RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 TRAV8-6A0A0B4J262 113 aa3.19□□□□□ -1.9
HERPUD1-213ENST00000568358 TRAV4A0A0B4J268 109 aa3.19□□□□□ -1.9
HERPUD1-213ENST00000568358 K7EQD1 137 aa3.19□□□□□ -1.9
HERPUD1-213ENST00000568358 TAAR5O14804 337 aa3.19□□□□□ -1.9
HERPUD1-213ENST00000568358 GNRH2O43555 120 aa3.19□□□□□ -1.9
HERPUD1-213ENST00000568358 PSCAO43653 123 aa3.19□□□□□ -1.9
HERPUD1-213ENST00000568358 PFN1P07737 140 aaKnown RBP3.19□□□□□ -1.9
HERPUD1-213ENST00000568358 SFTA3P0C7M3 94 aa3.19□□□□□ -1.9
HERPUD1-213ENST00000568358 AMTP48728 403 aa3.19□□□□□ -1.9
HERPUD1-213ENST00000568358 ZFP69Q49AA0 526 aa3.19□□□□□ -1.9
HERPUD1-213ENST00000568358 PRR9Q5T870 116 aa3.19□□□□□ -1.9
HERPUD1-213ENST00000568358 GOLT1AQ6ZVE7 132 aa3.19□□□□□ -1.9
HERPUD1-213ENST00000568358 ASB13Q8WXK3 278 aa3.19□□□□□ -1.9
HERPUD1-213ENST00000568358 KRTAP9-3Q9BYQ3 159 aa3.19□□□□□ -1.9
HERPUD1-213ENST00000568358 Q9HAA7 133 aa3.19□□□□□ -1.9
HERPUD1-213ENST00000568358 A0A1B0GW15 77 aa3.18□□□□□ -1.9
HERPUD1-213ENST00000568358 EPM2AB3EWF7 344 aa3.18□□□□□ -1.9
HERPUD1-213ENST00000568358 CXorf1O96002 111 aa3.18□□□□□ -1.9
HERPUD1-213ENST00000568358 CRYGDP07320 174 aa3.18□□□□□ -1.9
HERPUD1-213ENST00000568358 PMCHP20382 165 aa3.18□□□□□ -1.9
HERPUD1-213ENST00000568358 KRTAP10-2P60368 255 aa3.18□□□□□ -1.9
HERPUD1-213ENST00000568358 SERF2P84101 59 aa3.18□□□□□ -1.9
HERPUD1-213ENST00000568358 LAGE3Q14657 143 aa3.18□□□□□ -1.9
HERPUD1-213ENST00000568358 TDRG1Q3Y452 100 aa3.18□□□□□ -1.9
HERPUD1-213ENST00000568358 ZNF876PQ49A33 203 aa3.18□□□□□ -1.9
HERPUD1-213ENST00000568358 Q6ZQT7 251 aa3.18□□□□□ -1.9
HERPUD1-213ENST00000568358 Q8N1X5 172 aa3.18□□□□□ -1.9
HERPUD1-213ENST00000568358 KRTAP1-5Q9BYS1 174 aa3.18□□□□□ -1.9
HERPUD1-213ENST00000568358 MED28Q9H204 178 aa3.18□□□□□ -1.9
HERPUD1-213ENST00000568358 TMEM167BQ9NRX6 74 aa3.18□□□□□ -1.9
HERPUD1-213ENST00000568358 KIAA1109Q2LD37 5005 aa3.18□□□□□ -1.9
HERPUD1-213ENST00000568358 PCLOQ9Y6V0 5065 aa3.18□□□□□ -1.9
HERPUD1-213ENST00000568358 PKHD1P08F94 4074 aa3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 BORCS7-ASMTA0A0B4J1R7 106 aa3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 IGHV3-16A0A0C4DH30 117 aa3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 IGHV3-38A0A0C4DH36 116 aa3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 F6UZH7 168 aa3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 HMGB3O15347 200 aaKnown RBP3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 OXTP01178 125 aa3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 IFNA7P01567 189 aa3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 TYMSP04818 313 aa3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 DNAH10OSP0CZ25 163 aa3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 ARL14EPLP0DKL9 152 aa3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 S100A4P26447 101 aaKnown RBP3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 HNRNPA3P51991 378 aaKnown RBP3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 XGP55808 180 aa3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 RAB2AP61019 212 aa3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 IFITM3Q01628 133 aa3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 OR10J3Q5JRS4 329 aa3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 PRNTQ86SH4 94 aa3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 C5orf17Q8NAS9 161 aa3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 HSD17B11Q8NBQ5 300 aa3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 FRZBQ92765 325 aa3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 PSMG3Q9BT73 122 aaPredicted RBP3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 NKX6-2Q9C056 277 aaPredicted RBP3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 ACTR3CQ9C0K3 210 aaPredicted RBP3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 WFDC1Q9HC57 220 aa3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 HERC2O95714 4834 aa3.17□□□□□ -1.9
HERPUD1-213ENST00000568358 A0A087WTM6 91 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 TRAV8-1A0A0A6YYK1 113 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 IGHV3-73A0A0B4J1V6 119 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 TRBV6-4A0A1B0GX49 114 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 FABP5P3A8MUU1 101 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 EIF3GO75821 320 aaKnown RBP eCLIP3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 ATP5LO75964 103 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 GCGP01275 180 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 TCRAP04437 139 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 MGST1P10620 155 aaKnown RBP3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 GCHFRP30047 84 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 FGF8P55075 233 aaPredicted RBP3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 GNG5P63218 68 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 FLI1Q01543 452 aaPredicted RBP3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 RHOHQ15669 191 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 LGALSLQ3ZCW2 172 aaPredicted RBP3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 SUMO4Q6EEV6 95 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 Q6ZRN7 208 aaPredicted RBP3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 WFDC10BQ8IUB3 73 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 CYB561D1Q8N8Q1 229 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 SLC25A29Q8N8R3 303 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 OR2G3Q8NGZ4 309 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 ATP6V0E2Q8NHE4 81 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 MPLKIPQ8TAP9 179 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 ISOC2Q96AB3 205 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 BATF3Q9NR55 127 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 EPDR1Q9UM22 224 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 TNFSF18Q9UNG2 199 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 PSG8Q9UQ74 426 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 ALG5Q9Y673 324 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 DNAH2Q9P225 4427 aa3.16□□□□□ -1.9
HERPUD1-213ENST00000568358 FAT2Q9NYQ8 4349 aa3.15□□□□□ -1.9
HERPUD1-213ENST00000568358 DNAH17Q9UFH2 4485 aa3.15□□□□□ -1.9
HERPUD1-213ENST00000568358 IGLV5-52A0A0A0MRZ9 124 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 IGLV9-49A0A0B4J1Y8 123 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 LOC100131303A0A0U1RQF7 123 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 A0A1W2PRE2 83 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 A8MWV9 139 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 SMLR1H3BR10 107 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 M0QXV9 152 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 PTTG1O95997 202 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 SEC11BP0C7V7 166 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms