RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 IGHV3OR16-12A0A075B7B8 117 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 A0A1B0GUT8 65 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 A0A1B0GW15 77 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 RBMY1BA6NDE4 496 aaKnown RBP3.34□□□□□ -1.87
CDR2-203ENST00000563573 RBMY1EA6NEQ0 496 aaKnown RBP3.34□□□□□ -1.87
CDR2-203ENST00000563573 SMIM9A6NGZ8 99 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 HIGD1CA8MV81 97 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 A8MZ25 164 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 SNURFLB1AK76 121 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 CRXO43186 299 aaPredicted RBP3.34□□□□□ -1.87
CDR2-203ENST00000563573 GNRH2O43555 120 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 SCO1O75880 301 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 RBMY1DP0C7P1 496 aaKnown RBP3.34□□□□□ -1.87
CDR2-203ENST00000563573 ARMS2P0C7Q2 107 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 IGHV4-30-4P0DP06 118 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 GZMBP10144 247 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 TCL1AP56279 114 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 CACNG7P62955 275 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 ELOBQ15370 118 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 TDRG1Q3Y452 100 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 DNLZQ5SXM8 178 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 PRR9Q5T870 116 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 SPANXN1Q5VSR9 72 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 LYZL1Q6UWQ5 148 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 ZNF493Q6ZR52 646 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 ATP5L2Q7Z4Y8 100 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 CBLN2Q8IUK8 224 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 FER1L6-AS1Q8NA97 138 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 NUP35Q8NFH5 326 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 PGLYRP4Q96LB8 373 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 RCHY1Q96PM5 261 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 LINC00467Q9BRT7 94 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 SPXQ9BT56 116 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 PHLDA3Q9Y5J5 127 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 URGCP-MRPS24S4R325 110 aa3.34□□□□□ -1.87
CDR2-203ENST00000563573 TRBV24-1A0A075B6N3 115 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 IGKV3D-20A0A0C4DH25 116 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 USP17L23D6RBM5 183 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 SPINK4O60575 86 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 GAGE7O76087 117 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 TYMSP04818 313 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 OR5AL1P0C617 328 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 GAGE12FP0CL80 117 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 GAGE12GP0CL81 117 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 GAGE12IP0CL82 117 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 SMIM17P0DL12 118 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 NTF3P20783 257 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 RPS10P46783 165 aaKnown RBP3.33□□□□□ -1.88
CDR2-203ENST00000563573 KRTAP10-5P60370 271 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 RAB4BP61018 213 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 SSTP61278 116 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 ZNF415Q09FC8 603 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 GAGE1Q13065 139 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 GAGE4Q13068 117 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 RRN3P1Q2M238 152 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 RASL11AQ6T310 242 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 Q6ZQT7 251 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 C1orf158Q8N1D5 194 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 FAM210BQ96KR6 192 aa3.33□□□□□ -1.88
CDR2-203ENST00000563573 TIMM8BQ9Y5J9 83 aaPredicted RBP3.33□□□□□ -1.88
CDR2-203ENST00000563573 NOTCH3Q9UM47 2321 aa3.32□□□□□ -1.88
CDR2-203ENST00000563573 TGIF2-C20orf24A0A0A6YYL0 155 aa3.32□□□□□ -1.88
CDR2-203ENST00000563573 IGHV3-16A0A0C4DH30 117 aa3.32□□□□□ -1.88
CDR2-203ENST00000563573 COLCA2A8K830 154 aa3.32□□□□□ -1.88
CDR2-203ENST00000563573 H3BVH4 76 aa3.32□□□□□ -1.88
CDR2-203ENST00000563573 SNAI2O43623 268 aa3.32□□□□□ -1.88
CDR2-203ENST00000563573 TRGC1P0CF51 173 aa3.32□□□□□ -1.88
CDR2-203ENST00000563573 IGLC6P0CF74 106 aa3.32□□□□□ -1.88
CDR2-203ENST00000563573 CAMPP49913 170 aa3.32□□□□□ -1.88
CDR2-203ENST00000563573 HBBP68871 147 aa3.32□□□□□ -1.88
CDR2-203ENST00000563573 KPRPQ5T749 579 aaPredicted RBP3.32□□□□□ -1.88
CDR2-203ENST00000563573 MRPL54Q6P161 138 aaKnown RBP3.32□□□□□ -1.88
CDR2-203ENST00000563573 ZFP82Q8N141 532 aa3.32□□□□□ -1.88
CDR2-203ENST00000563573 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.32□□□□□ -1.88
CDR2-203ENST00000563573 CSNK1G2-AS1Q8NCQ2 148 aa3.32□□□□□ -1.88
CDR2-203ENST00000563573 TMEM263Q8WUH6 116 aaKnown RBP3.32□□□□□ -1.88
CDR2-203ENST00000563573 GTSF1Q8WW33 167 aa3.32□□□□□ -1.88
CDR2-203ENST00000563573 FRZBQ92765 325 aa3.32□□□□□ -1.88
CDR2-203ENST00000563573 C16orf74Q96GX8 76 aa3.32□□□□□ -1.88
CDR2-203ENST00000563573 GNB1LQ9BYB4 327 aa3.32□□□□□ -1.88
CDR2-203ENST00000563573 TP53TG3Q9ULZ0 132 aa3.32□□□□□ -1.88
CDR2-203ENST00000563573 TP53TG1Q9Y2A0 90 aa3.32□□□□□ -1.88
CDR2-203ENST00000563573 TRAPPC1Q9Y5R8 145 aa3.32□□□□□ -1.88
CDR2-203ENST00000563573 IGHV4-4A0A075B6R2 117 aa3.31□□□□□ -1.88
CDR2-203ENST00000563573 MUC21A0A0G2JKD1 596 aa3.31□□□□□ -1.88
CDR2-203ENST00000563573 MUC21A0A140T8X8 626 aa3.31□□□□□ -1.88
CDR2-203ENST00000563573 M0R2P5 195 aa3.31□□□□□ -1.88
CDR2-203ENST00000563573 M0R381 172 aa3.31□□□□□ -1.88
CDR2-203ENST00000563573 CIDEAO60543 219 aa3.31□□□□□ -1.88
CDR2-203ENST00000563573 HLA-DQA1P01909 254 aa3.31□□□□□ -1.88
CDR2-203ENST00000563573 MT-ND6P03923 174 aa3.31□□□□□ -1.88
CDR2-203ENST00000563573 GIG44P09565 113 aaPredicted RBP3.31□□□□□ -1.88
CDR2-203ENST00000563573 FRMD6-AS1P0C7T7 363 aa3.31□□□□□ -1.88
CDR2-203ENST00000563573 RBMY1A1P0DJD3 496 aaKnown RBP3.31□□□□□ -1.88
CDR2-203ENST00000563573 RBMY1CP0DJD4 496 aa3.31□□□□□ -1.88
CDR2-203ENST00000563573 RNASE3P12724 160 aaKnown RBP3.31□□□□□ -1.88
CDR2-203ENST00000563573 MIFP14174 115 aa3.31□□□□□ -1.88
CDR2-203ENST00000563573 AZU1P20160 251 aa3.31□□□□□ -1.88
CDR2-203ENST00000563573 RAB5AP20339 215 aa3.31□□□□□ -1.88
CDR2-203ENST00000563573 FABP9Q0Z7S8 132 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms