RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 PLXNA1Q9UIW2 1896 aa0.2□□□□□ -2.38
CHD9-204ENST00000561869 LAMB1P07942 1786 aa0.2□□□□□ -2.38
CHD9-204ENST00000561869 F5P12259 2224 aa0.2□□□□□ -2.38
CHD9-204ENST00000561869 MYO7AQ13402 2215 aa0.2□□□□□ -2.38
CHD9-204ENST00000561869 M0R2Z0 102 aa0.2□□□□□ -2.38
CHD9-204ENST00000561869 NPFFO15130 113 aa0.2□□□□□ -2.38
CHD9-204ENST00000561869 TFF1P04155 84 aa0.2□□□□□ -2.38
CHD9-204ENST00000561869 CCL3L1P16619 93 aa0.2□□□□□ -2.38
CHD9-204ENST00000561869 NPC2P61916 151 aa0.2□□□□□ -2.38
CHD9-204ENST00000561869 SMCO1Q147U7 214 aa0.2□□□□□ -2.38
CHD9-204ENST00000561869 TMEM141Q96I45 108 aa0.2□□□□□ -2.38
CHD9-204ENST00000561869 DSCR8Q96T75 97 aa0.2□□□□□ -2.38
CHD9-204ENST00000561869 COA4Q9NYJ1 87 aa0.2□□□□□ -2.38
CHD9-204ENST00000561869 NDUFA12Q9UI09 145 aa0.2□□□□□ -2.38
CHD9-204ENST00000561869 VIRMAQ69YN4 1812 aaKnown RBP0.2□□□□□ -2.38
CHD9-204ENST00000561869 KIF13AQ9H1H9 1805 aa0.2□□□□□ -2.38
CHD9-204ENST00000561869 NAV2Q8IVL1 2488 aa0.19□□□□□ -2.38
CHD9-204ENST00000561869 TCRBV3S1A0A5B6 114 aa0.19□□□□□ -2.38
CHD9-204ENST00000561869 ZNF670-ZNF695F2Z2N8 137 aa0.19□□□□□ -2.38
CHD9-204ENST00000561869 J3QR89 54 aa0.19□□□□□ -2.38
CHD9-204ENST00000561869 M0R129 80 aa0.19□□□□□ -2.38
CHD9-204ENST00000561869 RPS25P62851 125 aaKnown RBP0.19□□□□□ -2.38
CHD9-204ENST00000561869 SPANXN1Q5VSR9 72 aa0.19□□□□□ -2.38
CHD9-204ENST00000561869 MIC13Q5XKP0 118 aa0.19□□□□□ -2.38
CHD9-204ENST00000561869 SCIMPQ6UWF3 145 aa0.19□□□□□ -2.38
CHD9-204ENST00000561869 Q6ZUT4 128 aa0.19□□□□□ -2.38
CHD9-204ENST00000561869 TSKUQ8WUA8 353 aa0.19□□□□□ -2.38
CHD9-204ENST00000561869 TPT1P8Q9HAU6 139 aa0.19□□□□□ -2.38
CHD9-204ENST00000561869 PAIP2BQ9ULR5 123 aaKnown RBP0.19□□□□□ -2.38
CHD9-204ENST00000561869 TPRP12270 2363 aaKnown RBP0.19□□□□□ -2.38
CHD9-204ENST00000561869 MYOM3Q5VTT5 1437 aa0.19□□□□□ -2.38
CHD9-204ENST00000561869 RBBP6Q7Z6E9 1792 aaKnown RBP0.19□□□□□ -2.38
CHD9-204ENST00000561869 MYH6P13533 1939 aa0.19□□□□□ -2.38
CHD9-204ENST00000561869 CDK13Q14004 1512 aaKnown RBP0.18□□□□□ -2.38
CHD9-204ENST00000561869 TNCP24821 2201 aa0.18□□□□□ -2.38
CHD9-204ENST00000561869 ABCA12Q86UK0 2595 aa0.18□□□□□ -2.38
CHD9-204ENST00000561869 TRAV12-3A0A0B4J271 114 aa0.18□□□□□ -2.38
CHD9-204ENST00000561869 RBAKDNA6NC62 111 aa0.18□□□□□ -2.38
CHD9-204ENST00000561869 PIRTP0C851 137 aa0.18□□□□□ -2.38
CHD9-204ENST00000561869 COX4I1P13073 169 aa0.18□□□□□ -2.38
CHD9-204ENST00000561869 S100A12P80511 92 aa0.18□□□□□ -2.38
CHD9-204ENST00000561869 SSBP1Q04837 148 aaKnown RBP0.18□□□□□ -2.38
CHD9-204ENST00000561869 SPCS2Q15005 226 aa0.18□□□□□ -2.38
CHD9-204ENST00000561869 SLC48A1Q6P1K1 146 aa0.18□□□□□ -2.38
CHD9-204ENST00000561869 CYP2G1PQ6ZSU1 146 aa0.18□□□□□ -2.38
CHD9-204ENST00000561869 TSTD1Q8NFU3 115 aa0.18□□□□□ -2.38
CHD9-204ENST00000561869 SDF2Q99470 211 aa0.18□□□□□ -2.38
CHD9-204ENST00000561869 MUC22E2RYF6 1773 aaPredicted RBP0.18□□□□□ -2.38
CHD9-204ENST00000561869 BICRAQ9NZM4 1560 aa0.18□□□□□ -2.38
CHD9-204ENST00000561869 CADP27708 2225 aa0.18□□□□□ -2.38
CHD9-204ENST00000561869 PHIPQ8WWQ0 1821 aa0.17□□□□□ -2.38
CHD9-204ENST00000561869 POLQO75417 2590 aa0.17□□□□□ -2.38
CHD9-204ENST00000561869 KDM6BO15054 1643 aa0.17□□□□□ -2.38
CHD9-204ENST00000561869 ANKHD1Q8IWZ3 2542 aaKnown RBP0.17□□□□□ -2.38
CHD9-204ENST00000561869 GVQW2A0A096LPI5 108 aaPredicted RBP0.17□□□□□ -2.38
CHD9-204ENST00000561869 K7ERU9 68 aa0.17□□□□□ -2.38
CHD9-204ENST00000561869 DAPK1P53355 1430 aa0.17□□□□□ -2.38
CHD9-204ENST00000561869 COPZ1P61923 177 aa0.17□□□□□ -2.38
CHD9-204ENST00000561869 RRAS2P62070 204 aaPredicted RBP0.17□□□□□ -2.38
CHD9-204ENST00000561869 C9orf116Q5BN46 136 aaPredicted RBP0.17□□□□□ -2.38
CHD9-204ENST00000561869 TCEAL4Q96EI5 215 aa0.17□□□□□ -2.38
CHD9-204ENST00000561869 PFDN5Q99471 154 aa0.17□□□□□ -2.38
CHD9-204ENST00000561869 BPESC1Q9GZL8 116 aa0.17□□□□□ -2.38
CHD9-204ENST00000561869 TMEM191AQ9H0A3 160 aa0.17□□□□□ -2.38
CHD9-204ENST00000561869 GRIN2AQ12879 1464 aa0.16□□□□□ -2.38
CHD9-204ENST00000561869 TNS1Q9HBL0 1735 aaKnown RBP0.16□□□□□ -2.38
CHD9-204ENST00000561869 NRXN2Q9P2S2 1712 aa0.16□□□□□ -2.38
CHD9-204ENST00000561869 SSC5DA1L4H1 1573 aa0.16□□□□□ -2.38
CHD9-204ENST00000561869 SOGA1O94964 1423 aa0.16□□□□□ -2.38
CHD9-204ENST00000561869 CLPSL1A2RUU4 121 aa0.16□□□□□ -2.38
CHD9-204ENST00000561869 GUCA1AP43080 201 aaPredicted RBP0.16□□□□□ -2.38
CHD9-204ENST00000561869 UBE2D1P51668 147 aa0.16□□□□□ -2.38
CHD9-204ENST00000561869 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.16□□□□□ -2.38
CHD9-204ENST00000561869 VMO1Q7Z5L0 202 aa0.16□□□□□ -2.38
CHD9-204ENST00000561869 C4orf33Q8N1A6 199 aa0.16□□□□□ -2.38
CHD9-204ENST00000561869 C20orf197Q8N268 126 aa0.16□□□□□ -2.38
CHD9-204ENST00000561869 COX7B2Q8TF08 81 aa0.16□□□□□ -2.38
CHD9-204ENST00000561869 Q96NJ1 140 aa0.16□□□□□ -2.38
CHD9-204ENST00000561869 PROK2Q9HC23 129 aa0.16□□□□□ -2.38
CHD9-204ENST00000561869 CCDC167Q9P0B6 97 aa0.16□□□□□ -2.38
CHD9-204ENST00000561869 SYNE1Q8NF91 8797 aaKnown RBP0.16□□□□□ -2.38
CHD9-204ENST00000561869 F8P00451 2351 aa0.16□□□□□ -2.38
CHD9-204ENST00000561869 LRP1Q07954 4544 aaKnown RBP0.15□□□□□ -2.38
CHD9-204ENST00000561869 SSPOA2VEC9 5147 aa0.15□□□□□ -2.39
CHD9-204ENST00000561869 ZFYVE26Q68DK2 2539 aa0.15□□□□□ -2.39
CHD9-204ENST00000561869 FAT4Q6V0I7 4981 aa0.15□□□□□ -2.39
CHD9-204ENST00000561869 MUC2Q02817 5179 aa0.15□□□□□ -2.39
CHD9-204ENST00000561869 NDUFA2O43678 99 aa0.15□□□□□ -2.39
CHD9-204ENST00000561869 IFNA17P01571 189 aa0.15□□□□□ -2.39
CHD9-204ENST00000561869 ARPC4P59998 168 aa0.15□□□□□ -2.39
CHD9-204ENST00000561869 FAM74A4Q5TZK3 123 aa0.15□□□□□ -2.39
CHD9-204ENST00000561869 SPINK6Q6UWN8 80 aa0.15□□□□□ -2.39
CHD9-204ENST00000561869 SMIM11BQ8TCY0 68 aa0.15□□□□□ -2.39
CHD9-204ENST00000561869 C10orf82Q8WW14 230 aa0.15□□□□□ -2.39
CHD9-204ENST00000561869 DPH3Q96FX2 82 aa0.15□□□□□ -2.39
CHD9-204ENST00000561869 PSMG3Q9BT73 122 aaPredicted RBP0.15□□□□□ -2.39
CHD9-204ENST00000561869 PRR15LQ9BU68 103 aa0.15□□□□□ -2.39
CHD9-204ENST00000561869 TMEM242Q9NWH2 141 aa0.15□□□□□ -2.39
CHD9-204ENST00000561869 IBTKQ9P2D0 1353 aaPredicted RBP0.15□□□□□ -2.39
CHD9-204ENST00000561869 LAMC3Q9Y6N6 1575 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms