RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 A0A0J9YXV3 536 aa7.45□□□□□ -1.22
CLK3-222ENST00000568232 USP17L23D6RBM5 183 aa7.45□□□□□ -1.22
CLK3-222ENST00000568232 SULT1A2P50226 295 aa7.45□□□□□ -1.22
CLK3-222ENST00000568232 HBG1P69891 147 aa7.45□□□□□ -1.22
CLK3-222ENST00000568232 HBG2P69892 147 aa7.45□□□□□ -1.22
CLK3-222ENST00000568232 ZNF876PQ49A33 203 aa7.45□□□□□ -1.22
CLK3-222ENST00000568232 ATRAIDQ6UW56 229 aa7.45□□□□□ -1.22
CLK3-222ENST00000568232 ZC2HC1AQ96GY0 325 aa7.45□□□□□ -1.22
CLK3-222ENST00000568232 GGACTQ9BVM4 153 aa7.45□□□□□ -1.22
CLK3-222ENST00000568232 OR51M1Q9H341 326 aa7.45□□□□□ -1.22
CLK3-222ENST00000568232 SLC39A9Q9NUM3 307 aa7.45□□□□□ -1.22
CLK3-222ENST00000568232 URGCP-MRPS24S4R325 110 aa7.45□□□□□ -1.22
CLK3-222ENST00000568232 IGSF23A1L1A6 192 aa7.44□□□□□ -1.22
CLK3-222ENST00000568232 FAM24AA6NFZ4 105 aa7.44□□□□□ -1.22
CLK3-222ENST00000568232 PHOX2AO14813 284 aa7.44□□□□□ -1.22
CLK3-222ENST00000568232 LINC00694P0DN24 101 aa7.44□□□□□ -1.22
CLK3-222ENST00000568232 RAB2AP61019 212 aa7.44□□□□□ -1.22
CLK3-222ENST00000568232 GCSAMLQ5JQS6 135 aa7.44□□□□□ -1.22
CLK3-222ENST00000568232 CYB561D1Q8N8Q1 229 aa7.44□□□□□ -1.22
CLK3-222ENST00000568232 SLC25A2Q9BXI2 301 aa7.44□□□□□ -1.22
CLK3-222ENST00000568232 KRTAP4-9Q9BYQ8 210 aa7.44□□□□□ -1.22
CLK3-222ENST00000568232 SMDT1Q9H4I9 107 aa7.44□□□□□ -1.22
CLK3-222ENST00000568232 NBEAP1P0C6P0 100 aa7.43□□□□□ -1.22
CLK3-222ENST00000568232 MGST1P10620 155 aaKnown RBP7.43□□□□□ -1.22
CLK3-222ENST00000568232 SULT1A1P50225 295 aa7.43□□□□□ -1.22
CLK3-222ENST00000568232 RPL7L1Q6DKI1 246 aaKnown RBP7.43□□□□□ -1.22
CLK3-222ENST00000568232 DGAT2L7PQ6IED9 249 aa7.43□□□□□ -1.22
CLK3-222ENST00000568232 TMED6Q8WW62 240 aa7.43□□□□□ -1.22
CLK3-222ENST00000568232 DPH3Q96FX2 82 aa7.43□□□□□ -1.22
CLK3-222ENST00000568232 SAMD10Q9BYL1 202 aa7.43□□□□□ -1.22
CLK3-222ENST00000568232 A0A087WYN8 130 aa7.42□□□□□ -1.22
CLK3-222ENST00000568232 CIDEAO60543 219 aa7.42□□□□□ -1.22
CLK3-222ENST00000568232 CST7O76096 145 aa7.42□□□□□ -1.22
CLK3-222ENST00000568232 RPL29P47914 159 aaKnown RBP7.42□□□□□ -1.22
CLK3-222ENST00000568232 CIRBPQ14011 172 aaKnown RBP7.42□□□□□ -1.22
CLK3-222ENST00000568232 ATP6V1FQ16864 119 aa7.42□□□□□ -1.22
CLK3-222ENST00000568232 WDR73Q6P4I2 378 aa7.42□□□□□ -1.22
CLK3-222ENST00000568232 TMEM252Q8N6L7 170 aa7.42□□□□□ -1.22
CLK3-222ENST00000568232 C1orf43Q9BWL3 253 aa7.42□□□□□ -1.22
CLK3-222ENST00000568232 SH3BGRL3Q9H299 93 aa7.42□□□□□ -1.22
CLK3-222ENST00000568232 WDR83OSQ9Y284 106 aa7.42□□□□□ -1.22
CLK3-222ENST00000568232 KIF25-AS1Q9Y6Z4 181 aa7.42□□□□□ -1.22
CLK3-222ENST00000568232 A0A087WWC5 75 aa7.41□□□□□ -1.22
CLK3-222ENST00000568232 RBAKDNA6NC62 111 aa7.41□□□□□ -1.22
CLK3-222ENST00000568232 PGPEP1LA6NFU8 196 aa7.41□□□□□ -1.22
CLK3-222ENST00000568232 HLA-DQA1P01909 254 aa7.41□□□□□ -1.22
CLK3-222ENST00000568232 CHTF8P0CG12 524 aa7.41□□□□□ -1.22
CLK3-222ENST00000568232 ENHOQ6UWT2 76 aa7.41□□□□□ -1.22
CLK3-222ENST00000568232 MIR17HGQ75NE6 70 aa7.41□□□□□ -1.22
CLK3-222ENST00000568232 LYPD6BQ8NI32 183 aa7.41□□□□□ -1.22
CLK3-222ENST00000568232 SCGB1C1Q8TD33 95 aa7.41□□□□□ -1.22
CLK3-222ENST00000568232 FAM167A-AS1Q96KT0 104 aa7.41□□□□□ -1.22
CLK3-222ENST00000568232 ATP5SQ99766 215 aa7.41□□□□□ -1.22
CLK3-222ENST00000568232 SDF2L1Q9HCN8 221 aa7.41□□□□□ -1.22
CLK3-222ENST00000568232 A0A087WX48 190 aa7.4□□□□□ -1.22
CLK3-222ENST00000568232 DIRC3C9JPN6 131 aa7.4□□□□□ -1.22
CLK3-222ENST00000568232 F6UZH7 168 aa7.4□□□□□ -1.22
CLK3-222ENST00000568232 CSN1S1P47710 185 aa7.4□□□□□ -1.22
CLK3-222ENST00000568232 RANP62826 216 aaKnown RBP7.4□□□□□ -1.22
CLK3-222ENST00000568232 SERF2P84101 59 aa7.4□□□□□ -1.22
CLK3-222ENST00000568232 NHLH2Q02577 135 aa7.4□□□□□ -1.22
CLK3-222ENST00000568232 Q0VG73 95 aa7.4□□□□□ -1.22
CLK3-222ENST00000568232 PEA15Q15121 130 aa7.4□□□□□ -1.22
CLK3-222ENST00000568232 ZNF506Q5JVG8 444 aa7.4□□□□□ -1.22
CLK3-222ENST00000568232 FAM74A1Q5RGS3 127 aa7.4□□□□□ -1.22
CLK3-222ENST00000568232 SVBPQ8N300 66 aa7.4□□□□□ -1.22
CLK3-222ENST00000568232 FXYD5Q96DB9 178 aa7.4□□□□□ -1.22
CLK3-222ENST00000568232 TRAV21A0A0B4J279 112 aa7.39□□□□□ -1.23
CLK3-222ENST00000568232 UBE2L5PA0A1B0GUS4 154 aa7.39□□□□□ -1.23
CLK3-222ENST00000568232 LOC105371267A0A1B0GV96 52 aa7.39□□□□□ -1.23
CLK3-222ENST00000568232 TMEM218A2RU14 115 aa7.39□□□□□ -1.23
CLK3-222ENST00000568232 C14orf178Q8N769 122 aaPredicted RBP7.39□□□□□ -1.23
CLK3-222ENST00000568232 OR5C1Q8NGR4 320 aa7.39□□□□□ -1.23
CLK3-222ENST00000568232 TVP23CQ96ET8 276 aa7.39□□□□□ -1.23
CLK3-222ENST00000568232 PSMG3Q9BT73 122 aaPredicted RBP7.39□□□□□ -1.23
CLK3-222ENST00000568232 UQCC1Q9NVA1 299 aa7.39□□□□□ -1.23
CLK3-222ENST00000568232 LENEPQ9Y5L5 61 aa7.39□□□□□ -1.23
CLK3-222ENST00000568232 MBP02144 154 aa7.38□□□□□ -1.23
CLK3-222ENST00000568232 RPL19P84098 196 aaKnown RBP7.38□□□□□ -1.23
CLK3-222ENST00000568232 ELOBQ15370 118 aa7.38□□□□□ -1.23
CLK3-222ENST00000568232 AKR1C8PQ5T2L2 129 aa7.38□□□□□ -1.23
CLK3-222ENST00000568232 OR10G9Q8NGN4 311 aa7.38□□□□□ -1.23
CLK3-222ENST00000568232 OR2G3Q8NGZ4 309 aa7.38□□□□□ -1.23
CLK3-222ENST00000568232 KCNS1Q96KK3 526 aa7.38□□□□□ -1.23
CLK3-222ENST00000568232 SEC11CQ9BY50 192 aa7.38□□□□□ -1.23
CLK3-222ENST00000568232 SMIM3Q9BZL3 60 aa7.38□□□□□ -1.23
CLK3-222ENST00000568232 C11orf21Q9P2W6 132 aa7.38□□□□□ -1.23
CLK3-222ENST00000568232 KRTAP9-7A8MTY7 169 aa7.37□□□□□ -1.23
CLK3-222ENST00000568232 TAGLN2P37802 199 aaKnown RBP7.37□□□□□ -1.23
CLK3-222ENST00000568232 PRR3P79522 188 aaKnown RBP7.37□□□□□ -1.23
CLK3-222ENST00000568232 C15orf54Q8N8G6 183 aa7.37□□□□□ -1.23
CLK3-222ENST00000568232 C7orf33Q8WU49 177 aa7.37□□□□□ -1.23
CLK3-222ENST00000568232 LINC00479Q96M42 142 aa7.37□□□□□ -1.23
CLK3-222ENST00000568232 C9orf85Q96MD7 179 aa7.37□□□□□ -1.23
CLK3-222ENST00000568232 PARLQ9H300 379 aa7.37□□□□□ -1.23
CLK3-222ENST00000568232 WFDC1Q9HC57 220 aa7.37□□□□□ -1.23
CLK3-222ENST00000568232 TRAV1-1A0A0B4J248 108 aa7.36□□□□□ -1.23
CLK3-222ENST00000568232 PGPA6NDG6 321 aa7.36□□□□□ -1.23
CLK3-222ENST00000568232 TMEM262E9PQX1 116 aa7.36□□□□□ -1.23
CLK3-222ENST00000568232 SNAPINO95295 136 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms