RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 GAGE13Q4V321 117 aa11.69□□□□□ -0.54
MAP1LC3B-204ENST00000563720 C14orf178Q8N769 122 aaPredicted RBP11.69□□□□□ -0.54
MAP1LC3B-204ENST00000563720 BOLA1Q9Y3E2 137 aa11.69□□□□□ -0.54
MAP1LC3B-204ENST00000563720 IBA57-AS1B1ANH7 110 aa11.68□□□□□ -0.54
MAP1LC3B-204ENST00000563720 PFDN1O60925 122 aa11.68□□□□□ -0.54
MAP1LC3B-204ENST00000563720 S100A9P06702 114 aaKnown RBP11.68□□□□□ -0.54
MAP1LC3B-204ENST00000563720 TPT1P13693 172 aaKnown RBP11.68□□□□□ -0.54
MAP1LC3B-204ENST00000563720 CDPF1Q6NVV7 123 aa11.68□□□□□ -0.54
MAP1LC3B-204ENST00000563720 SFRP2Q96HF1 295 aa11.68□□□□□ -0.54
MAP1LC3B-204ENST00000563720 PHLDA3Q9Y5J5 127 aa11.68□□□□□ -0.54
MAP1LC3B-204ENST00000563720 RHODO00212 210 aa11.67□□□□□ -0.54
MAP1LC3B-204ENST00000563720 IGHV3-30P01768 117 aa11.67□□□□□ -0.54
MAP1LC3B-204ENST00000563720 IGHV3-33P01772 117 aa11.67□□□□□ -0.54
MAP1LC3B-204ENST00000563720 IGHV3-30-3P0DP02 117 aa11.67□□□□□ -0.54
MAP1LC3B-204ENST00000563720 IGHV3-30-5P0DP03 117 aa11.67□□□□□ -0.54
MAP1LC3B-204ENST00000563720 MLST8Q9BVC4 326 aa11.67□□□□□ -0.54
MAP1LC3B-204ENST00000563720 A0A087WWL8 130 aa11.66□□□□□ -0.54
MAP1LC3B-204ENST00000563720 M0R381 172 aa11.66□□□□□ -0.54
MAP1LC3B-204ENST00000563720 FAM74A4Q5TZK3 123 aa11.66□□□□□ -0.54
MAP1LC3B-204ENST00000563720 CCL20P78556 96 aa11.65□□□□□ -0.54
MAP1LC3B-204ENST00000563720 RPL19P84098 196 aaKnown RBP11.65□□□□□ -0.54
MAP1LC3B-204ENST00000563720 ZFP82Q8N141 532 aa11.65□□□□□ -0.54
MAP1LC3B-204ENST00000563720 Q8N3U1 123 aa11.65□□□□□ -0.54
MAP1LC3B-204ENST00000563720 FAT1Q14517 4588 aa11.64□□□□□ -0.55
MAP1LC3B-204ENST00000563720 LRCOL1A6NCL2 159 aa11.64□□□□□ -0.55
MAP1LC3B-204ENST00000563720 BAGE2Q86Y30 109 aa11.64□□□□□ -0.55
MAP1LC3B-204ENST00000563720 Q9HAA7 133 aa11.64□□□□□ -0.55
MAP1LC3B-204ENST00000563720 TRAV1-1A0A0B4J248 108 aa11.63□□□□□ -0.55
MAP1LC3B-204ENST00000563720 CXCL1P09341 107 aa11.63□□□□□ -0.55
MAP1LC3B-204ENST00000563720 PSCAO43653 123 aa11.62□□□□□ -0.55
MAP1LC3B-204ENST00000563720 SMR3BP02814 79 aaPredicted RBP11.62□□□□□ -0.55
MAP1LC3B-204ENST00000563720 RPL35P42766 123 aaKnown RBP11.62□□□□□ -0.55
MAP1LC3B-204ENST00000563720 KRTAP10-1P60331 282 aa11.62□□□□□ -0.55
MAP1LC3B-204ENST00000563720 LAGE3Q14657 143 aa11.62□□□□□ -0.55
MAP1LC3B-204ENST00000563720 TCTE3Q8IZS6 198 aa11.62□□□□□ -0.55
MAP1LC3B-204ENST00000563720 MANBALQ9NQG1 85 aa11.62□□□□□ -0.55
MAP1LC3B-204ENST00000563720 GNG13Q9P2W3 67 aa11.62□□□□□ -0.55
MAP1LC3B-204ENST00000563720 MYCBP2O75592 4640 aa11.62□□□□□ -0.55
MAP1LC3B-204ENST00000563720 A0A087WWC5 75 aa11.61□□□□□ -0.55
MAP1LC3B-204ENST00000563720 RAB5CP51148 216 aa11.61□□□□□ -0.55
MAP1LC3B-204ENST00000563720 OR10AG1Q8NH19 301 aa11.61□□□□□ -0.55
MAP1LC3B-204ENST00000563720 C11orf52Q96A22 123 aa11.61□□□□□ -0.55
MAP1LC3B-204ENST00000563720 DERL1Q9BUN8 251 aa11.61□□□□□ -0.55
MAP1LC3B-204ENST00000563720 FLG2Q5D862 2391 aaPredicted RBP11.6□□□□□ -0.55
MAP1LC3B-204ENST00000563720 VPS13BQ7Z7G8 4022 aa11.6□□□□□ -0.55
MAP1LC3B-204ENST00000563720 TRBV10-1A0A0K0K1A3 114 aa11.6□□□□□ -0.55
MAP1LC3B-204ENST00000563720 FAM229AH3BQW9 127 aa11.6□□□□□ -0.55
MAP1LC3B-204ENST00000563720 J3QL48 77 aa11.6□□□□□ -0.55
MAP1LC3B-204ENST00000563720 SNAI2O43623 268 aa11.6□□□□□ -0.55
MAP1LC3B-204ENST00000563720 EIF5AL1Q6IS14 154 aaKnown RBP11.6□□□□□ -0.55
MAP1LC3B-204ENST00000563720 PRR27Q6MZM9 219 aa11.6□□□□□ -0.55
MAP1LC3B-204ENST00000563720 SSBP4Q9BWG4 385 aaPredicted RBP11.6□□□□□ -0.55
MAP1LC3B-204ENST00000563720 SULT1A2P50226 295 aa11.59□□□□□ -0.55
MAP1LC3B-204ENST00000563720 DAZ4Q86SG3 579 aaKnown RBP11.59□□□□□ -0.55
MAP1LC3B-204ENST00000563720 DAZ3Q9NR90 486 aaKnown RBP11.59□□□□□ -0.55
MAP1LC3B-204ENST00000563720 OR5AL1P0C617 328 aa11.58□□□□□ -0.56
MAP1LC3B-204ENST00000563720 UBE2D3P61077 147 aa11.58□□□□□ -0.56
MAP1LC3B-204ENST00000563720 UBE2D2P62837 147 aa11.58□□□□□ -0.56
MAP1LC3B-204ENST00000563720 Q8N814 137 aa11.58□□□□□ -0.56
MAP1LC3B-204ENST00000563720 OR10G8Q8NGN5 311 aa11.58□□□□□ -0.56
MAP1LC3B-204ENST00000563720 TRBV7-3A0A075B6L6 115 aa11.57□□□□□ -0.56
MAP1LC3B-204ENST00000563720 MUC21A0A0G2JKD1 596 aa11.57□□□□□ -0.56
MAP1LC3B-204ENST00000563720 MUC21A0A140T8X8 626 aa11.57□□□□□ -0.56
MAP1LC3B-204ENST00000563720 IGLV2-8P01709 118 aa11.57□□□□□ -0.56
MAP1LC3B-204ENST00000563720 GCSHP23434 173 aa11.57□□□□□ -0.56
MAP1LC3B-204ENST00000563720 RAB4BP61018 213 aa11.57□□□□□ -0.56
MAP1LC3B-204ENST00000563720 CENPWQ5EE01 88 aa11.57□□□□□ -0.56
MAP1LC3B-204ENST00000563720 NIT1Q86X76 327 aa11.57□□□□□ -0.56
MAP1LC3B-204ENST00000563720 IGLV5-52A0A0A0MRZ9 124 aa11.56□□□□□ -0.56
MAP1LC3B-204ENST00000563720 TRAV8-3A0A0A6YYJ7 113 aa11.56□□□□□ -0.56
MAP1LC3B-204ENST00000563720 TEX46H3BTG2 121 aa11.56□□□□□ -0.56
MAP1LC3B-204ENST00000563720 C1QBP02746 253 aa11.56□□□□□ -0.56
MAP1LC3B-204ENST00000563720 RPL36AP83881 106 aaKnown RBP11.56□□□□□ -0.56
MAP1LC3B-204ENST00000563720 Q6ZNX1 250 aa11.56□□□□□ -0.56
MAP1LC3B-204ENST00000563720 NTN5Q8WTR8 489 aaPredicted RBP11.56□□□□□ -0.56
MAP1LC3B-204ENST00000563720 RPL36ALQ969Q0 106 aaKnown RBP11.56□□□□□ -0.56
MAP1LC3B-204ENST00000563720 TM2D2Q9BX73 214 aa11.56□□□□□ -0.56
MAP1LC3B-204ENST00000563720 DNAH8Q96JB1 4490 aa11.55□□□□□ -0.56
MAP1LC3B-204ENST00000563720 MEF2BQ02080 365 aaPredicted RBP11.55□□□□□ -0.56
MAP1LC3B-204ENST00000563720 WFDC2Q14508 124 aa11.55□□□□□ -0.56
MAP1LC3B-204ENST00000563720 ZNF56Q15929 161 aa11.55□□□□□ -0.56
MAP1LC3B-204ENST00000563720 TOR2AQ5JU69 321 aa11.55□□□□□ -0.56
MAP1LC3B-204ENST00000563720 SPANXN1Q5VSR9 72 aa11.55□□□□□ -0.56
MAP1LC3B-204ENST00000563720 SLC51BQ86UW2 128 aa11.55□□□□□ -0.56
MAP1LC3B-204ENST00000563720 RAB19A4D1S5 217 aa11.54□□□□□ -0.56
MAP1LC3B-204ENST00000563720 HAMPP81172 84 aa11.54□□□□□ -0.56
MAP1LC3B-204ENST00000563720 NEXN-AS1Q8NBZ9 246 aa11.54□□□□□ -0.56
MAP1LC3B-204ENST00000563720 KIF25-AS1Q9Y6Z4 181 aa11.54□□□□□ -0.56
MAP1LC3B-204ENST00000563720 URGCP-MRPS24S4R325 110 aa11.54□□□□□ -0.56
MAP1LC3B-204ENST00000563720 C19orf71A6NCJ1 209 aa11.53□□□□□ -0.56
MAP1LC3B-204ENST00000563720 GZMBP10144 247 aa11.53□□□□□ -0.56
MAP1LC3B-204ENST00000563720 SSTP61278 116 aa11.53□□□□□ -0.56
MAP1LC3B-204ENST00000563720 DNAJC30Q96LL9 226 aa11.53□□□□□ -0.56
MAP1LC3B-204ENST00000563720 TRBV20OR9-2A0A075B6H5 130 aa11.52□□□□□ -0.57
MAP1LC3B-204ENST00000563720 PDE6DO43924 150 aa11.52□□□□□ -0.57
MAP1LC3B-204ENST00000563720 IFNA1P01562 189 aa11.52□□□□□ -0.57
MAP1LC3B-204ENST00000563720 IGLC6P0CF74 106 aa11.52□□□□□ -0.57
MAP1LC3B-204ENST00000563720 BCL2P10415 239 aa11.52□□□□□ -0.57
MAP1LC3B-204ENST00000563720 GNG4P50150 75 aa11.52□□□□□ -0.57
MAP1LC3B-204ENST00000563720 SMIM12Q96EX1 92 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms