RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 SMIM17P0DL12 118 aa8.06□□□□□ -1.12
PDXDC1-214ENST00000566633 RNASE3P12724 160 aaKnown RBP8.06□□□□□ -1.12
PDXDC1-214ENST00000566633 ODF1Q14990 250 aa8.06□□□□□ -1.12
PDXDC1-214ENST00000566633 BOD1L2Q8IYS8 172 aa8.06□□□□□ -1.12
PDXDC1-214ENST00000566633 C16orf95Q9H693 158 aa8.06□□□□□ -1.12
PDXDC1-214ENST00000566633 KRTAP10-3P60369 221 aa8.05□□□□□ -1.12
PDXDC1-214ENST00000566633 NSUN5P1Q3KNT7 163 aa8.05□□□□□ -1.12
PDXDC1-214ENST00000566633 WFDC12Q8WWY7 111 aa8.05□□□□□ -1.12
PDXDC1-214ENST00000566633 PRSS1P07477 247 aa8.05□□□□□ -1.12
PDXDC1-214ENST00000566633 C14orf178Q8N769 122 aaPredicted RBP8.05□□□□□ -1.12
PDXDC1-214ENST00000566633 JMJD8Q96S16 334 aa8.05□□□□□ -1.12
PDXDC1-214ENST00000566633 DPH3P1Q9H4G8 78 aa8.05□□□□□ -1.12
PDXDC1-214ENST00000566633 HHLA3Q9XRX5 114 aa8.05□□□□□ -1.12
PDXDC1-214ENST00000566633 PROK1P58294 105 aa8.04□□□□□ -1.12
PDXDC1-214ENST00000566633 RASL10AQ92737 203 aa8.04□□□□□ -1.12
PDXDC1-214ENST00000566633 ATP5LO75964 103 aa8.04□□□□□ -1.12
PDXDC1-214ENST00000566633 OR9G4Q8NGQ1 327 aa8.04□□□□□ -1.12
PDXDC1-214ENST00000566633 SMIM2Q9BVW6 85 aa8.04□□□□□ -1.12
PDXDC1-214ENST00000566633 CCL24O00175 119 aa8.03□□□□□ -1.12
PDXDC1-214ENST00000566633 LGALS9O00182 355 aa8.03□□□□□ -1.12
PDXDC1-214ENST00000566633 TAX1BP3O14907 124 aa8.03□□□□□ -1.12
PDXDC1-214ENST00000566633 ZNF688P0C7X2 276 aa8.03□□□□□ -1.12
PDXDC1-214ENST00000566633 TCTAP57738 103 aa8.03□□□□□ -1.12
PDXDC1-214ENST00000566633 C20orf78Q9BR46 151 aa8.03□□□□□ -1.12
PDXDC1-214ENST00000566633 NXPH4O95158 308 aa8.03□□□□□ -1.12
PDXDC1-214ENST00000566633 SUMO2P61956 95 aaKnown RBP8.03□□□□□ -1.12
PDXDC1-214ENST00000566633 TSSC4Q9Y5U2 329 aaPredicted RBP8.03□□□□□ -1.12
PDXDC1-214ENST00000566633 SIVA1O15304 175 aa8.02□□□□□ -1.13
PDXDC1-214ENST00000566633 TMEM97Q5BJF2 176 aa8.02□□□□□ -1.13
PDXDC1-214ENST00000566633 PSMG4Q5JS54 123 aa8.02□□□□□ -1.13
PDXDC1-214ENST00000566633 PCP2Q8IVA1 136 aa8.02□□□□□ -1.13
PDXDC1-214ENST00000566633 POM121L12Q8N7R1 296 aa8.02□□□□□ -1.13
PDXDC1-214ENST00000566633 TENM1Q9UKZ4 2725 aa8.02□□□□□ -1.13
PDXDC1-214ENST00000566633 TRRAPQ9Y4A5 3859 aa8.02□□□□□ -1.13
PDXDC1-214ENST00000566633 K7EQG2 157 aa8.02□□□□□ -1.13
PDXDC1-214ENST00000566633 CCL25O15444 150 aa8.02□□□□□ -1.13
PDXDC1-214ENST00000566633 IGKCP01834 107 aa8.02□□□□□ -1.13
PDXDC1-214ENST00000566633 FAM159AQ6UWV7 190 aa8.02□□□□□ -1.13
PDXDC1-214ENST00000566633 RPL39LQ96EH5 51 aaKnown RBP8.02□□□□□ -1.13
PDXDC1-214ENST00000566633 KIF25-AS1Q9Y6Z4 181 aa8.02□□□□□ -1.13
PDXDC1-214ENST00000566633 IGKV3-20P01619 116 aa8.01□□□□□ -1.13
PDXDC1-214ENST00000566633 NMUP48645 174 aa8.01□□□□□ -1.13
PDXDC1-214ENST00000566633 UBE2V1Q13404 147 aa8.01□□□□□ -1.13
PDXDC1-214ENST00000566633 AP1S3Q96PC3 154 aa8.01□□□□□ -1.13
PDXDC1-214ENST00000566633 ODF3Q96PU9 254 aa8.01□□□□□ -1.13
PDXDC1-214ENST00000566633 MUC4Q99102 2169 aa8.01□□□□□ -1.13
PDXDC1-214ENST00000566633 TRAV12-3A0A0B4J271 114 aa8.01□□□□□ -1.13
PDXDC1-214ENST00000566633 A0A0J9YX75 114 aa8.01□□□□□ -1.13
PDXDC1-214ENST00000566633 DPM2O94777 84 aa8.01□□□□□ -1.13
PDXDC1-214ENST00000566633 NDUFA7O95182 113 aa8.01□□□□□ -1.13
PDXDC1-214ENST00000566633 LINC00315P59091 139 aa8.01□□□□□ -1.13
PDXDC1-214ENST00000566633 SNRPD3P62318 126 aaKnown RBP8.01□□□□□ -1.13
PDXDC1-214ENST00000566633 ATRQ13535 2644 aa8.01□□□□□ -1.13
PDXDC1-214ENST00000566633 IGKV2D-26A0A0A0MRZ7 120 aa8□□□□□ -1.13
PDXDC1-214ENST00000566633 ADARB2-AS1A8MUL3 147 aa8□□□□□ -1.13
PDXDC1-214ENST00000566633 K7EMI3 77 aa8□□□□□ -1.13
PDXDC1-214ENST00000566633 MGPP08493 103 aa8□□□□□ -1.13
PDXDC1-214ENST00000566633 PTTG1IPP53801 180 aa8□□□□□ -1.13
PDXDC1-214ENST00000566633 ORMDL2Q53FV1 153 aa8□□□□□ -1.13
PDXDC1-214ENST00000566633 TMEM61Q8N0U2 210 aa8□□□□□ -1.13
PDXDC1-214ENST00000566633 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8□□□□□ -1.13
PDXDC1-214ENST00000566633 CLUHP3Q96NS8 147 aa8□□□□□ -1.13
PDXDC1-214ENST00000566633 C7orf71A4D174 169 aa8□□□□□ -1.13
PDXDC1-214ENST00000566633 MRPL35Q9NZE8 188 aaKnown RBP8□□□□□ -1.13
PDXDC1-214ENST00000566633 PEMTQ9UBM1 199 aa8□□□□□ -1.13
PDXDC1-214ENST00000566633 NOTCH3Q9UM47 2321 aa8□□□□□ -1.13
PDXDC1-214ENST00000566633 A0A087WX48 190 aa7.99□□□□□ -1.13
PDXDC1-214ENST00000566633 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.99□□□□□ -1.13
PDXDC1-214ENST00000566633 PPP1R17O96001 155 aa7.99□□□□□ -1.13
PDXDC1-214ENST00000566633 CD7P09564 240 aa7.99□□□□□ -1.13
PDXDC1-214ENST00000566633 SEC11AP67812 179 aa7.99□□□□□ -1.13
PDXDC1-214ENST00000566633 CD300EQ496F6 205 aaPredicted RBP7.99□□□□□ -1.13
PDXDC1-214ENST00000566633 TOMM6Q96B49 74 aa7.99□□□□□ -1.13
PDXDC1-214ENST00000566633 FHL3Q13643 280 aa7.99□□□□□ -1.13
PDXDC1-214ENST00000566633 DYNLRB2Q8TF09 96 aa7.99□□□□□ -1.13
PDXDC1-214ENST00000566633 CBY3A6NI87 242 aa7.98□□□□□ -1.13
PDXDC1-214ENST00000566633 RBX1P62877 108 aa7.98□□□□□ -1.13
PDXDC1-214ENST00000566633 ZC2HC1BQ5TFG8 222 aa7.98□□□□□ -1.13
PDXDC1-214ENST00000566633 GTSCR1Q86UQ5 136 aa7.98□□□□□ -1.13
PDXDC1-214ENST00000566633 JPT2Q9H910 190 aa7.98□□□□□ -1.13
PDXDC1-214ENST00000566633 TRAV12-2A0A075B6T6 113 aa7.98□□□□□ -1.13
PDXDC1-214ENST00000566633 TRAV12-1A0A0B4J245 112 aa7.98□□□□□ -1.13
PDXDC1-214ENST00000566633 HSD52Q0P140 79 aa7.98□□□□□ -1.13
PDXDC1-214ENST00000566633 ERASQ7Z444 233 aa7.98□□□□□ -1.13
PDXDC1-214ENST00000566633 SCGB3A1Q96QR1 104 aa7.98□□□□□ -1.13
PDXDC1-214ENST00000566633 VWFP04275 2813 aa7.98□□□□□ -1.13
PDXDC1-214ENST00000566633 AGRNO00468 2067 aa7.97□□□□□ -1.13
PDXDC1-214ENST00000566633 IGHV3-16A0A0C4DH30 117 aa7.97□□□□□ -1.13
PDXDC1-214ENST00000566633 VAMP3Q15836 100 aa7.97□□□□□ -1.13
PDXDC1-214ENST00000566633 DEFB114Q30KQ6 69 aa7.97□□□□□ -1.13
PDXDC1-214ENST00000566633 CSTL1Q9H114 145 aa7.97□□□□□ -1.13
PDXDC1-214ENST00000566633 CDKN1BP46527 198 aa7.97□□□□□ -1.13
PDXDC1-214ENST00000566633 SPATA3Q8NHX4 192 aa7.97□□□□□ -1.13
PDXDC1-214ENST00000566633 C9orf85Q96MD7 179 aa7.97□□□□□ -1.13
PDXDC1-214ENST00000566633 TTTY13Q9BZ97 58 aa7.97□□□□□ -1.13
PDXDC1-214ENST00000566633 MDFICQ9P1T7 246 aa7.97□□□□□ -1.13
PDXDC1-214ENST00000566633 H7C1H1 209 aa7.96□□□□□ -1.13
PDXDC1-214ENST00000566633 PLNP26678 52 aa7.96□□□□□ -1.13
PDXDC1-214ENST00000566633 DEFB131AP59861 70 aa7.96□□□□□ -1.13
PDXDC1-214ENST00000566633 RPL32P62910 135 aaKnown RBP7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms