RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 CTTNBP2Q8WZ74 1663 aa0.4□□□□□ -2.35
CHD9-211ENST00000564600 DSPPQ9NZW4 1301 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 PIEZO1Q92508 2521 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 TANC2Q9HCD6 1990 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 PTPRGP23470 1445 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 USP9XQ93008 2570 aaPredicted RBP0.39□□□□□ -2.35
CHD9-211ENST00000564600 FAM24AA6NFZ4 105 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 F6UZH7 168 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 APOC3P02656 99 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 HIST1H1DP16402 221 aaKnown RBP0.39□□□□□ -2.35
CHD9-211ENST00000564600 FGF7P21781 194 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 CBLN1P23435 193 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 KRTDAPP60985 99 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 RPS25P62851 125 aaKnown RBP0.39□□□□□ -2.35
CHD9-211ENST00000564600 KLKP1Q107X0 134 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 IQCJQ1A5X6 159 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 Q56UQ5 140 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 RPL13AP3Q6NVV1 102 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 HRCT1Q6UXD1 115 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 ZCCHC23Q6ZST2 131 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 Q86TA4 180 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 SVBPQ8N300 66 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 SMIM4Q8WVI0 70 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 FAM107BQ9H098 131 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 C10orf95Q9H7T3 257 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 ASH1LQ9NR48 2969 aaKnown RBP0.39□□□□□ -2.35
CHD9-211ENST00000564600 TMEM14BQ9NUH8 114 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 TMEM242Q9NWH2 141 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 FKBP11Q9NYL4 201 aa0.39□□□□□ -2.35
CHD9-211ENST00000564600 SETXQ7Z333 2677 aaKnown RBP0.39□□□□□ -2.35
CHD9-211ENST00000564600 DAPK1P53355 1430 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 FASNP49327 2511 aaKnown RBP0.38□□□□□ -2.35
CHD9-211ENST00000564600 RIF1Q5UIP0 2472 aaKnown RBP0.38□□□□□ -2.35
CHD9-211ENST00000564600 CCDC168Q8NDH2 2452 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 NINQ8N4C6 2090 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 ZFC3H1O60293 1989 aaKnown RBP0.38□□□□□ -2.35
CHD9-211ENST00000564600 TMEM2Q9UHN6 1383 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 TRBV7-1A0A0A6YYK4 115 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 A0A1B0GW64 132 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 NUPR2A6NF83 97 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 SSSCA1O60232 199 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 IGKCP01834 107 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 MT-ND4LP03901 98 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 PIRTP0C851 137 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 IGLC6P0CF74 106 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 AKAIN1P0CW23 69 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 SPINT3P49223 89 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 ZNF137PP52743 207 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 SPINK7P58062 85 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 TPPP2P59282 170 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 RPL37AP61513 92 aaKnown RBP0.38□□□□□ -2.35
CHD9-211ENST00000564600 UBE2G1P62253 170 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 EMX2Q04743 252 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 C9orf116Q5BN46 136 aaPredicted RBP0.38□□□□□ -2.35
CHD9-211ENST00000564600 MIC13Q5XKP0 118 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 ZNF818PQ6ZRF7 136 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 GTF2H5Q6ZYL4 71 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 BAGE3Q86Y29 109 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 TSKUQ8WUA8 353 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 PLAC4Q8WY50 150 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 VAMP8Q9BV40 100 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 SEC11CQ9BY50 192 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 BPESC1Q9GZL8 116 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 FAIMQ9NVQ4 179 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 UQCR10Q9UDW1 63 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 GNG8Q9UK08 70 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 AP4S1Q9Y587 144 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 DNAJC15Q9Y5T4 150 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 KDM6BO15054 1643 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 FGD6Q6ZV73 1430 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 SSPOA2VEC9 5147 aa0.38□□□□□ -2.35
CHD9-211ENST00000564600 LRRK2Q5S007 2527 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 ERCC6Q03468 1493 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 STAB2Q8WWQ8 2551 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 ACACBO00763 2458 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 KTN1Q86UP2 1357 aaKnown RBP0.37□□□□□ -2.35
CHD9-211ENST00000564600 TRBV10-3A0A0K0K1G6 114 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 CXorf51AA0A1B0GTR3 108 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 ARPC5O15511 151 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 SNAPC5O75971 98 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 CD3DP04234 171 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 CD14P08571 375 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 SLC25A6P12236 298 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 ATP5EP56381 51 aaPredicted RBP0.37□□□□□ -2.35
CHD9-211ENST00000564600 EDDM3BP56851 147 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 SMIM11AP58511 58 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 ELOF1P60002 83 aaKnown RBP0.37□□□□□ -2.35
CHD9-211ENST00000564600 UBE2L3P68036 154 aaKnown RBP0.37□□□□□ -2.35
CHD9-211ENST00000564600 CCL8P80075 99 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 DCDP81605 110 aaKnown RBP0.37□□□□□ -2.35
CHD9-211ENST00000564600 COX6A2Q02221 97 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 COX17Q14061 63 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 TMEM170BQ5T4T1 132 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 SPATA8Q6RVD6 105 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 FAM213BQ8TBF2 198 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 SMIM11BQ8TCY0 68 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 CCL19Q99731 98 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 TCEAL7Q9BRU2 100 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 SNRNP25Q9BV90 132 aaKnown RBP0.37□□□□□ -2.35
CHD9-211ENST00000564600 CYP4F30PQ9H0H9 118 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms