RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 A0A1W2PPQ1 181 aa12.64□□□□□ -0.39
PKD1-227ENST00000564313 F2Z2F3 143 aa12.64□□□□□ -0.39
PKD1-227ENST00000564313 IGLC6P0CF74 106 aa12.64□□□□□ -0.39
PKD1-227ENST00000564313 UFSP1Q6NVU6 142 aa12.64□□□□□ -0.39
PKD1-227ENST00000564313 FAM231DQ6ZW35 169 aa12.64□□□□□ -0.39
PKD1-227ENST00000564313 OR10AG1Q8NH19 301 aa12.64□□□□□ -0.39
PKD1-227ENST00000564313 ZNRF2Q8NHG8 242 aa12.64□□□□□ -0.39
PKD1-227ENST00000564313 RPP21Q9H633 154 aaKnown RBP12.64□□□□□ -0.39
PKD1-227ENST00000564313 CACNG7P62955 275 aa12.63□□□□□ -0.39
PKD1-227ENST00000564313 JPT2Q9H910 190 aa12.63□□□□□ -0.39
PKD1-227ENST00000564313 FAM74A4Q5TZK3 123 aa12.62□□□□□ -0.39
PKD1-227ENST00000564313 SAMD10Q9BYL1 202 aa12.62□□□□□ -0.39
PKD1-227ENST00000564313 RNASE7Q9H1E1 156 aaKnown RBP12.62□□□□□ -0.39
PKD1-227ENST00000564313 CRYGDP07320 174 aa12.61□□□□□ -0.39
PKD1-227ENST00000564313 LINC01551Q86U37 167 aa12.61□□□□□ -0.39
PKD1-227ENST00000564313 AP1S3Q96PC3 154 aa12.61□□□□□ -0.39
PKD1-227ENST00000564313 TPPP3Q9BW30 176 aa12.61□□□□□ -0.39
PKD1-227ENST00000564313 A0A087WWL8 130 aa12.6□□□□□ -0.39
PKD1-227ENST00000564313 GATCO43716 136 aaKnown RBP12.6□□□□□ -0.39
PKD1-227ENST00000564313 GZMBP10144 247 aa12.6□□□□□ -0.39
PKD1-227ENST00000564313 TIRAPP58753 221 aa12.6□□□□□ -0.39
PKD1-227ENST00000564313 ERVFC1-1P60608 527 aa12.6□□□□□ -0.39
PKD1-227ENST00000564313 CT83Q5H943 113 aa12.6□□□□□ -0.39
PKD1-227ENST00000564313 LYPD5Q6UWN5 251 aa12.6□□□□□ -0.39
PKD1-227ENST00000564313 Q9H8V8 135 aa12.6□□□□□ -0.39
PKD1-227ENST00000564313 IGLV2-18A0A075B6J9 118 aa12.59□□□□□ -0.39
PKD1-227ENST00000564313 LOC100131303A0A0U1RQF7 123 aa12.59□□□□□ -0.39
PKD1-227ENST00000564313 SMIM17P0DL12 118 aa12.59□□□□□ -0.39
PKD1-227ENST00000564313 TMEM241Q24JQ0 296 aa12.59□□□□□ -0.39
PKD1-227ENST00000564313 TTC32Q5I0X7 151 aa12.59□□□□□ -0.39
PKD1-227ENST00000564313 WDR73Q6P4I2 378 aa12.59□□□□□ -0.39
PKD1-227ENST00000564313 Q6ZR54 194 aa12.59□□□□□ -0.39
PKD1-227ENST00000564313 PKHD1P08F94 4074 aa12.58□□□□□ -0.4
PKD1-227ENST00000564313 A8MWL6 223 aa12.58□□□□□ -0.4
PKD1-227ENST00000564313 CTRLP40313 264 aa12.58□□□□□ -0.4
PKD1-227ENST00000564313 RAB4BP61018 213 aa12.58□□□□□ -0.4
PKD1-227ENST00000564313 CLLU1Q5K131 121 aa12.58□□□□□ -0.4
PKD1-227ENST00000564313 NAT8Q9UHE5 227 aa12.58□□□□□ -0.4
PKD1-227ENST00000564313 DYNC1H1Q14204 4646 aaKnown RBP12.58□□□□□ -0.4
PKD1-227ENST00000564313 MUC21A0A0G2JKD1 596 aa12.57□□□□□ -0.4
PKD1-227ENST00000564313 TRBV10-1A0A0K0K1A3 114 aa12.57□□□□□ -0.4
PKD1-227ENST00000564313 NBDYA0A0U1RRE5 68 aa12.57□□□□□ -0.4
PKD1-227ENST00000564313 MUC21A0A140T8X8 626 aa12.57□□□□□ -0.4
PKD1-227ENST00000564313 TRGC1P0CF51 173 aa12.57□□□□□ -0.4
PKD1-227ENST00000564313 SRSF3P84103 164 aaKnown RBP12.57□□□□□ -0.4
PKD1-227ENST00000564313 SOHLH1Q5JUK2 328 aa12.57□□□□□ -0.4
PKD1-227ENST00000564313 LYZL1Q6UWQ5 148 aa12.57□□□□□ -0.4
PKD1-227ENST00000564313 Q6ZSN1 163 aa12.57□□□□□ -0.4
PKD1-227ENST00000564313 C15orf54Q8N8G6 183 aa12.57□□□□□ -0.4
PKD1-227ENST00000564313 OSTCQ9NRP0 149 aa12.57□□□□□ -0.4
PKD1-227ENST00000564313 C9JQL5 133 aa12.56□□□□□ -0.4
PKD1-227ENST00000564313 M0R2N4 97 aa12.56□□□□□ -0.4
PKD1-227ENST00000564313 SIVA1O15304 175 aa12.56□□□□□ -0.4
PKD1-227ENST00000564313 ZNF56Q15929 161 aa12.56□□□□□ -0.4
PKD1-227ENST00000564313 ATP6V0E2Q8NHE4 81 aa12.56□□□□□ -0.4
PKD1-227ENST00000564313 CNFNQ9BYD5 112 aa12.56□□□□□ -0.4
PKD1-227ENST00000564313 FAT2Q9NYQ8 4349 aa12.55□□□□□ -0.4
PKD1-227ENST00000564313 LINC00694P0DN24 101 aa12.55□□□□□ -0.4
PKD1-227ENST00000564313 C14orf178Q8N769 122 aaPredicted RBP12.55□□□□□ -0.4
PKD1-227ENST00000564313 FAM231BA6NCW3 169 aa12.54□□□□□ -0.4
PKD1-227ENST00000564313 SSTP61278 116 aa12.54□□□□□ -0.4
PKD1-227ENST00000564313 RPL23P62829 140 aaKnown RBP12.54□□□□□ -0.4
PKD1-227ENST00000564313 ISOC2Q96AB3 205 aa12.54□□□□□ -0.4
PKD1-227ENST00000564313 GFRA4Q9GZZ7 299 aa12.54□□□□□ -0.4
PKD1-227ENST00000564313 GTSF1LQ9H1H1 148 aa12.54□□□□□ -0.4
PKD1-227ENST00000564313 DNAH2Q9P225 4427 aa12.54□□□□□ -0.4
PKD1-227ENST00000564313 GAGE12JA6NER3 117 aa12.53□□□□□ -0.4
PKD1-227ENST00000564313 K7EP13 123 aa12.53□□□□□ -0.4
PKD1-227ENST00000564313 BTF3P20290 206 aaKnown RBP12.53□□□□□ -0.4
PKD1-227ENST00000564313 NTF3P20783 257 aa12.53□□□□□ -0.4
PKD1-227ENST00000564313 FOXA3P55318 350 aaPredicted RBP12.53□□□□□ -0.4
PKD1-227ENST00000564313 RPL36AP83881 106 aaKnown RBP12.53□□□□□ -0.4
PKD1-227ENST00000564313 IFITM2Q01629 132 aa12.53□□□□□ -0.4
PKD1-227ENST00000564313 GAGE1Q13065 139 aa12.53□□□□□ -0.4
PKD1-227ENST00000564313 GAGE4Q13068 117 aa12.53□□□□□ -0.4
PKD1-227ENST00000564313 GAGE5Q13069 117 aa12.53□□□□□ -0.4
PKD1-227ENST00000564313 ADIRFQ15847 76 aa12.53□□□□□ -0.4
PKD1-227ENST00000564313 GAGE13Q4V321 117 aa12.53□□□□□ -0.4
PKD1-227ENST00000564313 LINC00336Q6ZUF6 198 aa12.53□□□□□ -0.4
PKD1-227ENST00000564313 TSKUQ8WUA8 353 aa12.53□□□□□ -0.4
PKD1-227ENST00000564313 RPL36ALQ969Q0 106 aaKnown RBP12.53□□□□□ -0.4
PKD1-227ENST00000564313 KIF25-AS1Q9Y6Z4 181 aa12.53□□□□□ -0.4
PKD1-227ENST00000564313 TRAV8-6A0A0B4J262 113 aa12.52□□□□□ -0.41
PKD1-227ENST00000564313 F5H697 171 aa12.52□□□□□ -0.41
PKD1-227ENST00000564313 C1orf134Q5TEV5 83 aa12.52□□□□□ -0.41
PKD1-227ENST00000564313 OR10G8Q8NGN5 311 aa12.52□□□□□ -0.41
PKD1-227ENST00000564313 GTSF1Q8WW33 167 aa12.52□□□□□ -0.41
PKD1-227ENST00000564313 BORCS7Q96B45 105 aa12.52□□□□□ -0.41
PKD1-227ENST00000564313 H7C1H1 209 aa12.51□□□□□ -0.41
PKD1-227ENST00000564313 TWIST1Q15672 202 aa12.51□□□□□ -0.41
PKD1-227ENST00000564313 LELP1Q5T871 98 aa12.51□□□□□ -0.41
PKD1-227ENST00000564313 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.51□□□□□ -0.41
PKD1-227ENST00000564313 DPH3P1Q9H4G8 78 aa12.51□□□□□ -0.41
PKD1-227ENST00000564313 MSRB1Q9NZV6 116 aa12.51□□□□□ -0.41
PKD1-227ENST00000564313 DNAH11Q96DT5 4516 aa12.5□□□□□ -0.41
PKD1-227ENST00000564313 TRBV7-3A0A075B6L6 115 aa12.5□□□□□ -0.41
PKD1-227ENST00000564313 TRAV9-2A0A087WT02 112 aa12.5□□□□□ -0.41
PKD1-227ENST00000564313 A0A087WWC5 75 aa12.5□□□□□ -0.41
PKD1-227ENST00000564313 SMIM15Q7Z3B0 74 aa12.5□□□□□ -0.41
PKD1-227ENST00000564313 MGPP08493 103 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms