RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 KHDC1LQ5JSQ8 128 aa13.4□□□□□ -0.26
GDE1-203ENST00000564172 NFE4Q86UQ8 179 aa13.4□□□□□ -0.26
GDE1-203ENST00000564172 C4orf3Q8WVX3 66 aa13.4□□□□□ -0.26
GDE1-203ENST00000564172 IGHV7-4-1A0A0J9YVY3 117 aa13.39□□□□□ -0.27
GDE1-203ENST00000564172 HIGD1CA8MV81 97 aa13.39□□□□□ -0.27
GDE1-203ENST00000564172 HOXD3P31249 432 aaPredicted RBP13.39□□□□□ -0.27
GDE1-203ENST00000564172 PRR31Q5SQ13 230 aa13.39□□□□□ -0.27
GDE1-203ENST00000564172 HIST2H2BDQ6DRA6 164 aa13.39□□□□□ -0.27
GDE1-203ENST00000564172 DAZAP1Q96EP5 407 aaKnown RBP13.39□□□□□ -0.27
GDE1-203ENST00000564172 AAMDCQ9H7C9 122 aa13.39□□□□□ -0.27
GDE1-203ENST00000564172 DEFB136Q30KP8 78 aa13.39□□□□□ -0.27
GDE1-203ENST00000564172 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.39□□□□□ -0.27
GDE1-203ENST00000564172 NHP2Q9NX24 153 aaKnown RBP13.39□□□□□ -0.27
GDE1-203ENST00000564172 CYSRT1A8MQ03 144 aa13.38□□□□□ -0.27
GDE1-203ENST00000564172 M0R3E3 92 aa13.38□□□□□ -0.27
GDE1-203ENST00000564172 NCR2O95944 276 aa13.38□□□□□ -0.27
GDE1-203ENST00000564172 ZNF688P0C7X2 276 aa13.38□□□□□ -0.27
GDE1-203ENST00000564172 FOXA3P55318 350 aaPredicted RBP13.38□□□□□ -0.27
GDE1-203ENST00000564172 RRN3P1Q2M238 152 aa13.38□□□□□ -0.27
GDE1-203ENST00000564172 C11orf44Q8N8P7 122 aa13.38□□□□□ -0.27
GDE1-203ENST00000564172 RHPN1-AS1Q9BWJ2 59 aa13.38□□□□□ -0.27
GDE1-203ENST00000564172 KLF12Q9Y4X4 402 aa13.38□□□□□ -0.27
GDE1-203ENST00000564172 SETXQ7Z333 2677 aaKnown RBP13.38□□□□□ -0.27
GDE1-203ENST00000564172 HAX1O00165 279 aa13.37□□□□□ -0.27
GDE1-203ENST00000564172 SYNJ2BPP57105 145 aa13.37□□□□□ -0.27
GDE1-203ENST00000564172 AP5S1Q9NUS5 200 aa13.37□□□□□ -0.27
GDE1-203ENST00000564172 SETD2Q9BYW2 2564 aaPredicted RBP13.37□□□□□ -0.27
GDE1-203ENST00000564172 NPIPB6E9PJ23 425 aa13.37□□□□□ -0.27
GDE1-203ENST00000564172 K7ERJ3 54 aa13.37□□□□□ -0.27
GDE1-203ENST00000564172 LGALS9O00182 355 aa13.37□□□□□ -0.27
GDE1-203ENST00000564172 CD28P10747 220 aa13.37□□□□□ -0.27
GDE1-203ENST00000564172 EDN2P20800 178 aa13.37□□□□□ -0.27
GDE1-203ENST00000564172 ASIPP42127 132 aa13.37□□□□□ -0.27
GDE1-203ENST00000564172 SRSF2Q01130 221 aaKnown RBP13.37□□□□□ -0.27
GDE1-203ENST00000564172 KLHL30-AS1Q8NEE0 82 aa13.37□□□□□ -0.27
GDE1-203ENST00000564172 CHAC1Q9BUX1 264 aa13.37□□□□□ -0.27
GDE1-203ENST00000564172 CHEK1O14757 476 aa13.36□□□□□ -0.27
GDE1-203ENST00000564172 IGFL4Q6B9Z1 124 aa13.36□□□□□ -0.27
GDE1-203ENST00000564172 PCP2Q8IVA1 136 aa13.36□□□□□ -0.27
GDE1-203ENST00000564172 SGK494Q96LW2 274 aa13.36□□□□□ -0.27
GDE1-203ENST00000564172 LINC01619G3V211 115 aa13.36□□□□□ -0.27
GDE1-203ENST00000564172 HLA-DRB4P13762 266 aa13.36□□□□□ -0.27
GDE1-203ENST00000564172 C12orf74Q32Q52 190 aa13.36□□□□□ -0.27
GDE1-203ENST00000564172 MEIG1Q5JSS6 88 aa13.36□□□□□ -0.27
GDE1-203ENST00000564172 TEN1Q86WV5 123 aa13.36□□□□□ -0.27
GDE1-203ENST00000564172 MDFICQ9P1T7 246 aa13.36□□□□□ -0.27
GDE1-203ENST00000564172 HLA-DRB4X5D2U9 266 aa13.36□□□□□ -0.27
GDE1-203ENST00000564172 SMCPP49901 116 aaPredicted RBP13.35□□□□□ -0.27
GDE1-203ENST00000564172 GOLT1AQ6ZVE7 132 aa13.35□□□□□ -0.27
GDE1-203ENST00000564172 PRB4P10163 310 aaPredicted RBP13.35□□□□□ -0.27
GDE1-203ENST00000564172 HLA-DMBP28068 263 aa13.35□□□□□ -0.27
GDE1-203ENST00000564172 SLURP1P55000 103 aa13.35□□□□□ -0.27
GDE1-203ENST00000564172 PROK1P58294 105 aa13.35□□□□□ -0.27
GDE1-203ENST00000564172 CT83Q5H943 113 aa13.35□□□□□ -0.27
GDE1-203ENST00000564172 AMTNQ6UX39 209 aa13.35□□□□□ -0.27
GDE1-203ENST00000564172 SLC50A1Q9BRV3 221 aa13.35□□□□□ -0.27
GDE1-203ENST00000564172 FMC1Q96HJ9 113 aa13.34□□□□□ -0.27
GDE1-203ENST00000564172 CARD19Q96LW7 228 aa13.34□□□□□ -0.27
GDE1-203ENST00000564172 DUX3Q96PT4 197 aa13.34□□□□□ -0.27
GDE1-203ENST00000564172 TRAV8-1A0A0A6YYK1 113 aa13.33□□□□□ -0.27
GDE1-203ENST00000564172 IGLV2-11P01706 119 aa13.33□□□□□ -0.28
GDE1-203ENST00000564172 NMUP48645 174 aa13.33□□□□□ -0.28
GDE1-203ENST00000564172 ANXA2RQ3ZCQ2 193 aa13.33□□□□□ -0.28
GDE1-203ENST00000564172 FAM159AQ6UWV7 190 aa13.33□□□□□ -0.28
GDE1-203ENST00000564172 DLX4Q92988 240 aaPredicted RBP13.33□□□□□ -0.28
GDE1-203ENST00000564172 TRAV8-2A0A0B4J237 113 aa13.32□□□□□ -0.28
GDE1-203ENST00000564172 SNCGO76070 127 aa13.32□□□□□ -0.28
GDE1-203ENST00000564172 GFRA4Q9GZZ7 299 aa13.32□□□□□ -0.28
GDE1-203ENST00000564172 C2CD3Q4AC94 2353 aa13.32□□□□□ -0.28
GDE1-203ENST00000564172 RPL11P62913 178 aaKnown RBP13.32□□□□□ -0.28
GDE1-203ENST00000564172 RNF182Q8N6D2 247 aa13.32□□□□□ -0.28
GDE1-203ENST00000564172 SPANXCQ9NY87 97 aa13.32□□□□□ -0.28
GDE1-203ENST00000564172 TRBV20-1A0A075B6N2 111 aa13.31□□□□□ -0.28
GDE1-203ENST00000564172 A0A1W2PRX2 142 aa13.31□□□□□ -0.28
GDE1-203ENST00000564172 TMEM75Q8N9X5 138 aa13.31□□□□□ -0.28
GDE1-203ENST00000564172 RASL10AQ92737 203 aa13.31□□□□□ -0.28
GDE1-203ENST00000564172 LTAP01374 205 aa13.31□□□□□ -0.28
GDE1-203ENST00000564172 C16orf92Q96LL3 132 aa13.31□□□□□ -0.28
GDE1-203ENST00000564172 RBPMS2Q6ZRY4 209 aaKnown RBP13.3□□□□□ -0.28
GDE1-203ENST00000564172 SBSPONQ8IVN8 264 aa13.3□□□□□ -0.28
GDE1-203ENST00000564172 OR10J6PQ8NGY7 276 aa13.3□□□□□ -0.28
GDE1-203ENST00000564172 MLST8Q9BVC4 326 aa13.3□□□□□ -0.28
GDE1-203ENST00000564172 IGKV3-7A0A075B6H7 116 aa13.29□□□□□ -0.28
GDE1-203ENST00000564172 TRBV6-1A0A0K0K1D8 114 aa13.29□□□□□ -0.28
GDE1-203ENST00000564172 SOCS3O14543 225 aa13.29□□□□□ -0.28
GDE1-203ENST00000564172 PRNTQ86SH4 94 aa13.29□□□□□ -0.28
GDE1-203ENST00000564172 IGKV2-40A0A087WW87 121 aaPredicted RBP13.29□□□□□ -0.28
GDE1-203ENST00000564172 IGKV2D-40P01614 121 aaPredicted RBP13.29□□□□□ -0.28
GDE1-203ENST00000564172 ZNF138P52744 262 aa13.29□□□□□ -0.28
GDE1-203ENST00000564172 Q86TA4 180 aa13.29□□□□□ -0.28
GDE1-203ENST00000564172 KIR2DL4Q99706 377 aa13.29□□□□□ -0.28
GDE1-203ENST00000564172 TRBV25-1A0A075B6N4 114 aa13.28□□□□□ -0.28
GDE1-203ENST00000564172 CSN3P07498 182 aa13.28□□□□□ -0.28
GDE1-203ENST00000564172 TMEM158Q8WZ71 300 aa13.28□□□□□ -0.28
GDE1-203ENST00000564172 PRAC2D3DTV9 90 aa13.28□□□□□ -0.28
GDE1-203ENST00000564172 CCL24O00175 119 aa13.28□□□□□ -0.28
GDE1-203ENST00000564172 CACNG7P62955 275 aa13.28□□□□□ -0.28
GDE1-203ENST00000564172 MRPL53Q96EL3 112 aaKnown RBP13.28□□□□□ -0.28
GDE1-203ENST00000564172 OR8A1Q8NGG7 326 aa13.27□□□□□ -0.28
GDE1-203ENST00000564172 PEMTQ9UBM1 199 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms