RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 SMIM17P0DL12 118 aa9.76□□□□□ -0.85
IFT140-205ENST00000561954 SRIP30626 198 aa9.76□□□□□ -0.85
IFT140-205ENST00000561954 CCL18P55774 89 aa9.76□□□□□ -0.85
IFT140-205ENST00000561954 MRPL23Q16540 153 aaKnown RBP9.76□□□□□ -0.85
IFT140-205ENST00000561954 SH2D6Q7Z4S9 175 aa9.76□□□□□ -0.85
IFT140-205ENST00000561954 BORCS7Q96B45 105 aa9.76□□□□□ -0.85
IFT140-205ENST00000561954 CNFNQ9BYD5 112 aa9.76□□□□□ -0.85
IFT140-205ENST00000561954 GFRA4Q9GZZ7 299 aa9.76□□□□□ -0.85
IFT140-205ENST00000561954 IGHV3-73A0A0B4J1V6 119 aa9.75□□□□□ -0.85
IFT140-205ENST00000561954 FAM231BA6NCW3 169 aa9.75□□□□□ -0.85
IFT140-205ENST00000561954 K7EQD1 137 aa9.75□□□□□ -0.85
IFT140-205ENST00000561954 UFSP1Q6NVU6 142 aa9.75□□□□□ -0.85
IFT140-205ENST00000561954 WDR73Q6P4I2 378 aa9.75□□□□□ -0.85
IFT140-205ENST00000561954 LYZL1Q6UWQ5 148 aa9.75□□□□□ -0.85
IFT140-205ENST00000561954 COMMD7Q86VX2 200 aa9.75□□□□□ -0.85
IFT140-205ENST00000561954 SLC25A29Q8N8R3 303 aa9.75□□□□□ -0.85
IFT140-205ENST00000561954 TSKUQ8WUA8 353 aa9.75□□□□□ -0.85
IFT140-205ENST00000561954 MUC4Q99102 2169 aa9.75□□□□□ -0.85
IFT140-205ENST00000561954 RYR2Q92736 4967 aa9.74□□□□□ -0.85
IFT140-205ENST00000561954 A0A087WWL8 130 aa9.74□□□□□ -0.85
IFT140-205ENST00000561954 A0A096LPF7 62 aa9.74□□□□□ -0.85
IFT140-205ENST00000561954 GYPEP15421 78 aa9.74□□□□□ -0.85
IFT140-205ENST00000561954 OR10G8Q8NGN5 311 aa9.74□□□□□ -0.85
IFT140-205ENST00000561954 MUC21A0A0G2JKD1 596 aa9.73□□□□□ -0.85
IFT140-205ENST00000561954 MUC21A0A140T8X8 626 aa9.73□□□□□ -0.85
IFT140-205ENST00000561954 CRYGDP07320 174 aa9.73□□□□□ -0.85
IFT140-205ENST00000561954 ZNF56Q15929 161 aa9.73□□□□□ -0.85
IFT140-205ENST00000561954 SMIM15Q7Z3B0 74 aa9.73□□□□□ -0.85
IFT140-205ENST00000561954 NEGR1Q7Z3B1 354 aa9.73□□□□□ -0.85
IFT140-205ENST00000561954 GTSF1Q8WW33 167 aa9.73□□□□□ -0.85
IFT140-205ENST00000561954 SAMD10Q9BYL1 202 aa9.73□□□□□ -0.85
IFT140-205ENST00000561954 JPT2Q9H910 190 aa9.73□□□□□ -0.85
IFT140-205ENST00000561954 V9GYV3 84 aa9.73□□□□□ -0.85
IFT140-205ENST00000561954 TRBV10-1A0A0K0K1A3 114 aa9.72□□□□□ -0.85
IFT140-205ENST00000561954 LINC00862A6NCI5 91 aa9.72□□□□□ -0.85
IFT140-205ENST00000561954 PPP1R2P9O14990 202 aa9.72□□□□□ -0.85
IFT140-205ENST00000561954 FOXA3P55318 350 aaPredicted RBP9.72□□□□□ -0.85
IFT140-205ENST00000561954 RAB4BP61018 213 aa9.72□□□□□ -0.85
IFT140-205ENST00000561954 VPS13DQ5THJ4 4388 aa9.72□□□□□ -0.85
IFT140-205ENST00000561954 HIGD1CA8MV81 97 aa9.71□□□□□ -0.86
IFT140-205ENST00000561954 SSTP61278 116 aa9.71□□□□□ -0.86
IFT140-205ENST00000561954 TWIST1Q15672 202 aa9.71□□□□□ -0.86
IFT140-205ENST00000561954 C14orf178Q8N769 122 aaPredicted RBP9.71□□□□□ -0.86
IFT140-205ENST00000561954 TMEM218A2RU14 115 aa9.7□□□□□ -0.86
IFT140-205ENST00000561954 F8W036 122 aa9.7□□□□□ -0.86
IFT140-205ENST00000561954 H7C1H1 209 aa9.7□□□□□ -0.86
IFT140-205ENST00000561954 NTF3P20783 257 aa9.7□□□□□ -0.86
IFT140-205ENST00000561954 PGLYRP4Q96LB8 373 aa9.7□□□□□ -0.86
IFT140-205ENST00000561954 DPH3P1Q9H4G8 78 aa9.7□□□□□ -0.86
IFT140-205ENST00000561954 NAT8BQ9UHF3 227 aa9.7□□□□□ -0.86
IFT140-205ENST00000561954 MRPS16Q9Y3D3 137 aaKnown RBP9.7□□□□□ -0.86
IFT140-205ENST00000561954 RYR3Q15413 4870 aa9.7□□□□□ -0.86
IFT140-205ENST00000561954 A0A1B0GUT8 65 aa9.69□□□□□ -0.86
IFT140-205ENST00000561954 MGPP08493 103 aa9.69□□□□□ -0.86
IFT140-205ENST00000561954 TIRAPP58753 221 aa9.69□□□□□ -0.86
IFT140-205ENST00000561954 UPK3BQ9BT76 320 aa9.69□□□□□ -0.86
IFT140-205ENST00000561954 SEC11CQ9BY50 192 aa9.69□□□□□ -0.86
IFT140-205ENST00000561954 LINC00588Q9Y4M8 146 aa9.69□□□□□ -0.86
IFT140-205ENST00000561954 LOC100131303A0A0U1RQF7 123 aa9.68□□□□□ -0.86
IFT140-205ENST00000561954 F5H697 171 aa9.68□□□□□ -0.86
IFT140-205ENST00000561954 MT-ND4LP03901 98 aa9.68□□□□□ -0.86
IFT140-205ENST00000561954 RPL36AP83881 106 aaKnown RBP9.68□□□□□ -0.86
IFT140-205ENST00000561954 RPL36ALQ969Q0 106 aaKnown RBP9.68□□□□□ -0.86
IFT140-205ENST00000561954 ANAPC16Q96DE5 110 aa9.68□□□□□ -0.86
IFT140-205ENST00000561954 MSRB1Q9NZV6 116 aa9.68□□□□□ -0.86
IFT140-205ENST00000561954 KIF25-AS1Q9Y6Z4 181 aa9.68□□□□□ -0.86
IFT140-205ENST00000561954 DNAH6Q9C0G6 4158 aa9.68□□□□□ -0.86
IFT140-205ENST00000561954 NACAE9PAV3 2078 aa9.67□□□□□ -0.86
IFT140-205ENST00000561954 SMIM27A0A1W2PRY6 76 aa9.67□□□□□ -0.86
IFT140-205ENST00000561954 GAGE12JA6NER3 117 aa9.67□□□□□ -0.86
IFT140-205ENST00000561954 LINC00694P0DN24 101 aa9.67□□□□□ -0.86
IFT140-205ENST00000561954 EVI2AP22794 236 aa9.67□□□□□ -0.86
IFT140-205ENST00000561954 GAGE1Q13065 139 aa9.67□□□□□ -0.86
IFT140-205ENST00000561954 GAGE4Q13068 117 aa9.67□□□□□ -0.86
IFT140-205ENST00000561954 GAGE5Q13069 117 aa9.67□□□□□ -0.86
IFT140-205ENST00000561954 RIGQ13278 110 aa9.67□□□□□ -0.86
IFT140-205ENST00000561954 ESRGQ1W209 222 aa9.67□□□□□ -0.86
IFT140-205ENST00000561954 GAGE13Q4V321 117 aa9.67□□□□□ -0.86
IFT140-205ENST00000561954 Q6ZSN1 163 aa9.67□□□□□ -0.86
IFT140-205ENST00000561954 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.67□□□□□ -0.86
IFT140-205ENST00000561954 HYDINQ4G0P3 5121 aa9.67□□□□□ -0.86
IFT140-205ENST00000561954 A0A1B0GW15 77 aa9.66□□□□□ -0.86
IFT140-205ENST00000561954 ADCYAP1P18509 176 aa9.66□□□□□ -0.86
IFT140-205ENST00000561954 LYPD5Q6UWN5 251 aa9.66□□□□□ -0.86
IFT140-205ENST00000561954 NUP35Q8NFH5 326 aa9.66□□□□□ -0.86
IFT140-205ENST00000561954 ATP6V0E2Q8NHE4 81 aa9.66□□□□□ -0.86
IFT140-205ENST00000561954 ZNRF2Q8NHG8 242 aa9.66□□□□□ -0.86
IFT140-205ENST00000561954 TRBV7-3A0A075B6L6 115 aa9.65□□□□□ -0.86
IFT140-205ENST00000561954 S100A8P05109 93 aa9.65□□□□□ -0.86
IFT140-205ENST00000561954 LINC00315P59091 139 aa9.65□□□□□ -0.86
IFT140-205ENST00000561954 TTC32Q5I0X7 151 aa9.65□□□□□ -0.86
IFT140-205ENST00000561954 GTSF1LQ9H1H1 148 aa9.65□□□□□ -0.86
IFT140-205ENST00000561954 A0A087WWC5 75 aa9.64□□□□□ -0.87
IFT140-205ENST00000561954 SUMO4Q6EEV6 95 aa9.64□□□□□ -0.87
IFT140-205ENST00000561954 FRZBQ92765 325 aa9.64□□□□□ -0.87
IFT140-205ENST00000561954 DNAJC30Q96LL9 226 aa9.64□□□□□ -0.87
IFT140-205ENST00000561954 TMEM191AQ9H0A3 160 aa9.64□□□□□ -0.87
IFT140-205ENST00000561954 KMT2AQ03164 3969 aa9.64□□□□□ -0.87
IFT140-205ENST00000561954 TRAV8-6A0A0B4J262 113 aa9.63□□□□□ -0.87
IFT140-205ENST00000561954 NDUFA5Q16718 116 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms