RNA–Protein interactions for RNA: ENST00000563835.1

PTPN9-203, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-203ENST00000563835 Q9HAA7 133 aa6.2□□□□□ -1.42
PTPN9-203ENST00000563835 GNG13Q9P2W3 67 aa6.2□□□□□ -1.42
PTPN9-203ENST00000563835 TRAV8-6A0A0B4J262 113 aa6.19□□□□□ -1.42
PTPN9-203ENST00000563835 MUC21A0A0G2JKD1 596 aa6.19□□□□□ -1.42
PTPN9-203ENST00000563835 MUC21A0A140T8X8 626 aa6.19□□□□□ -1.42
PTPN9-203ENST00000563835 PIK3CD-AS1Q5SR53 167 aa6.19□□□□□ -1.42
PTPN9-203ENST00000563835 LELP1Q5T871 98 aa6.19□□□□□ -1.42
PTPN9-203ENST00000563835 PRR27Q6MZM9 219 aa6.19□□□□□ -1.42
PTPN9-203ENST00000563835 NFE4Q86UQ8 179 aa6.19□□□□□ -1.42
PTPN9-203ENST00000563835 SYT8Q8NBV8 401 aa6.19□□□□□ -1.42
PTPN9-203ENST00000563835 OR10AG1Q8NH19 301 aa6.19□□□□□ -1.42
PTPN9-203ENST00000563835 SFRP2Q96HF1 295 aa6.19□□□□□ -1.42
PTPN9-203ENST00000563835 MLST8Q9BVC4 326 aa6.19□□□□□ -1.42
PTPN9-203ENST00000563835 PHLDA3Q9Y5J5 127 aa6.19□□□□□ -1.42
PTPN9-203ENST00000563835 RHODO00212 210 aa6.18□□□□□ -1.42
PTPN9-203ENST00000563835 RPL35P42766 123 aaKnown RBP6.18□□□□□ -1.42
PTPN9-203ENST00000563835 EIF5AP63241 154 aaKnown RBP6.18□□□□□ -1.42
PTPN9-203ENST00000563835 BAGE2Q86Y30 109 aa6.18□□□□□ -1.42
PTPN9-203ENST00000563835 TCTE3Q8IZS6 198 aa6.18□□□□□ -1.42
PTPN9-203ENST00000563835 ZFP82Q8N141 532 aa6.18□□□□□ -1.42
PTPN9-203ENST00000563835 C10orf126Q8N4M7 172 aa6.18□□□□□ -1.42
PTPN9-203ENST00000563835 LRCOL1A6NCL2 159 aa6.17□□□□□ -1.42
PTPN9-203ENST00000563835 IBA57-AS1B1ANH7 110 aa6.17□□□□□ -1.42
PTPN9-203ENST00000563835 K7EP13 123 aa6.17□□□□□ -1.42
PTPN9-203ENST00000563835 CENPWQ5EE01 88 aa6.17□□□□□ -1.42
PTPN9-203ENST00000563835 C11orf52Q96A22 123 aa6.17□□□□□ -1.42
PTPN9-203ENST00000563835 MANBALQ9NQG1 85 aa6.17□□□□□ -1.42
PTPN9-203ENST00000563835 TRAV1-1A0A0B4J248 108 aa6.16□□□□□ -1.42
PTPN9-203ENST00000563835 EREGO14944 169 aa6.16□□□□□ -1.42
PTPN9-203ENST00000563835 SNAI2O43623 268 aa6.16□□□□□ -1.42
PTPN9-203ENST00000563835 PSCAO43653 123 aa6.16□□□□□ -1.42
PTPN9-203ENST00000563835 IGLV2-8P01709 118 aa6.16□□□□□ -1.42
PTPN9-203ENST00000563835 C1QBP02746 253 aa6.16□□□□□ -1.42
PTPN9-203ENST00000563835 S100A9P06702 114 aaKnown RBP6.16□□□□□ -1.42
PTPN9-203ENST00000563835 GZMBP10144 247 aa6.16□□□□□ -1.42
PTPN9-203ENST00000563835 SULT1A2P50226 295 aa6.16□□□□□ -1.42
PTPN9-203ENST00000563835 KRTAP10-1P60331 282 aa6.16□□□□□ -1.42
PTPN9-203ENST00000563835 SSTP61278 116 aa6.16□□□□□ -1.42
PTPN9-203ENST00000563835 WFDC2Q14508 124 aa6.16□□□□□ -1.42
PTPN9-203ENST00000563835 DAZ4Q86SG3 579 aaKnown RBP6.16□□□□□ -1.42
PTPN9-203ENST00000563835 DNAJC30Q96LL9 226 aa6.16□□□□□ -1.42
PTPN9-203ENST00000563835 DAZ3Q9NR90 486 aaKnown RBP6.16□□□□□ -1.42
PTPN9-203ENST00000563835 TRBV20OR9-2A0A075B6H5 130 aa6.15□□□□□ -1.42
PTPN9-203ENST00000563835 RAB19A4D1S5 217 aa6.15□□□□□ -1.42
PTPN9-203ENST00000563835 CXCL1P09341 107 aa6.15□□□□□ -1.42
PTPN9-203ENST00000563835 HAMPP81172 84 aa6.15□□□□□ -1.42
PTPN9-203ENST00000563835 ZNF56Q15929 161 aa6.15□□□□□ -1.42
PTPN9-203ENST00000563835 CDPF1Q6NVV7 123 aa6.15□□□□□ -1.42
PTPN9-203ENST00000563835 C9orf62Q8N4C0 152 aa6.15□□□□□ -1.42
PTPN9-203ENST00000563835 PGPEP1Q9NXJ5 209 aa6.15□□□□□ -1.42
PTPN9-203ENST00000563835 RBFOX3A6NFN3 312 aa6.14□□□□□ -1.43
PTPN9-203ENST00000563835 RAB5CP51148 216 aa6.14□□□□□ -1.43
PTPN9-203ENST00000563835 UBE2D3P61077 147 aa6.14□□□□□ -1.43
PTPN9-203ENST00000563835 UBE2D2P62837 147 aa6.14□□□□□ -1.43
PTPN9-203ENST00000563835 MEF2BQ02080 365 aaPredicted RBP6.14□□□□□ -1.43
PTPN9-203ENST00000563835 SLC51BQ86UW2 128 aa6.14□□□□□ -1.43
PTPN9-203ENST00000563835 Q8N1X5 172 aa6.14□□□□□ -1.43
PTPN9-203ENST00000563835 NEXN-AS1Q8NBZ9 246 aa6.14□□□□□ -1.43
PTPN9-203ENST00000563835 SSBP4Q9BWG4 385 aaPredicted RBP6.14□□□□□ -1.43
PTPN9-203ENST00000563835 LECT2O14960 151 aa6.13□□□□□ -1.43
PTPN9-203ENST00000563835 OR5AL1P0C617 328 aa6.13□□□□□ -1.43
PTPN9-203ENST00000563835 BCL2P10415 239 aa6.13□□□□□ -1.43
PTPN9-203ENST00000563835 XGP55808 180 aa6.13□□□□□ -1.43
PTPN9-203ENST00000563835 LAGE3Q14657 143 aa6.13□□□□□ -1.43
PTPN9-203ENST00000563835 SPANXN1Q5VSR9 72 aa6.13□□□□□ -1.43
PTPN9-203ENST00000563835 EIF5AL1Q6IS14 154 aaKnown RBP6.13□□□□□ -1.43
PTPN9-203ENST00000563835 AKAP14Q86UN6 197 aa6.13□□□□□ -1.43
PTPN9-203ENST00000563835 Q8N814 137 aa6.13□□□□□ -1.43
PTPN9-203ENST00000563835 TPPP3Q9BW30 176 aa6.13□□□□□ -1.43
PTPN9-203ENST00000563835 TRBV7-3A0A075B6L6 115 aa6.12□□□□□ -1.43
PTPN9-203ENST00000563835 A0A087WWC5 75 aa6.12□□□□□ -1.43
PTPN9-203ENST00000563835 IGLV5-52A0A0A0MRZ9 124 aa6.12□□□□□ -1.43
PTPN9-203ENST00000563835 TRBV10-1A0A0K0K1A3 114 aa6.12□□□□□ -1.43
PTPN9-203ENST00000563835 C19orf71A6NCJ1 209 aa6.12□□□□□ -1.43
PTPN9-203ENST00000563835 IGLC6P0CF74 106 aa6.12□□□□□ -1.43
PTPN9-203ENST00000563835 GNG4P50150 75 aa6.12□□□□□ -1.43
PTPN9-203ENST00000563835 RAB4BP61018 213 aa6.12□□□□□ -1.43
PTPN9-203ENST00000563835 RPL36AP83881 106 aaKnown RBP6.12□□□□□ -1.43
PTPN9-203ENST00000563835 ALKAL2Q6UX46 152 aa6.12□□□□□ -1.43
PTPN9-203ENST00000563835 NIT1Q86X76 327 aa6.12□□□□□ -1.43
PTPN9-203ENST00000563835 OR2D3Q8NGH3 330 aa6.12□□□□□ -1.43
PTPN9-203ENST00000563835 OR10G8Q8NGN5 311 aa6.12□□□□□ -1.43
PTPN9-203ENST00000563835 RPL36ALQ969Q0 106 aaKnown RBP6.12□□□□□ -1.43
PTPN9-203ENST00000563835 MED9Q9NWA0 146 aa6.12□□□□□ -1.43
PTPN9-203ENST00000563835 KIF25-AS1Q9Y6Z4 181 aa6.12□□□□□ -1.43
PTPN9-203ENST00000563835 FAT1Q14517 4588 aa6.11□□□□□ -1.43
PTPN9-203ENST00000563835 F5H697 171 aa6.11□□□□□ -1.43
PTPN9-203ENST00000563835 TEX46H3BTG2 121 aa6.11□□□□□ -1.43
PTPN9-203ENST00000563835 PDE6DO43924 150 aa6.11□□□□□ -1.43
PTPN9-203ENST00000563835 IFNA1P01562 189 aa6.11□□□□□ -1.43
PTPN9-203ENST00000563835 MGPP08493 103 aa6.11□□□□□ -1.43
PTPN9-203ENST00000563835 GCSHP23434 173 aa6.11□□□□□ -1.43
PTPN9-203ENST00000563835 FER1L6-AS1Q8NA97 138 aa6.11□□□□□ -1.43
PTPN9-203ENST00000563835 AP1S3Q96PC3 154 aa6.11□□□□□ -1.43
PTPN9-203ENST00000563835 KLK12Q9UKR0 248 aa6.11□□□□□ -1.43
PTPN9-203ENST00000563835 BOLA1Q9Y3E2 137 aa6.11□□□□□ -1.43
PTPN9-203ENST00000563835 DNAH8Q96JB1 4490 aa6.1□□□□□ -1.43
PTPN9-203ENST00000563835 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.1□□□□□ -1.43
PTPN9-203ENST00000563835 K7EN84 100 aa6.1□□□□□ -1.43
PTPN9-203ENST00000563835 P01737 135 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms