RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 TRGV4A0A0C4DH28 118 aa10.9□□□□□ -0.66
USB1-208ENST00000563207 CACNG7P62955 275 aa10.9□□□□□ -0.66
USB1-208ENST00000563207 PNRC1Q12796 327 aaPredicted RBP10.9□□□□□ -0.66
USB1-208ENST00000563207 FHL2Q14192 279 aa10.9□□□□□ -0.66
USB1-208ENST00000563207 ADIRFQ15847 76 aa10.9□□□□□ -0.66
USB1-208ENST00000563207 SPANXN1Q5VSR9 72 aa10.9□□□□□ -0.66
USB1-208ENST00000563207 WDR73Q6P4I2 378 aa10.9□□□□□ -0.66
USB1-208ENST00000563207 SFRP2Q96HF1 295 aa10.9□□□□□ -0.66
USB1-208ENST00000563207 ZNF479Q96JC4 524 aa10.9□□□□□ -0.66
USB1-208ENST00000563207 HHLA3Q9XRX5 114 aa10.9□□□□□ -0.66
USB1-208ENST00000563207 TRAV26-1A0A087WT03 109 aa10.89□□□□□ -0.67
USB1-208ENST00000563207 FAM231BA6NCW3 169 aa10.89□□□□□ -0.67
USB1-208ENST00000563207 M0R381 172 aa10.89□□□□□ -0.67
USB1-208ENST00000563207 RHODO00212 210 aa10.89□□□□□ -0.67
USB1-208ENST00000563207 IGHV3-53P01767 116 aa10.89□□□□□ -0.67
USB1-208ENST00000563207 GZMBP10144 247 aa10.89□□□□□ -0.67
USB1-208ENST00000563207 FOXA3P55318 350 aaPredicted RBP10.89□□□□□ -0.67
USB1-208ENST00000563207 RNF212Q495C1 297 aa10.89□□□□□ -0.67
USB1-208ENST00000563207 COMMD7Q86VX2 200 aa10.89□□□□□ -0.67
USB1-208ENST00000563207 TMEM218A2RU14 115 aa10.88□□□□□ -0.67
USB1-208ENST00000563207 NUDT3O95989 172 aa10.88□□□□□ -0.67
USB1-208ENST00000563207 OR10AG1Q8NH19 301 aa10.88□□□□□ -0.67
USB1-208ENST00000563207 GFRA4Q9GZZ7 299 aa10.88□□□□□ -0.67
USB1-208ENST00000563207 PAX4O43316 350 aa10.87□□□□□ -0.67
USB1-208ENST00000563207 CTRLP40313 264 aa10.87□□□□□ -0.67
USB1-208ENST00000563207 CRYBA4P53673 196 aa10.87□□□□□ -0.67
USB1-208ENST00000563207 OR10G8Q8NGN5 311 aa10.87□□□□□ -0.67
USB1-208ENST00000563207 TSKUQ8WUA8 353 aa10.87□□□□□ -0.67
USB1-208ENST00000563207 TPPP3Q9BW30 176 aa10.87□□□□□ -0.67
USB1-208ENST00000563207 CNFNQ9BYD5 112 aa10.87□□□□□ -0.67
USB1-208ENST00000563207 TRBV6-4A0A1B0GX49 114 aa10.86□□□□□ -0.67
USB1-208ENST00000563207 GATA1P15976 413 aaPredicted RBP10.86□□□□□ -0.67
USB1-208ENST00000563207 LYZL1Q6UWQ5 148 aa10.86□□□□□ -0.67
USB1-208ENST00000563207 V9GYV3 84 aa10.86□□□□□ -0.67
USB1-208ENST00000563207 C1orf134Q5TEV5 83 aa10.85□□□□□ -0.67
USB1-208ENST00000563207 UFSP1Q6NVU6 142 aa10.85□□□□□ -0.67
USB1-208ENST00000563207 ZNRF2Q8NHG8 242 aa10.85□□□□□ -0.67
USB1-208ENST00000563207 VSIG2Q96IQ7 327 aa10.85□□□□□ -0.67
USB1-208ENST00000563207 AP1S3Q96PC3 154 aa10.85□□□□□ -0.67
USB1-208ENST00000563207 SEC11CQ9BY50 192 aa10.85□□□□□ -0.67
USB1-208ENST00000563207 RYR1P21817 5038 aa10.84□□□□□ -0.67
USB1-208ENST00000563207 A0A0J9YY99 117 aa10.84□□□□□ -0.67
USB1-208ENST00000563207 F8W036 122 aa10.84□□□□□ -0.67
USB1-208ENST00000563207 PPP1R2P9O14990 202 aa10.84□□□□□ -0.67
USB1-208ENST00000563207 CRYGDP07320 174 aa10.84□□□□□ -0.67
USB1-208ENST00000563207 TRGC1P0CF51 173 aa10.84□□□□□ -0.67
USB1-208ENST00000563207 SMIM17P0DL12 118 aa10.84□□□□□ -0.67
USB1-208ENST00000563207 GTSF1Q8WW33 167 aa10.84□□□□□ -0.67
USB1-208ENST00000563207 JPT2Q9H910 190 aa10.84□□□□□ -0.67
USB1-208ENST00000563207 LINC00588Q9Y4M8 146 aa10.84□□□□□ -0.67
USB1-208ENST00000563207 NTF3P20783 257 aa10.83□□□□□ -0.68
USB1-208ENST00000563207 TNP2Q05952 138 aa10.83□□□□□ -0.68
USB1-208ENST00000563207 RHOHQ15669 191 aa10.83□□□□□ -0.68
USB1-208ENST00000563207 MRPL23Q16540 153 aaKnown RBP10.83□□□□□ -0.68
USB1-208ENST00000563207 SLC25A29Q8N8R3 303 aa10.83□□□□□ -0.68
USB1-208ENST00000563207 BORCS7Q96B45 105 aa10.83□□□□□ -0.68
USB1-208ENST00000563207 PRADC1Q9BSG0 188 aa10.83□□□□□ -0.68
USB1-208ENST00000563207 SAMD10Q9BYL1 202 aa10.83□□□□□ -0.68
USB1-208ENST00000563207 KRTAP4-5Q9BYR2 181 aa10.83□□□□□ -0.68
USB1-208ENST00000563207 ICOSQ9Y6W8 199 aa10.83□□□□□ -0.68
USB1-208ENST00000563207 ABCA13Q86UQ4 5058 aa10.82□□□□□ -0.68
USB1-208ENST00000563207 HIGD1CA8MV81 97 aa10.82□□□□□ -0.68
USB1-208ENST00000563207 MT-ND4LP03901 98 aa10.82□□□□□ -0.68
USB1-208ENST00000563207 FAM74A4Q5TZK3 123 aa10.82□□□□□ -0.68
USB1-208ENST00000563207 SH2D6Q7Z4S9 175 aa10.82□□□□□ -0.68
USB1-208ENST00000563207 ANAPC16Q96DE5 110 aa10.82□□□□□ -0.68
USB1-208ENST00000563207 A0A087WWL8 130 aa10.81□□□□□ -0.68
USB1-208ENST00000563207 A0A096LPF7 62 aa10.81□□□□□ -0.68
USB1-208ENST00000563207 IGHV3-73A0A0B4J1V6 119 aa10.81□□□□□ -0.68
USB1-208ENST00000563207 MUC21A0A0G2JKD1 596 aa10.81□□□□□ -0.68
USB1-208ENST00000563207 NBDYA0A0U1RRE5 68 aa10.81□□□□□ -0.68
USB1-208ENST00000563207 MUC21A0A140T8X8 626 aa10.81□□□□□ -0.68
USB1-208ENST00000563207 RAB4BP61018 213 aa10.81□□□□□ -0.68
USB1-208ENST00000563207 NAT8BQ9UHF3 227 aa10.81□□□□□ -0.68
USB1-208ENST00000563207 HSPG2P98160 4391 aa10.8□□□□□ -0.68
USB1-208ENST00000563207 A0A1B0GUT8 65 aa10.8□□□□□ -0.68
USB1-208ENST00000563207 SMIM27A0A1W2PRY6 76 aa10.8□□□□□ -0.68
USB1-208ENST00000563207 K7EQD1 137 aa10.8□□□□□ -0.68
USB1-208ENST00000563207 GYPEP15421 78 aa10.8□□□□□ -0.68
USB1-208ENST00000563207 ADCYAP1P18509 176 aa10.8□□□□□ -0.68
USB1-208ENST00000563207 CCL18P55774 89 aa10.8□□□□□ -0.68
USB1-208ENST00000563207 FAM3BP58499 235 aaPredicted RBP10.8□□□□□ -0.68
USB1-208ENST00000563207 SSTP61278 116 aa10.8□□□□□ -0.68
USB1-208ENST00000563207 TWIST1Q15672 202 aa10.8□□□□□ -0.68
USB1-208ENST00000563207 C10orf91Q5T1B1 145 aa10.8□□□□□ -0.68
USB1-208ENST00000563207 SMIM15Q7Z3B0 74 aa10.8□□□□□ -0.68
USB1-208ENST00000563207 C14orf178Q8N769 122 aaPredicted RBP10.8□□□□□ -0.68
USB1-208ENST00000563207 PGLYRP4Q96LB8 373 aa10.8□□□□□ -0.68
USB1-208ENST00000563207 KRTAP1-5Q9BYS1 174 aa10.8□□□□□ -0.68
USB1-208ENST00000563207 KIF25-AS1Q9Y6Z4 181 aa10.8□□□□□ -0.68
USB1-208ENST00000563207 TRBV10-1A0A0K0K1A3 114 aa10.79□□□□□ -0.68
USB1-208ENST00000563207 SRIP30626 198 aa10.79□□□□□ -0.68
USB1-208ENST00000563207 DPH3P1Q9H4G8 78 aa10.79□□□□□ -0.68
USB1-208ENST00000563207 MSRB1Q9NZV6 116 aa10.79□□□□□ -0.68
USB1-208ENST00000563207 ZNF56Q15929 161 aa10.78□□□□□ -0.68
USB1-208ENST00000563207 NEGR1Q7Z3B1 354 aa10.78□□□□□ -0.68
USB1-208ENST00000563207 NUP35Q8NFH5 326 aa10.78□□□□□ -0.68
USB1-208ENST00000563207 A0A1B0GW15 77 aa10.77□□□□□ -0.69
USB1-208ENST00000563207 H7C1H1 209 aa10.77□□□□□ -0.69
USB1-208ENST00000563207 EVI2AP22794 236 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms