RNA–Protein interactions for RNA: ENST00000562325.5

CDH11-203, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-203ENST00000562325 JPT2Q9H910 190 aa12.58□□□□□ -0.4
CDH11-203ENST00000562325 ARL2-SNX15V9GYD0 113 aa12.58□□□□□ -0.4
CDH11-203ENST00000562325 B4DEV8 164 aa12.57□□□□□ -0.4
CDH11-203ENST00000562325 RPL37AP61513 92 aaKnown RBP12.57□□□□□ -0.4
CDH11-203ENST00000562325 SFRP2Q96HF1 295 aa12.57□□□□□ -0.4
CDH11-203ENST00000562325 NKX6-2Q9C056 277 aaPredicted RBP12.57□□□□□ -0.4
CDH11-203ENST00000562325 TNFSF18Q9UNG2 199 aa12.57□□□□□ -0.4
CDH11-203ENST00000562325 PKIAP61925 76 aa12.56□□□□□ -0.4
CDH11-203ENST00000562325 RPL36AP83881 106 aaKnown RBP12.56□□□□□ -0.4
CDH11-203ENST00000562325 RPL36ALQ969Q0 106 aaKnown RBP12.56□□□□□ -0.4
CDH11-203ENST00000562325 DNAJC30Q96LL9 226 aa12.56□□□□□ -0.4
CDH11-203ENST00000562325 ACTR3CQ9C0K3 210 aaPredicted RBP12.56□□□□□ -0.4
CDH11-203ENST00000562325 TRBV7-3A0A075B6L6 115 aa12.55□□□□□ -0.4
CDH11-203ENST00000562325 KRBOX1C9JBD0 128 aa12.55□□□□□ -0.4
CDH11-203ENST00000562325 H3BVH4 76 aa12.55□□□□□ -0.4
CDH11-203ENST00000562325 ARMS2P0C7Q2 107 aa12.55□□□□□ -0.4
CDH11-203ENST00000562325 UBE2D3P61077 147 aa12.55□□□□□ -0.4
CDH11-203ENST00000562325 UBE2D2P62837 147 aa12.55□□□□□ -0.4
CDH11-203ENST00000562325 DGAT2L7PQ6IED9 249 aa12.55□□□□□ -0.4
CDH11-203ENST00000562325 HSD17B11Q8NBQ5 300 aa12.55□□□□□ -0.4
CDH11-203ENST00000562325 ATP6V0CP27449 155 aa12.54□□□□□ -0.4
CDH11-203ENST00000562325 FAM74A4Q5TZK3 123 aa12.54□□□□□ -0.4
CDH11-203ENST00000562325 Q86TA4 180 aa12.54□□□□□ -0.4
CDH11-203ENST00000562325 OR10G8Q8NGN5 311 aa12.54□□□□□ -0.4
CDH11-203ENST00000562325 HIST1H2BAQ96A08 127 aa12.54□□□□□ -0.4
CDH11-203ENST00000562325 ZFP30Q9Y2G7 519 aa12.54□□□□□ -0.4
CDH11-203ENST00000562325 PHLDA3Q9Y5J5 127 aa12.54□□□□□ -0.4
CDH11-203ENST00000562325 CRPP02741 224 aa12.53□□□□□ -0.4
CDH11-203ENST00000562325 IFITM3Q01628 133 aa12.53□□□□□ -0.4
CDH11-203ENST00000562325 ZFP82Q8N141 532 aa12.53□□□□□ -0.4
CDH11-203ENST00000562325 AQP10Q96PS8 301 aa12.53□□□□□ -0.4
CDH11-203ENST00000562325 TRBV6-8A0A0A6YYG3 113 aa12.52□□□□□ -0.41
CDH11-203ENST00000562325 TRAV34A0A0B4J273 112 aa12.52□□□□□ -0.41
CDH11-203ENST00000562325 IFNA7P01567 189 aa12.52□□□□□ -0.41
CDH11-203ENST00000562325 TPT1P13693 172 aaKnown RBP12.52□□□□□ -0.41
CDH11-203ENST00000562325 MIAQ16674 131 aa12.52□□□□□ -0.41
CDH11-203ENST00000562325 FAM162BQ5T6X4 162 aa12.52□□□□□ -0.41
CDH11-203ENST00000562325 ENHOQ6UWT2 76 aa12.52□□□□□ -0.41
CDH11-203ENST00000562325 PEX7O00628 323 aa12.51□□□□□ -0.41
CDH11-203ENST00000562325 DEFA1P59665 94 aa12.51□□□□□ -0.41
CDH11-203ENST00000562325 DEFA3P59666 94 aa12.51□□□□□ -0.41
CDH11-203ENST00000562325 C9orf163Q8N9P6 203 aa12.51□□□□□ -0.41
CDH11-203ENST00000562325 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.51□□□□□ -0.41
CDH11-203ENST00000562325 A0A087WWL8 130 aa12.5□□□□□ -0.41
CDH11-203ENST00000562325 CRIP1P50238 77 aa12.5□□□□□ -0.41
CDH11-203ENST00000562325 LINC01559Q495D7 138 aa12.5□□□□□ -0.41
CDH11-203ENST00000562325 DAZAP1Q96EP5 407 aaKnown RBP12.5□□□□□ -0.41
CDH11-203ENST00000562325 ZC2HC1AQ96GY0 325 aa12.5□□□□□ -0.41
CDH11-203ENST00000562325 TCEAL7Q9BRU2 100 aa12.5□□□□□ -0.41
CDH11-203ENST00000562325 PKHD1L1Q86WI1 4243 aa12.49□□□□□ -0.41
CDH11-203ENST00000562325 USP17L23D6RBM5 183 aa12.49□□□□□ -0.41
CDH11-203ENST00000562325 TMEM262E9PQX1 116 aa12.49□□□□□ -0.41
CDH11-203ENST00000562325 SH2D1AO60880 128 aa12.49□□□□□ -0.41
CDH11-203ENST00000562325 RPL19P84098 196 aaKnown RBP12.49□□□□□ -0.41
CDH11-203ENST00000562325 Q6ZRU5 148 aa12.49□□□□□ -0.41
CDH11-203ENST00000562325 FMC1Q96HJ9 113 aa12.49□□□□□ -0.41
CDH11-203ENST00000562325 TRBV6-1A0A0K0K1D8 114 aa12.48□□□□□ -0.41
CDH11-203ENST00000562325 M0R036 132 aa12.48□□□□□ -0.41
CDH11-203ENST00000562325 M0R381 172 aa12.48□□□□□ -0.41
CDH11-203ENST00000562325 RAB4BP61018 213 aa12.48□□□□□ -0.41
CDH11-203ENST00000562325 ZNF674Q2M3X9 581 aa12.48□□□□□ -0.41
CDH11-203ENST00000562325 TMEM97Q5BJF2 176 aa12.48□□□□□ -0.41
CDH11-203ENST00000562325 CTXND1A0A1B0GTU2 59 aa12.47□□□□□ -0.41
CDH11-203ENST00000562325 MPV17L2Q567V2 206 aa12.47□□□□□ -0.41
CDH11-203ENST00000562325 C15orf54Q8N8G6 183 aa12.47□□□□□ -0.41
CDH11-203ENST00000562325 PRR34Q9NV39 138 aa12.47□□□□□ -0.41
CDH11-203ENST00000562325 A0A0D9SG52 128 aa12.46□□□□□ -0.41
CDH11-203ENST00000562325 GRIFINA4D1Z8 144 aa12.46□□□□□ -0.41
CDH11-203ENST00000562325 FAM74A7A6NL05 159 aa12.46□□□□□ -0.41
CDH11-203ENST00000562325 ANGP03950 147 aaKnown RBP12.46□□□□□ -0.41
CDH11-203ENST00000562325 HNRNPA3P51991 378 aaKnown RBP12.46□□□□□ -0.41
CDH11-203ENST00000562325 PRR27Q6MZM9 219 aa12.46□□□□□ -0.41
CDH11-203ENST00000562325 CLRN3Q8NCR9 226 aa12.46□□□□□ -0.41
CDH11-203ENST00000562325 PRSS1P07477 247 aa12.45□□□□□ -0.42
CDH11-203ENST00000562325 CXCL1P09341 107 aa12.45□□□□□ -0.42
CDH11-203ENST00000562325 MT1HL1P0DM35 61 aa12.45□□□□□ -0.42
CDH11-203ENST00000562325 HLA-DQA1P01909 254 aa12.44□□□□□ -0.42
CDH11-203ENST00000562325 UBE2G1P62253 170 aa12.44□□□□□ -0.42
CDH11-203ENST00000562325 CIRBPQ14011 172 aaKnown RBP12.44□□□□□ -0.42
CDH11-203ENST00000562325 NEXN-AS1Q8NBZ9 246 aa12.44□□□□□ -0.42
CDH11-203ENST00000562325 VAX2Q9UIW0 290 aa12.44□□□□□ -0.42
CDH11-203ENST00000562325 PTTG1O95997 202 aa12.43□□□□□ -0.42
CDH11-203ENST00000562325 LTAP01374 205 aa12.43□□□□□ -0.42
CDH11-203ENST00000562325 FHITP49789 147 aa12.43□□□□□ -0.42
CDH11-203ENST00000562325 ZNF726P1Q15940 193 aa12.43□□□□□ -0.42
CDH11-203ENST00000562325 SDIM1Q6ZPB5 146 aa12.43□□□□□ -0.42
CDH11-203ENST00000562325 CHCHD5Q9BSY4 110 aa12.43□□□□□ -0.42
CDH11-203ENST00000562325 BORCS7-ASMTA0A0B4J1R7 106 aa12.42□□□□□ -0.42
CDH11-203ENST00000562325 UBE2G2P60604 165 aa12.42□□□□□ -0.42
CDH11-203ENST00000562325 CNBPP62633 177 aaKnown RBP12.42□□□□□ -0.42
CDH11-203ENST00000562325 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.42□□□□□ -0.42
CDH11-203ENST00000562325 KRTAP26-1Q6PEX3 210 aa12.41□□□□□ -0.42
CDH11-203ENST00000562325 INO80EQ8NBZ0 244 aaPredicted RBP12.41□□□□□ -0.42
CDH11-203ENST00000562325 RNF185Q96GF1 192 aa12.41□□□□□ -0.42
CDH11-203ENST00000562325 ZNF56Q15929 161 aa12.4□□□□□ -0.42
CDH11-203ENST00000562325 ZNF471Q9BX82 626 aaPredicted RBP12.4□□□□□ -0.42
CDH11-203ENST00000562325 TMSB15BA0A087X1C1 80 aa12.39□□□□□ -0.43
CDH11-203ENST00000562325 SSBP4Q9BWG4 385 aaPredicted RBP12.39□□□□□ -0.43
CDH11-203ENST00000562325 A6NHS1 94 aa12.38□□□□□ -0.43
CDH11-203ENST00000562325 S100A9P06702 114 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms