RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 C8orf49Q96NF6 230 aa7.47□□□□□ -1.21
CAPN3-215ENST00000565559 TP53TG3Q9ULZ0 132 aa7.47□□□□□ -1.21
CAPN3-215ENST00000565559 GCGP01275 180 aa7.46□□□□□ -1.22
CAPN3-215ENST00000565559 LTAP01374 205 aa7.46□□□□□ -1.22
CAPN3-215ENST00000565559 PFN1P07737 140 aaKnown RBP7.46□□□□□ -1.22
CAPN3-215ENST00000565559 BCL2P10415 239 aa7.46□□□□□ -1.22
CAPN3-215ENST00000565559 ZNF80P51504 273 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-215ENST00000565559 TCL1AP56279 114 aa7.46□□□□□ -1.22
CAPN3-215ENST00000565559 MEF2BQ02080 365 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-215ENST00000565559 Q6ZSA8 131 aa7.46□□□□□ -1.22
CAPN3-215ENST00000565559 LINC00612Q8N6U2 182 aa7.46□□□□□ -1.22
CAPN3-215ENST00000565559 VAX2Q9UIW0 290 aa7.46□□□□□ -1.22
CAPN3-215ENST00000565559 TRGV11A0A075B6L2 103 aa7.45□□□□□ -1.22
CAPN3-215ENST00000565559 FABP5P3A8MUU1 101 aa7.45□□□□□ -1.22
CAPN3-215ENST00000565559 PDE6DO43924 150 aa7.45□□□□□ -1.22
CAPN3-215ENST00000565559 KRTAP10-4P60372 401 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-215ENST00000565559 MUC21Q5SSG8 566 aa7.45□□□□□ -1.22
CAPN3-215ENST00000565559 TEX261Q6UWH6 196 aa7.45□□□□□ -1.22
CAPN3-215ENST00000565559 TMEM183AQ8IXX5 376 aa7.45□□□□□ -1.22
CAPN3-215ENST00000565559 VSIG2Q96IQ7 327 aa7.45□□□□□ -1.22
CAPN3-215ENST00000565559 GSN-AS1Q9NRJ2 163 aa7.45□□□□□ -1.22
CAPN3-215ENST00000565559 ICOSQ9Y6W8 199 aa7.45□□□□□ -1.22
CAPN3-215ENST00000565559 LRCOL1A6NCL2 159 aa7.44□□□□□ -1.22
CAPN3-215ENST00000565559 ZNF415Q09FC8 603 aa7.44□□□□□ -1.22
CAPN3-215ENST00000565559 C10orf126Q8N4M7 172 aa7.44□□□□□ -1.22
CAPN3-215ENST00000565559 SPXQ9BT56 116 aa7.44□□□□□ -1.22
CAPN3-215ENST00000565559 SDF2L1Q9HCN8 221 aa7.44□□□□□ -1.22
CAPN3-215ENST00000565559 C11orf21Q9P2W6 132 aa7.44□□□□□ -1.22
CAPN3-215ENST00000565559 TMA7Q9Y2S6 64 aaKnown RBP7.44□□□□□ -1.22
CAPN3-215ENST00000565559 RBFOX3A6NFN3 312 aa7.43□□□□□ -1.22
CAPN3-215ENST00000565559 GNRH2O43555 120 aa7.43□□□□□ -1.22
CAPN3-215ENST00000565559 SPINK4O60575 86 aa7.43□□□□□ -1.22
CAPN3-215ENST00000565559 NDUFS6O75380 124 aaKnown RBP7.43□□□□□ -1.22
CAPN3-215ENST00000565559 SCXQ7RTU7 201 aa7.43□□□□□ -1.22
CAPN3-215ENST00000565559 BAGE2Q86Y30 109 aa7.43□□□□□ -1.22
CAPN3-215ENST00000565559 ZC2HC1AQ96GY0 325 aa7.43□□□□□ -1.22
CAPN3-215ENST00000565559 MLST8Q9BVC4 326 aa7.43□□□□□ -1.22
CAPN3-215ENST00000565559 NAGKQ9UJ70 344 aa7.43□□□□□ -1.22
CAPN3-215ENST00000565559 TRGV2A0A075B6R0 118 aa7.42□□□□□ -1.22
CAPN3-215ENST00000565559 IGHV3-16A0A0C4DH30 117 aa7.42□□□□□ -1.22
CAPN3-215ENST00000565559 TYMSP04818 313 aa7.42□□□□□ -1.22
CAPN3-215ENST00000565559 RPL35P42766 123 aaKnown RBP7.42□□□□□ -1.22
CAPN3-215ENST00000565559 CRIP1P50238 77 aa7.42□□□□□ -1.22
CAPN3-215ENST00000565559 ZNF674Q2M3X9 581 aa7.42□□□□□ -1.22
CAPN3-215ENST00000565559 ZNF506Q5JVG8 444 aa7.42□□□□□ -1.22
CAPN3-215ENST00000565559 FAM162BQ5T6X4 162 aa7.42□□□□□ -1.22
CAPN3-215ENST00000565559 LYPD5Q6UWN5 251 aa7.42□□□□□ -1.22
CAPN3-215ENST00000565559 Q6ZTI0 123 aa7.42□□□□□ -1.22
CAPN3-215ENST00000565559 SMIM12Q96EX1 92 aa7.42□□□□□ -1.22
CAPN3-215ENST00000565559 MED9Q9NWA0 146 aa7.42□□□□□ -1.22
CAPN3-215ENST00000565559 TRGV1A0A0A0MS02 117 aa7.41□□□□□ -1.22
CAPN3-215ENST00000565559 TMEM250H0YL14 139 aa7.41□□□□□ -1.22
CAPN3-215ENST00000565559 SH2D1AO60880 128 aa7.41□□□□□ -1.22
CAPN3-215ENST00000565559 CRYGDP07320 174 aa7.41□□□□□ -1.22
CAPN3-215ENST00000565559 DNLZQ5SXM8 178 aa7.41□□□□□ -1.22
CAPN3-215ENST00000565559 RASL10AQ92737 203 aa7.41□□□□□ -1.22
CAPN3-215ENST00000565559 DERL1Q9BUN8 251 aa7.41□□□□□ -1.22
CAPN3-215ENST00000565559 KRTAP4-9Q9BYQ8 210 aa7.41□□□□□ -1.22
CAPN3-215ENST00000565559 IGKV3D-20A0A0C4DH25 116 aa7.4□□□□□ -1.22
CAPN3-215ENST00000565559 ORM1P02763 201 aa7.4□□□□□ -1.22
CAPN3-215ENST00000565559 PTH2Q96A98 100 aa7.4□□□□□ -1.22
CAPN3-215ENST00000565559 FAM210AQ96ND0 272 aa7.4□□□□□ -1.22
CAPN3-215ENST00000565559 KRTAP3-1Q9BYR8 98 aa7.4□□□□□ -1.22
CAPN3-215ENST00000565559 RAB19A4D1S5 217 aa7.39□□□□□ -1.23
CAPN3-215ENST00000565559 KRBOX1C9JBD0 128 aa7.39□□□□□ -1.23
CAPN3-215ENST00000565559 M0R2P5 195 aa7.39□□□□□ -1.23
CAPN3-215ENST00000565559 GAS8-AS1O95177 125 aa7.39□□□□□ -1.23
CAPN3-215ENST00000565559 MT1HL1P0DM35 61 aa7.39□□□□□ -1.23
CAPN3-215ENST00000565559 GNG4P50150 75 aa7.39□□□□□ -1.23
CAPN3-215ENST00000565559 MRPL23Q16540 153 aaKnown RBP7.39□□□□□ -1.23
CAPN3-215ENST00000565559 CENPWQ5EE01 88 aa7.39□□□□□ -1.23
CAPN3-215ENST00000565559 TOR2AQ5JU69 321 aa7.39□□□□□ -1.23
CAPN3-215ENST00000565559 NEGR1Q7Z3B1 354 aa7.39□□□□□ -1.23
CAPN3-215ENST00000565559 WFDC10BQ8IUB3 73 aa7.39□□□□□ -1.23
CAPN3-215ENST00000565559 NHLRC2Q8NBF2 726 aa7.39□□□□□ -1.23
CAPN3-215ENST00000565559 C9orf85Q96MD7 179 aa7.39□□□□□ -1.23
CAPN3-215ENST00000565559 EIF5A2Q9GZV4 153 aaKnown RBP7.39□□□□□ -1.23
CAPN3-215ENST00000565559 MRPL16Q9NX20 251 aaKnown RBP7.39□□□□□ -1.23
CAPN3-215ENST00000565559 TRBV20OR9-2A0A075B6H5 130 aa7.38□□□□□ -1.23
CAPN3-215ENST00000565559 B4DEV8 164 aa7.38□□□□□ -1.23
CAPN3-215ENST00000565559 C9JCJ5 164 aa7.38□□□□□ -1.23
CAPN3-215ENST00000565559 IGLV2-8P01709 118 aa7.38□□□□□ -1.23
CAPN3-215ENST00000565559 RNASE3P12724 160 aaKnown RBP7.38□□□□□ -1.23
CAPN3-215ENST00000565559 RPL37AP61513 92 aaKnown RBP7.38□□□□□ -1.23
CAPN3-215ENST00000565559 CHAC1Q9BUX1 264 aa7.38□□□□□ -1.23
CAPN3-215ENST00000565559 KRTAP9-3Q9BYQ3 159 aa7.38□□□□□ -1.23
CAPN3-215ENST00000565559 BIN3Q9NQY0 253 aa7.38□□□□□ -1.23
CAPN3-215ENST00000565559 IL36BQ9NZH7 164 aa7.38□□□□□ -1.23
CAPN3-215ENST00000565559 CXCL1P09341 107 aa7.37□□□□□ -1.23
CAPN3-215ENST00000565559 S100A4P26447 101 aaKnown RBP7.37□□□□□ -1.23
CAPN3-215ENST00000565559 PIK3CD-AS1Q5SR53 167 aa7.37□□□□□ -1.23
CAPN3-215ENST00000565559 PARLQ9H300 379 aa7.37□□□□□ -1.23
CAPN3-215ENST00000565559 SMDT1Q9H4I9 107 aa7.37□□□□□ -1.23
CAPN3-215ENST00000565559 TNXBP22105 4242 aa7.37□□□□□ -1.23
CAPN3-215ENST00000565559 M0R036 132 aa7.36□□□□□ -1.23
CAPN3-215ENST00000565559 CIDEAO60543 219 aa7.36□□□□□ -1.23
CAPN3-215ENST00000565559 SRP19P09132 144 aaKnown RBP7.36□□□□□ -1.23
CAPN3-215ENST00000565559 RAB14P61106 215 aa7.36□□□□□ -1.23
CAPN3-215ENST00000565559 SLAQ13239 276 aa7.36□□□□□ -1.23
CAPN3-215ENST00000565559 ZNF876PQ49A33 203 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms