RNA–Protein interactions for RNA: ENST00000563688.5

SCAPER-208, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 2

Gene SCAPER, Length 549 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-208	ENST00000563688	KDM6B	O15054	1643 aa		0.29	□□□□□ -2.36
SCAPER-208	ENST00000563688	FAM236A	A0A1B0GUQ0	79 aa		0.29	□□□□□ -2.36
SCAPER-208	ENST00000563688	FAM236B	A0A1B0GV22	79 aa		0.29	□□□□□ -2.36
SCAPER-208	ENST00000563688		M0R2Z0	102 aa		0.29	□□□□□ -2.36
SCAPER-208	ENST00000563688	COX4I1	P13073	169 aa		0.29	□□□□□ -2.36
SCAPER-208	ENST00000563688	SSBP1	Q04837	148 aa	Known RBP	0.29	□□□□□ -2.36
SCAPER-208	ENST00000563688	SPCS2	Q15005	226 aa		0.29	□□□□□ -2.36
SCAPER-208	ENST00000563688	LINC01545	Q5VT33	79 aa		0.29	□□□□□ -2.36
SCAPER-208	ENST00000563688	C4orf33	Q8N1A6	199 aa		0.29	□□□□□ -2.36
SCAPER-208	ENST00000563688	DISP2	A7MBM2	1401 aa		0.29	□□□□□ -2.36
SCAPER-208	ENST00000563688	TNS1	Q9HBL0	1735 aa	Known RBP	0.28	□□□□□ -2.36
SCAPER-208	ENST00000563688	TRAV12-3	A0A0B4J271	114 aa		0.28	□□□□□ -2.36
SCAPER-208	ENST00000563688		M0R129	80 aa		0.28	□□□□□ -2.36
SCAPER-208	ENST00000563688	CCL3L1	P16619	93 aa		0.28	□□□□□ -2.36
SCAPER-208	ENST00000563688	NPC2	P61916	151 aa		0.28	□□□□□ -2.36
SCAPER-208	ENST00000563688	FAM74A4	Q5TZK3	123 aa		0.28	□□□□□ -2.36
SCAPER-208	ENST00000563688	MIC13	Q5XKP0	118 aa		0.28	□□□□□ -2.36
SCAPER-208	ENST00000563688	CTAGE3P	Q8IX95	158 aa		0.28	□□□□□ -2.36
SCAPER-208	ENST00000563688	VSTM2A	Q8TAG5	236 aa		0.28	□□□□□ -2.36
SCAPER-208	ENST00000563688	NDUFA12	Q9UI09	145 aa		0.28	□□□□□ -2.36
SCAPER-208	ENST00000563688	VIRMA	Q69YN4	1812 aa	Known RBP	0.28	□□□□□ -2.36
SCAPER-208	ENST00000563688	IGSF10	Q6WRI0	2623 aa		0.28	□□□□□ -2.37
SCAPER-208	ENST00000563688	PTPRM	P28827	1452 aa		0.28	□□□□□ -2.37
SCAPER-208	ENST00000563688	ASXL3	Q9C0F0	2248 aa		0.28	□□□□□ -2.37
SCAPER-208	ENST00000563688	AHCTF1	Q8WYP5	2266 aa		0.27	□□□□□ -2.37
SCAPER-208	ENST00000563688	C20orf197	Q8N268	126 aa		0.27	□□□□□ -2.37
SCAPER-208	ENST00000563688	LINC00694	P0DN24	101 aa		0.26	□□□□□ -2.37
SCAPER-208	ENST00000563688	SPANXN1	Q5VSR9	72 aa		0.26	□□□□□ -2.37
SCAPER-208	ENST00000563688	RPL7L1	Q6DKI1	246 aa	Known RBP	0.26	□□□□□ -2.37
SCAPER-208	ENST00000563688	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		0.26	□□□□□ -2.37
SCAPER-208	ENST00000563688	COX7B2	Q8TF08	81 aa		0.26	□□□□□ -2.37
SCAPER-208	ENST00000563688	CDK13	Q14004	1512 aa	Known RBP	0.26	□□□□□ -2.37
SCAPER-208	ENST00000563688	AKAP11	Q9UKA4	1901 aa		0.26	□□□□□ -2.37
SCAPER-208	ENST00000563688	PHIP	Q8WWQ0	1821 aa		0.25	□□□□□ -2.37
SCAPER-208	ENST00000563688	SOGA1	O94964	1423 aa		0.25	□□□□□ -2.37
SCAPER-208	ENST00000563688		A0A087WTM6	91 aa		0.25	□□□□□ -2.37
SCAPER-208	ENST00000563688	GVQW2	A0A096LPI5	108 aa	Predicted RBP	0.25	□□□□□ -2.37
SCAPER-208	ENST00000563688	TRBV7-1	A0A0A6YYK4	115 aa		0.25	□□□□□ -2.37
SCAPER-208	ENST00000563688		K7ERU9	68 aa		0.25	□□□□□ -2.37
SCAPER-208	ENST00000563688	TSPAN19	P0C672	248 aa		0.25	□□□□□ -2.37
SCAPER-208	ENST00000563688	PIRT	P0C851	137 aa		0.25	□□□□□ -2.37
SCAPER-208	ENST00000563688	SLC48A1	Q6P1K1	146 aa		0.25	□□□□□ -2.37
SCAPER-208	ENST00000563688	SMIM11B	Q8TCY0	68 aa		0.25	□□□□□ -2.37
SCAPER-208	ENST00000563688	MAFIP	Q8WZ33	124 aa		0.25	□□□□□ -2.37
SCAPER-208	ENST00000563688	PSMG3	Q9BT73	122 aa	Predicted RBP	0.25	□□□□□ -2.37
SCAPER-208	ENST00000563688		V9GYV3	84 aa		0.25	□□□□□ -2.37
SCAPER-208	ENST00000563688	NCOR2	Q9Y618	2525 aa		0.25	□□□□□ -2.37
SCAPER-208	ENST00000563688	FAT4	Q6V0I7	4981 aa		0.25	□□□□□ -2.37
SCAPER-208	ENST00000563688	PARP14	Q460N5	1801 aa		0.24	□□□□□ -2.37
SCAPER-208	ENST00000563688		A6NIN4	97 aa		0.24	□□□□□ -2.37
SCAPER-208	ENST00000563688	NCR2	O95944	276 aa		0.24	□□□□□ -2.37
SCAPER-208	ENST00000563688	APOD	P05090	189 aa		0.24	□□□□□ -2.37
SCAPER-208	ENST00000563688	TSTD1	Q8NFU3	115 aa		0.24	□□□□□ -2.37
SCAPER-208	ENST00000563688	TMEM242	Q9NWH2	141 aa		0.24	□□□□□ -2.37
SCAPER-208	ENST00000563688	COPZ2	Q9P299	210 aa		0.24	□□□□□ -2.37
SCAPER-208	ENST00000563688	DMBT1	Q9UGM3	2413 aa	Predicted RBP	0.24	□□□□□ -2.37
SCAPER-208	ENST00000563688	SPINK1	P00995	79 aa		0.23	□□□□□ -2.37
SCAPER-208	ENST00000563688	COX6A2	Q02221	97 aa		0.23	□□□□□ -2.37
SCAPER-208	ENST00000563688	ALX1	Q15699	326 aa		0.23	□□□□□ -2.37
SCAPER-208	ENST00000563688	RPRM	Q9NS64	109 aa		0.23	□□□□□ -2.37
SCAPER-208	ENST00000563688	MUC5AC	P98088	5654 aa		0.23	□□□□□ -2.37
SCAPER-208	ENST00000563688	LAMC3	Q9Y6N6	1575 aa		0.23	□□□□□ -2.37
SCAPER-208	ENST00000563688		Q5BKY6	102 aa		0.22	□□□□□ -2.37
SCAPER-208	ENST00000563688		Q6ZUT4	128 aa		0.22	□□□□□ -2.37
SCAPER-208	ENST00000563688	NRXN2	Q9P2S2	1712 aa		0.21	□□□□□ -2.38
SCAPER-208	ENST00000563688	NMB	P08949	121 aa		0.21	□□□□□ -2.38
SCAPER-208	ENST00000563688	ACYP2	P14621	99 aa		0.21	□□□□□ -2.38
SCAPER-208	ENST00000563688	C9orf116	Q5BN46	136 aa	Predicted RBP	0.21	□□□□□ -2.38
SCAPER-208	ENST00000563688	ANP32B	Q92688	251 aa	Known RBP	0.21	□□□□□ -2.38
SCAPER-208	ENST00000563688		Q96NJ1	140 aa		0.21	□□□□□ -2.38
SCAPER-208	ENST00000563688	PRG4	Q92954	1404 aa	Predicted RBP	0.21	□□□□□ -2.38
SCAPER-208	ENST00000563688	MUC22	E2RYF6	1773 aa	Predicted RBP	0.2	□□□□□ -2.38
SCAPER-208	ENST00000563688	CACNA1C	Q13936	2221 aa		0.2	□□□□□ -2.38
SCAPER-208	ENST00000563688	OTOG	Q6ZRI0	2925 aa		0.2	□□□□□ -2.38
SCAPER-208	ENST00000563688	LOC105371267	A0A1B0GV96	52 aa		0.2	□□□□□ -2.38
SCAPER-208	ENST00000563688	IL5	P05113	134 aa		0.2	□□□□□ -2.38
SCAPER-208	ENST00000563688	RRAS2	P62070	204 aa	Predicted RBP	0.2	□□□□□ -2.38
SCAPER-208	ENST00000563688	SMIM21	Q3B7S5	101 aa		0.2	□□□□□ -2.38
SCAPER-208	ENST00000563688	ARFGEF1	Q9Y6D6	1849 aa		0.2	□□□□□ -2.38
SCAPER-208	ENST00000563688	CEP152	O94986	1710 aa		0.19	□□□□□ -2.38
SCAPER-208	ENST00000563688	SYNE1	Q8NF91	8797 aa	Known RBP	0.19	□□□□□ -2.38
SCAPER-208	ENST00000563688	NPFF	O15130	113 aa		0.19	□□□□□ -2.38
SCAPER-208	ENST00000563688	PIP	P12273	146 aa	Predicted RBP	0.19	□□□□□ -2.38
SCAPER-208	ENST00000563688	UBE2G1	P62253	170 aa		0.19	□□□□□ -2.38
SCAPER-208	ENST00000563688	SCIMP	Q6UWF3	145 aa		0.19	□□□□□ -2.38
SCAPER-208	ENST00000563688	FAM213B	Q8TBF2	198 aa		0.19	□□□□□ -2.38
SCAPER-208	ENST00000563688	TPT1P8	Q9HAU6	139 aa		0.19	□□□□□ -2.38
SCAPER-208	ENST00000563688	SCP2D1	Q9UJQ7	156 aa		0.19	□□□□□ -2.38
SCAPER-208	ENST00000563688	UNC13B	O14795	1591 aa		0.19	□□□□□ -2.38
SCAPER-208	ENST00000563688	PITX3	O75364	302 aa		0.18	□□□□□ -2.38
SCAPER-208	ENST00000563688	IFNA17	P01571	189 aa		0.18	□□□□□ -2.38
SCAPER-208	ENST00000563688	GCHFR	P30047	84 aa		0.18	□□□□□ -2.38
SCAPER-208	ENST00000563688		Q6ZRX8	168 aa		0.18	□□□□□ -2.38
SCAPER-208	ENST00000563688	C10orf82	Q8WW14	230 aa		0.18	□□□□□ -2.38
SCAPER-208	ENST00000563688	LAMB1	P07942	1786 aa		0.18	□□□□□ -2.38
SCAPER-208	ENST00000563688	FHAD1	B1AJZ9	1412 aa		0.18	□□□□□ -2.38
SCAPER-208	ENST00000563688	UNC79	Q9P2D8	2635 aa		0.17	□□□□□ -2.38
SCAPER-208	ENST00000563688	TRGV1	A0A0A0MS02	117 aa		0.17	□□□□□ -2.38
SCAPER-208	ENST00000563688	SSC5D	A1L4H1	1573 aa		0.17	□□□□□ -2.38
SCAPER-208	ENST00000563688	TMEM14DP	A8MWL7	114 aa		0.17	□□□□□ -2.38

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