
HERPUD1-215ENST00000568676 UBE2D3P61077 147 aa10.19□□□□□ -0.78
HERPUD1-215ENST00000568676 UBE2D2P62837 147 aa10.19□□□□□ -0.78
HERPUD1-215ENST00000568676 COX8CQ7Z4L0 72 aa10.19□□□□□ -0.78
HERPUD1-215ENST00000568676 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.19□□□□□ -0.78
HERPUD1-215ENST00000568676 ACTR3CQ9C0K3 210 aaPredicted RBP10.19□□□□□ -0.78
HERPUD1-215ENST00000568676 TNFSF18Q9UNG2 199 aa10.19□□□□□ -0.78
HERPUD1-215ENST00000568676 TRBV6-8A0A0A6YYG3 113 aa10.18□□□□□ -0.78
HERPUD1-215ENST00000568676 KRBOX1C9JBD0 128 aa10.18□□□□□ -0.78
HERPUD1-215ENST00000568676 TMEM262E9PQX1 116 aa10.18□□□□□ -0.78
HERPUD1-215ENST00000568676 TPT1P13693 172 aaKnown RBP10.18□□□□□ -0.78
HERPUD1-215ENST00000568676 MIAQ16674 131 aa10.18□□□□□ -0.78
HERPUD1-215ENST00000568676 HSD17B11Q8NBQ5 300 aa10.18□□□□□ -0.78
HERPUD1-215ENST00000568676 OR10G8Q8NGN5 311 aa10.18□□□□□ -0.78
HERPUD1-215ENST00000568676 HIST1H2BAQ96A08 127 aa10.18□□□□□ -0.78
HERPUD1-215ENST00000568676 DAZAP1Q96EP5 407 aaKnown RBP10.18□□□□□ -0.78
HERPUD1-215ENST00000568676 ZFP30Q9Y2G7 519 aa10.18□□□□□ -0.78
HERPUD1-215ENST00000568676 IFNA7P01567 189 aa10.17□□□□□ -0.78
HERPUD1-215ENST00000568676 ATP6V0CP27449 155 aa10.17□□□□□ -0.78
HERPUD1-215ENST00000568676 Q5BKY6 102 aa10.17□□□□□ -0.78
HERPUD1-215ENST00000568676 ENHOQ6UWT2 76 aa10.17□□□□□ -0.78
HERPUD1-215ENST00000568676 Q6ZRU5 148 aa10.17□□□□□ -0.78
HERPUD1-215ENST00000568676 Q86TA4 180 aa10.17□□□□□ -0.78
HERPUD1-215ENST00000568676 ZFP82Q8N141 532 aa10.17□□□□□ -0.78
HERPUD1-215ENST00000568676 C9orf163Q8N9P6 203 aa10.17□□□□□ -0.78
HERPUD1-215ENST00000568676 A0A087WWL8 130 aa10.16□□□□□ -0.78
HERPUD1-215ENST00000568676 TRAV34A0A0B4J273 112 aa10.16□□□□□ -0.78
HERPUD1-215ENST00000568676 USP17L23D6RBM5 183 aa10.16□□□□□ -0.78
HERPUD1-215ENST00000568676 RPL19P84098 196 aaKnown RBP10.16□□□□□ -0.78
HERPUD1-215ENST00000568676 FAM162BQ5T6X4 162 aa10.16□□□□□ -0.78
HERPUD1-215ENST00000568676 ZC2HC1AQ96GY0 325 aa10.16□□□□□ -0.78
HERPUD1-215ENST00000568676 BORCS7-ASMTA0A0B4J1R7 106 aa10.15□□□□□ -0.78
HERPUD1-215ENST00000568676 A0A0D9SG52 128 aa10.15□□□□□ -0.78
HERPUD1-215ENST00000568676 PEX7O00628 323 aa10.15□□□□□ -0.78
HERPUD1-215ENST00000568676 ANGP03950 147 aaKnown RBP10.15□□□□□ -0.78
HERPUD1-215ENST00000568676 TMEM97Q5BJF2 176 aa10.15□□□□□ -0.78
HERPUD1-215ENST00000568676 C15orf54Q8N8G6 183 aa10.15□□□□□ -0.78
HERPUD1-215ENST00000568676 M0R036 132 aa10.14□□□□□ -0.79
HERPUD1-215ENST00000568676 M0R381 172 aa10.14□□□□□ -0.79
HERPUD1-215ENST00000568676 SH2D1AO60880 128 aa10.14□□□□□ -0.79
HERPUD1-215ENST00000568676 HLA-DQA1P01909 254 aa10.14□□□□□ -0.79
HERPUD1-215ENST00000568676 CRIP1P50238 77 aa10.14□□□□□ -0.79
HERPUD1-215ENST00000568676 HNRNPA3P51991 378 aaKnown RBP10.14□□□□□ -0.79
HERPUD1-215ENST00000568676 RAB4BP61018 213 aa10.14□□□□□ -0.79
HERPUD1-215ENST00000568676 LINC01559Q495D7 138 aa10.14□□□□□ -0.79
HERPUD1-215ENST00000568676 FMC1Q96HJ9 113 aa10.14□□□□□ -0.79
HERPUD1-215ENST00000568676 GRIFINA4D1Z8 144 aa10.13□□□□□ -0.79
HERPUD1-215ENST00000568676 ARPC5O15511 151 aa10.13□□□□□ -0.79
HERPUD1-215ENST00000568676 PRSS1P07477 247 aa10.13□□□□□ -0.79
HERPUD1-215ENST00000568676 MPV17L2Q567V2 206 aa10.13□□□□□ -0.79
HERPUD1-215ENST00000568676 CLRN3Q8NCR9 226 aa10.13□□□□□ -0.79
HERPUD1-215ENST00000568676 TCEAL7Q9BRU2 100 aa10.13□□□□□ -0.79
HERPUD1-215ENST00000568676 CTXND1A0A1B0GTU2 59 aa10.12□□□□□ -0.79
HERPUD1-215ENST00000568676 MT1HL1P0DM35 61 aa10.12□□□□□ -0.79
HERPUD1-215ENST00000568676 UBE2G1P62253 170 aa10.12□□□□□ -0.79
HERPUD1-215ENST00000568676 ZNF674Q2M3X9 581 aa10.12□□□□□ -0.79
HERPUD1-215ENST00000568676 CHCHD5Q9BSY4 110 aa10.12□□□□□ -0.79
HERPUD1-215ENST00000568676 PRR34Q9NV39 138 aa10.12□□□□□ -0.79
HERPUD1-215ENST00000568676 PKHD1L1Q86WI1 4243 aa10.12□□□□□ -0.79
HERPUD1-215ENST00000568676 TRBV6-1A0A0K0K1D8 114 aa10.11□□□□□ -0.79
HERPUD1-215ENST00000568676 HMSDA8MTL9 139 aa10.11□□□□□ -0.79
HERPUD1-215ENST00000568676 G3V3Q6 166 aa10.11□□□□□ -0.79
HERPUD1-215ENST00000568676 Q6ZNX1 250 aa10.11□□□□□ -0.79
HERPUD1-215ENST00000568676 FAM74A7A6NL05 159 aa10.1□□□□□ -0.79
HERPUD1-215ENST00000568676 SMLR1H3BR10 107 aa10.1□□□□□ -0.79
HERPUD1-215ENST00000568676 CIRBPQ14011 172 aaKnown RBP10.1□□□□□ -0.79
HERPUD1-215ENST00000568676 ZNF345Q14585 488 aa10.1□□□□□ -0.79
HERPUD1-215ENST00000568676 RPL7L1Q6DKI1 246 aaKnown RBP10.1□□□□□ -0.79
HERPUD1-215ENST00000568676 PRR27Q6MZM9 219 aa10.1□□□□□ -0.79
HERPUD1-215ENST00000568676 SDIM1Q6ZPB5 146 aa10.1□□□□□ -0.79
HERPUD1-215ENST00000568676 NEXN-AS1Q8NBZ9 246 aa10.1□□□□□ -0.79
HERPUD1-215ENST00000568676 RNF185Q96GF1 192 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms