RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 IGLV1-51P01701 117 aa4.8□□□□□ -1.64
CAPN3-210ENST00000561817 GPX1P07203 203 aa4.8□□□□□ -1.64
CAPN3-210ENST00000561817 RBMY1A1P0DJD3 496 aaKnown RBP4.8□□□□□ -1.64
CAPN3-210ENST00000561817 RBMY1CP0DJD4 496 aa4.8□□□□□ -1.64
CAPN3-210ENST00000561817 RNASE3P12724 160 aaKnown RBP4.8□□□□□ -1.64
CAPN3-210ENST00000561817 NTF3P20783 257 aa4.8□□□□□ -1.64
CAPN3-210ENST00000561817 G0S2P27469 103 aa4.8□□□□□ -1.64
CAPN3-210ENST00000561817 AKR1D1P51857 326 aa4.8□□□□□ -1.64
CAPN3-210ENST00000561817 RBMY1FQ15415 496 aaKnown RBP4.8□□□□□ -1.64
CAPN3-210ENST00000561817 MRPL23Q16540 153 aaKnown RBP4.8□□□□□ -1.64
CAPN3-210ENST00000561817 IQCJQ1A5X6 159 aa4.8□□□□□ -1.64
CAPN3-210ENST00000561817 BEAN1Q3B7T3 259 aa4.8□□□□□ -1.64
CAPN3-210ENST00000561817 NSUN5P1Q3KNT7 163 aa4.8□□□□□ -1.64
CAPN3-210ENST00000561817 EBLN2Q6P2I7 272 aa4.8□□□□□ -1.64
CAPN3-210ENST00000561817 LINC00482Q8N8I6 264 aa4.8□□□□□ -1.64
CAPN3-210ENST00000561817 SYT8Q8NBV8 401 aa4.8□□□□□ -1.64
CAPN3-210ENST00000561817 OR10AG1Q8NH19 301 aa4.8□□□□□ -1.64
CAPN3-210ENST00000561817 DYNLRB2Q8TF09 96 aa4.8□□□□□ -1.64
CAPN3-210ENST00000561817 PACRGQ96M98 296 aaPredicted RBP4.8□□□□□ -1.64
CAPN3-210ENST00000561817 TMEM191AQ9H0A3 160 aa4.8□□□□□ -1.64
CAPN3-210ENST00000561817 ATRQ13535 2644 aa4.79□□□□□ -1.64
CAPN3-210ENST00000561817 OR4C46A6NHA9 309 aa4.79□□□□□ -1.64
CAPN3-210ENST00000561817 M0R2Z0 102 aa4.79□□□□□ -1.64
CAPN3-210ENST00000561817 SIVA1O15304 175 aa4.79□□□□□ -1.64
CAPN3-210ENST00000561817 GNRH2O43555 120 aa4.79□□□□□ -1.64
CAPN3-210ENST00000561817 SMIM6P0DI80 62 aa4.79□□□□□ -1.64
CAPN3-210ENST00000561817 FABP4P15090 132 aa4.79□□□□□ -1.64
CAPN3-210ENST00000561817 KRTAP21-3Q3LHN1 58 aa4.79□□□□□ -1.64
CAPN3-210ENST00000561817 MRPL51Q4U2R6 128 aaKnown RBP4.79□□□□□ -1.64
CAPN3-210ENST00000561817 PYY3Q5JQD4 70 aa4.79□□□□□ -1.64
CAPN3-210ENST00000561817 AMN1Q8IY45 258 aa4.79□□□□□ -1.64
CAPN3-210ENST00000561817 OR10D4PQ8NGN7 298 aa4.79□□□□□ -1.64
CAPN3-210ENST00000561817 OR2K2Q8NGT1 345 aa4.79□□□□□ -1.64
CAPN3-210ENST00000561817 SPATA3Q8NHX4 192 aa4.79□□□□□ -1.64
CAPN3-210ENST00000561817 RNF183Q96D59 192 aa4.79□□□□□ -1.64
CAPN3-210ENST00000561817 MCRIP2Q9BUT9 160 aaKnown RBP4.79□□□□□ -1.64
CAPN3-210ENST00000561817 DNAH3Q8TD57 4116 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 FBN1P35555 2871 aaKnown RBP4.78□□□□□ -1.64
CAPN3-210ENST00000561817 TRAV12-2A0A075B6T6 113 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 TRAV12-3A0A0B4J271 114 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 IGHV3-16A0A0C4DH30 117 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 F5H697 171 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 H3BVH4 76 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 GAS8-AS1O95177 125 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 IGKV3-20P01619 116 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 TSPOP30536 169 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 CACNG7P62955 275 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 TWIST1Q15672 202 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 SPINK13Q1W4C9 94 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 Q6ZWC4 215 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 NIT1Q86X76 327 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 BAGE3Q86Y29 109 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 POM121L12Q8N7R1 296 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 BORCS7Q96B45 105 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 KCNS1Q96KK3 526 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 C9orf85Q96MD7 179 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 NDUFAF3Q9BU61 184 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 KIF25-AS1Q9Y6Z4 181 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 TRRAPQ9Y4A5 3859 aa4.78□□□□□ -1.64
CAPN3-210ENST00000561817 IGHV1OR15-1A0A075B7D0 117 aa4.77□□□□□ -1.65
CAPN3-210ENST00000561817 D6R8Y8 96 aa4.77□□□□□ -1.65
CAPN3-210ENST00000561817 PRYO14603 147 aa4.77□□□□□ -1.65
CAPN3-210ENST00000561817 TRIAP1O43715 76 aa4.77□□□□□ -1.65
CAPN3-210ENST00000561817 GIG44P09565 113 aaPredicted RBP4.77□□□□□ -1.65
CAPN3-210ENST00000561817 EVI2AP22794 236 aa4.77□□□□□ -1.65
CAPN3-210ENST00000561817 S100A2P29034 98 aa4.77□□□□□ -1.65
CAPN3-210ENST00000561817 ASIPP42127 132 aa4.77□□□□□ -1.65
CAPN3-210ENST00000561817 LINC00315P59091 139 aa4.77□□□□□ -1.65
CAPN3-210ENST00000561817 JOSD1Q15040 202 aaPredicted RBP4.77□□□□□ -1.65
CAPN3-210ENST00000561817 TRPT1Q86TN4 253 aaKnown RBP4.77□□□□□ -1.65
CAPN3-210ENST00000561817 BOD1L2Q8IYS8 172 aa4.77□□□□□ -1.65
CAPN3-210ENST00000561817 DEFB125Q8N687 156 aa4.77□□□□□ -1.65
CAPN3-210ENST00000561817 TMEM18Q96B42 140 aa4.77□□□□□ -1.65
CAPN3-210ENST00000561817 C12orf57Q99622 126 aa4.77□□□□□ -1.65
CAPN3-210ENST00000561817 LINC00467Q9BRT7 94 aa4.77□□□□□ -1.65
CAPN3-210ENST00000561817 ZNF747Q9BV97 191 aa4.77□□□□□ -1.65
CAPN3-210ENST00000561817 MAP1LC3CQ9BXW4 147 aa4.77□□□□□ -1.65
CAPN3-210ENST00000561817 LINC01546A6NGU7 62 aa4.76□□□□□ -1.65
CAPN3-210ENST00000561817 COL6A5A8TX70 2615 aa4.76□□□□□ -1.65
CAPN3-210ENST00000561817 TMEM238C9JI98 176 aa4.76□□□□□ -1.65
CAPN3-210ENST00000561817 SMKR1H3BMG3 65 aa4.76□□□□□ -1.65
CAPN3-210ENST00000561817 NPYP01303 97 aa4.76□□□□□ -1.65
CAPN3-210ENST00000561817 FXYD7P58549 80 aa4.76□□□□□ -1.65
CAPN3-210ENST00000561817 UBE2V1Q13404 147 aa4.76□□□□□ -1.65
CAPN3-210ENST00000561817 ORMDL3Q8N138 153 aa4.76□□□□□ -1.65
CAPN3-210ENST00000561817 NRACQ8N912 160 aa4.76□□□□□ -1.65
CAPN3-210ENST00000561817 Q8N976 141 aa4.76□□□□□ -1.65
CAPN3-210ENST00000561817 CHCHD1Q96BP2 118 aaKnown RBP4.76□□□□□ -1.65
CAPN3-210ENST00000561817 PRELID3AQ96N28 172 aa4.76□□□□□ -1.65
CAPN3-210ENST00000561817 GSN-AS1Q9NRJ2 163 aa4.76□□□□□ -1.65
CAPN3-210ENST00000561817 MDFICQ9P1T7 246 aa4.76□□□□□ -1.65
CAPN3-210ENST00000561817 STAB1Q9NY15 2570 aa4.76□□□□□ -1.65
CAPN3-210ENST00000561817 IGLV2-18A0A075B6J9 118 aa4.75□□□□□ -1.65
CAPN3-210ENST00000561817 A0A096LNJ9 63 aa4.75□□□□□ -1.65
CAPN3-210ENST00000561817 OR11H12B2RN74 326 aa4.75□□□□□ -1.65
CAPN3-210ENST00000561817 NCR2O95944 276 aa4.75□□□□□ -1.65
CAPN3-210ENST00000561817 PPBPP02775 128 aa4.75□□□□□ -1.65
CAPN3-210ENST00000561817 PLA2G1BP04054 148 aaKnown RBP4.75□□□□□ -1.65
CAPN3-210ENST00000561817 CD7P09564 240 aa4.75□□□□□ -1.65
CAPN3-210ENST00000561817 LINC00614P0C842 121 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms