RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 B4DSR2 109 aa9.58□□□□□ -0.88
CSPG4P13-202ENST00000567704 H3BT86 120 aa9.58□□□□□ -0.88
CSPG4P13-202ENST00000567704 TANC2Q9HCD6 1990 aa9.58□□□□□ -0.88
CSPG4P13-202ENST00000567704 NCKAP5O14513 1909 aa9.58□□□□□ -0.88
CSPG4P13-202ENST00000567704 PCDH15Q96QU1 1955 aa9.58□□□□□ -0.88
CSPG4P13-202ENST00000567704 C1orf229Q6ZS94 237 aaPredicted RBP9.58□□□□□ -0.88
CSPG4P13-202ENST00000567704 IGHV7-81A0A0B4J1V7 117 aa9.57□□□□□ -0.88
CSPG4P13-202ENST00000567704 LGALS9O00182 355 aa9.57□□□□□ -0.88
CSPG4P13-202ENST00000567704 IGHV1-69P01742 117 aa9.57□□□□□ -0.88
CSPG4P13-202ENST00000567704 DEFB1P60022 68 aa9.57□□□□□ -0.88
CSPG4P13-202ENST00000567704 EIF4EBP1Q13541 118 aaPredicted RBP9.57□□□□□ -0.88
CSPG4P13-202ENST00000567704 MSMPQ1L6U9 139 aa9.57□□□□□ -0.88
CSPG4P13-202ENST00000567704 ANKHD1Q8IWZ3 2542 aaKnown RBP9.57□□□□□ -0.88
CSPG4P13-202ENST00000567704 KIAA1549Q9HCM3 1950 aa9.57□□□□□ -0.88
CSPG4P13-202ENST00000567704 TEX49A0A1B0GTD5 131 aa9.56□□□□□ -0.88
CSPG4P13-202ENST00000567704 RPL32P62910 135 aaKnown RBP9.56□□□□□ -0.88
CSPG4P13-202ENST00000567704 LY6DQ14210 128 aa9.56□□□□□ -0.88
CSPG4P13-202ENST00000567704 TIMM17AQ99595 171 aa9.56□□□□□ -0.88
CSPG4P13-202ENST00000567704 OPRPNQ99935 248 aaPredicted RBP9.56□□□□□ -0.88
CSPG4P13-202ENST00000567704 DSCR8Q96T75 97 aa9.56□□□□□ -0.88
CSPG4P13-202ENST00000567704 TTC28Q96AY4 2481 aa9.55□□□□□ -0.88
CSPG4P13-202ENST00000567704 ORMDL1Q9P0S3 153 aa9.55□□□□□ -0.88
CSPG4P13-202ENST00000567704 PRB1P04280 392 aa9.55□□□□□ -0.88
CSPG4P13-202ENST00000567704 INSL3P51460 131 aa9.54□□□□□ -0.88
CSPG4P13-202ENST00000567704 NSUN5P1Q3KNT7 163 aa9.54□□□□□ -0.88
CSPG4P13-202ENST00000567704 CGB3P0DN86 165 aa9.54□□□□□ -0.88
CSPG4P13-202ENST00000567704 CGB7P0DN87 165 aa9.54□□□□□ -0.88
CSPG4P13-202ENST00000567704 NPBQ8NG41 125 aa9.54□□□□□ -0.88
CSPG4P13-202ENST00000567704 COL4A4P53420 1690 aaPredicted RBP9.54□□□□□ -0.88
CSPG4P13-202ENST00000567704 CMC4P56277 68 aaPredicted RBP9.54□□□□□ -0.88
CSPG4P13-202ENST00000567704 C9orf47Q6ZRZ4 202 aa9.54□□□□□ -0.88
CSPG4P13-202ENST00000567704 DKK4Q9UBT3 224 aa9.54□□□□□ -0.88
CSPG4P13-202ENST00000567704 WDR87Q6ZQQ6 2873 aa9.53□□□□□ -0.88
CSPG4P13-202ENST00000567704 TRAV25A0A0B4J276 109 aa9.53□□□□□ -0.88
CSPG4P13-202ENST00000567704 IGLV1-47P01700 117 aa9.53□□□□□ -0.88
CSPG4P13-202ENST00000567704 IGLC6P0CF74 106 aa9.53□□□□□ -0.88
CSPG4P13-202ENST00000567704 SLC25A29Q8N8R3 303 aa9.53□□□□□ -0.88
CSPG4P13-202ENST00000567704 SND1-IT1Q9HBX3 110 aa9.53□□□□□ -0.88
CSPG4P13-202ENST00000567704 FAM208BQ5VWN6 2430 aa9.53□□□□□ -0.88
CSPG4P13-202ENST00000567704 CRYGBP07316 175 aa9.53□□□□□ -0.88
CSPG4P13-202ENST00000567704 CRIP1P50238 77 aa9.53□□□□□ -0.88
CSPG4P13-202ENST00000567704 HCFC1P51610 2035 aa9.53□□□□□ -0.88
CSPG4P13-202ENST00000567704 C16orf54Q6UWD8 224 aa9.52□□□□□ -0.89
CSPG4P13-202ENST00000567704 IGFL3Q6UXB1 125 aa9.52□□□□□ -0.89
CSPG4P13-202ENST00000567704 TMEM258P61165 79 aa9.52□□□□□ -0.89
CSPG4P13-202ENST00000567704 KIF26AQ9ULI4 1882 aaPredicted RBP9.52□□□□□ -0.89
CSPG4P13-202ENST00000567704 IGHV3-30-3P0DP02 117 aa9.52□□□□□ -0.89
CSPG4P13-202ENST00000567704 C5orf38Q86SI9 138 aa9.52□□□□□ -0.89
CSPG4P13-202ENST00000567704 U3KQE9 123 aa9.52□□□□□ -0.89
CSPG4P13-202ENST00000567704 KIAA1549LQ6ZVL6 1849 aa9.51□□□□□ -0.89
CSPG4P13-202ENST00000567704 LINC00643Q86TS7 51 aa9.51□□□□□ -0.89
CSPG4P13-202ENST00000567704 Q8N7P7 452 aa9.51□□□□□ -0.89
CSPG4P13-202ENST00000567704 FANCD2OSQ96PS1 177 aa9.51□□□□□ -0.89
CSPG4P13-202ENST00000567704 HOXB4P17483 251 aaPredicted RBP9.51□□□□□ -0.89
CSPG4P13-202ENST00000567704 CLPSL2Q6UWE3 100 aa9.51□□□□□ -0.89
CSPG4P13-202ENST00000567704 SPATA25Q9BR10 227 aa9.51□□□□□ -0.89
CSPG4P13-202ENST00000567704 C2orf16Q68DN1 1984 aa9.51□□□□□ -0.89
CSPG4P13-202ENST00000567704 CENPVL3A0A0U1RRI6 287 aa9.51□□□□□ -0.89
CSPG4P13-202ENST00000567704 H0YGX0 51 aa9.51□□□□□ -0.89
CSPG4P13-202ENST00000567704 XGP55808 180 aa9.51□□□□□ -0.89
CSPG4P13-202ENST00000567704 MSMBP08118 114 aa9.5□□□□□ -0.89
CSPG4P13-202ENST00000567704 NAV3Q8IVL0 2385 aa9.5□□□□□ -0.89
CSPG4P13-202ENST00000567704 CSPG4Q6UVK1 2322 aa9.5□□□□□ -0.89
CSPG4P13-202ENST00000567704 MYCNOSP40205 109 aa9.5□□□□□ -0.89
CSPG4P13-202ENST00000567704 ZFHX2Q9C0A1 2572 aaPredicted RBP9.5□□□□□ -0.89
CSPG4P13-202ENST00000567704 WISP2O76076 250 aa9.5□□□□□ -0.89
CSPG4P13-202ENST00000567704 NEXN-AS1Q8NBZ9 246 aa9.5□□□□□ -0.89
CSPG4P13-202ENST00000567704 A0A0J9YY99 117 aa9.49□□□□□ -0.89
CSPG4P13-202ENST00000567704 Q8N9W7 124 aa9.49□□□□□ -0.89
CSPG4P13-202ENST00000567704 LECT2O14960 151 aa9.49□□□□□ -0.89
CSPG4P13-202ENST00000567704 XCL1P47992 114 aa9.49□□□□□ -0.89
CSPG4P13-202ENST00000567704 UFSP1Q6NVU6 142 aa9.49□□□□□ -0.89
CSPG4P13-202ENST00000567704 C20orf203Q8NBC4 194 aa9.49□□□□□ -0.89
CSPG4P13-202ENST00000567704 TRAV4A0A0B4J268 109 aa9.49□□□□□ -0.89
CSPG4P13-202ENST00000567704 URB1-AS1Q96HZ7 61 aa9.49□□□□□ -0.89
CSPG4P13-202ENST00000567704 IGHV1-58A0A0C4DH39 117 aa9.49□□□□□ -0.89
CSPG4P13-202ENST00000567704 WT1P19544 449 aaPredicted RBP9.49□□□□□ -0.89
CSPG4P13-202ENST00000567704 AJUBAQ96IF1 538 aa9.49□□□□□ -0.89
CSPG4P13-202ENST00000567704 Q9HAA7 133 aa9.49□□□□□ -0.89
CSPG4P13-202ENST00000567704 F8WEM9 126 aa9.48□□□□□ -0.89
CSPG4P13-202ENST00000567704 NBL1P41271 181 aa9.48□□□□□ -0.89
CSPG4P13-202ENST00000567704 Q71RC1 249 aaPredicted RBP9.48□□□□□ -0.89
CSPG4P13-202ENST00000567704 PTPN13Q12923 2485 aa9.48□□□□□ -0.89
CSPG4P13-202ENST00000567704 LINC01619G3V211 115 aa9.48□□□□□ -0.89
CSPG4P13-202ENST00000567704 CEMP1Q6PRD7 247 aaPredicted RBP9.48□□□□□ -0.89
CSPG4P13-202ENST00000567704 A0A096LPF7 62 aa9.48□□□□□ -0.89
CSPG4P13-202ENST00000567704 A0A0J9YXY3 114 aa9.48□□□□□ -0.89
CSPG4P13-202ENST00000567704 PSMB8P28062 276 aa9.48□□□□□ -0.89
CSPG4P13-202ENST00000567704 UTRNP46939 3433 aa9.48□□□□□ -0.89
CSPG4P13-202ENST00000567704 TMEM131Q92545 1883 aa9.48□□□□□ -0.89
CSPG4P13-202ENST00000567704 TNRC6BQ9UPQ9 1833 aaKnown RBP9.48□□□□□ -0.89
CSPG4P13-202ENST00000567704 CFAP126Q5VTH2 177 aa9.48□□□□□ -0.89
CSPG4P13-202ENST00000567704 MAPK1IP1LQ8NDC0 245 aa9.48□□□□□ -0.89
CSPG4P13-202ENST00000567704 PLA2G2CQ5R387 149 aa9.47□□□□□ -0.89
CSPG4P13-202ENST00000567704 U3KQK5 164 aa9.47□□□□□ -0.89
CSPG4P13-202ENST00000567704 SORL1Q92673 2214 aa9.47□□□□□ -0.89
CSPG4P13-202ENST00000567704 DSCR9P59020 149 aa9.47□□□□□ -0.89
CSPG4P13-202ENST00000567704 PTPRSQ13332 1948 aa9.47□□□□□ -0.89
CSPG4P13-202ENST00000567704 DAZAP2Q15038 168 aaPredicted RBP9.47□□□□□ -0.89
CSPG4P13-202ENST00000567704 RNF185Q96GF1 192 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms