RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 SSBP4Q9BWG4 385 aaPredicted RBP10.48□□□□□ -0.73
CCDC113-203ENST00000561517 Q9UF83 564 aa10.48□□□□□ -0.73
CCDC113-203ENST00000561517 TNFRSF18Q9Y5U5 241 aa10.48□□□□□ -0.73
CCDC113-203ENST00000561517 TRAV8-6A0A0B4J262 113 aa10.47□□□□□ -0.73
CCDC113-203ENST00000561517 PDE6DO43924 150 aa10.47□□□□□ -0.73
CCDC113-203ENST00000561517 CENPWQ5EE01 88 aa10.47□□□□□ -0.73
CCDC113-203ENST00000561517 LINC01556Q5JQF7 62 aa10.47□□□□□ -0.73
CCDC113-203ENST00000561517 PRR27Q6MZM9 219 aa10.47□□□□□ -0.73
CCDC113-203ENST00000561517 SMIM12Q96EX1 92 aa10.47□□□□□ -0.73
CCDC113-203ENST00000561517 MSRB1Q9NZV6 116 aa10.47□□□□□ -0.73
CCDC113-203ENST00000561517 A0A087WWL8 130 aa10.46□□□□□ -0.73
CCDC113-203ENST00000561517 GAGE12JA6NER3 117 aa10.46□□□□□ -0.73
CCDC113-203ENST00000561517 C16orf90A8MZG2 172 aa10.46□□□□□ -0.73
CCDC113-203ENST00000561517 OR5AL1P0C617 328 aa10.46□□□□□ -0.73
CCDC113-203ENST00000561517 TAGLN2P37802 199 aaKnown RBP10.46□□□□□ -0.73
CCDC113-203ENST00000561517 GAGE1Q13065 139 aa10.46□□□□□ -0.73
CCDC113-203ENST00000561517 GAGE4Q13068 117 aa10.46□□□□□ -0.73
CCDC113-203ENST00000561517 GAGE5Q13069 117 aa10.46□□□□□ -0.73
CCDC113-203ENST00000561517 GAGE13Q4V321 117 aa10.46□□□□□ -0.73
CCDC113-203ENST00000561517 OR10J3Q5JRS4 329 aa10.46□□□□□ -0.73
CCDC113-203ENST00000561517 FAM74A4Q5TZK3 123 aa10.46□□□□□ -0.73
CCDC113-203ENST00000561517 SPATA12Q7Z6I5 190 aa10.46□□□□□ -0.73
CCDC113-203ENST00000561517 OR10AG1Q8NH19 301 aa10.46□□□□□ -0.73
CCDC113-203ENST00000561517 VAX2Q9UIW0 290 aa10.46□□□□□ -0.73
CCDC113-203ENST00000561517 RAB19A4D1S5 217 aa10.45□□□□□ -0.74
CCDC113-203ENST00000561517 TRBV20OR9-2A0A075B6H5 130 aa10.44□□□□□ -0.74
CCDC113-203ENST00000561517 C19orf71A6NCJ1 209 aa10.44□□□□□ -0.74
CCDC113-203ENST00000561517 GNG4P50150 75 aa10.44□□□□□ -0.74
CCDC113-203ENST00000561517 MED9Q9NWA0 146 aa10.44□□□□□ -0.74
CCDC113-203ENST00000561517 TRBV10-1A0A0K0K1A3 114 aa10.43□□□□□ -0.74
CCDC113-203ENST00000561517 A0A1B0GVG6 124 aa10.43□□□□□ -0.74
CCDC113-203ENST00000561517 KRTAP10-2P60368 255 aa10.43□□□□□ -0.74
CCDC113-203ENST00000561517 BLOC1S1P78537 153 aa10.43□□□□□ -0.74
CCDC113-203ENST00000561517 ALKAL2Q6UX46 152 aa10.43□□□□□ -0.74
CCDC113-203ENST00000561517 IBA57-AS1B1ANH7 110 aa10.42□□□□□ -0.74
CCDC113-203ENST00000561517 SPANXN1Q5VSR9 72 aa10.42□□□□□ -0.74
CCDC113-203ENST00000561517 LYPD6BQ8NI32 183 aa10.42□□□□□ -0.74
CCDC113-203ENST00000561517 DAZAP1Q96EP5 407 aaKnown RBP10.42□□□□□ -0.74
CCDC113-203ENST00000561517 RYR1P21817 5038 aa10.41□□□□□ -0.74
CCDC113-203ENST00000561517 A0A087WWC5 75 aa10.41□□□□□ -0.74
CCDC113-203ENST00000561517 IGLC6P0CF74 106 aa10.41□□□□□ -0.74
CCDC113-203ENST00000561517 ERVFC1-1P60608 527 aa10.41□□□□□ -0.74
CCDC113-203ENST00000561517 RPS20P60866 119 aaKnown RBP10.41□□□□□ -0.74
CCDC113-203ENST00000561517 RAB4BP61018 213 aa10.41□□□□□ -0.74
CCDC113-203ENST00000561517 OR2D3Q8NGH3 330 aa10.41□□□□□ -0.74
CCDC113-203ENST00000561517 BIN3Q9NQY0 253 aa10.41□□□□□ -0.74
CCDC113-203ENST00000561517 LRP1BQ9NZR2 4599 aa10.4□□□□□ -0.74
CCDC113-203ENST00000561517 MUC21A0A0G2JKD1 596 aa10.4□□□□□ -0.74
CCDC113-203ENST00000561517 MUC21A0A140T8X8 626 aa10.4□□□□□ -0.74
CCDC113-203ENST00000561517 IGHV3-30P01768 117 aa10.4□□□□□ -0.74
CCDC113-203ENST00000561517 IGHV3-33P01772 117 aa10.4□□□□□ -0.74
CCDC113-203ENST00000561517 IGHV3-30-3P0DP02 117 aa10.4□□□□□ -0.74
CCDC113-203ENST00000561517 IGHV3-30-5P0DP03 117 aa10.4□□□□□ -0.74
CCDC113-203ENST00000561517 NKX2-5P52952 324 aaPredicted RBP10.4□□□□□ -0.74
CCDC113-203ENST00000561517 OR10G8Q8NGN5 311 aa10.4□□□□□ -0.74
CCDC113-203ENST00000561517 TRBV7-3A0A075B6L6 115 aa10.39□□□□□ -0.75
CCDC113-203ENST00000561517 A0A087WTM6 91 aa10.39□□□□□ -0.75
CCDC113-203ENST00000561517 EREGO14944 169 aa10.39□□□□□ -0.75
CCDC113-203ENST00000561517 CDK2AP2O75956 126 aa10.39□□□□□ -0.75
CCDC113-203ENST00000561517 GZMBP10144 247 aa10.39□□□□□ -0.75
CCDC113-203ENST00000561517 UBE2D3P61077 147 aa10.39□□□□□ -0.75
CCDC113-203ENST00000561517 UBE2D2P62837 147 aa10.39□□□□□ -0.75
CCDC113-203ENST00000561517 RPL36AP83881 106 aaKnown RBP10.39□□□□□ -0.75
CCDC113-203ENST00000561517 LAGE3Q14657 143 aa10.39□□□□□ -0.75
CCDC113-203ENST00000561517 FER1L6-AS1Q8NA97 138 aa10.39□□□□□ -0.75
CCDC113-203ENST00000561517 RPL36ALQ969Q0 106 aaKnown RBP10.39□□□□□ -0.75
CCDC113-203ENST00000561517 KIF25-AS1Q9Y6Z4 181 aa10.39□□□□□ -0.75
CCDC113-203ENST00000561517 XKRY2A2RUG3 117 aa10.38□□□□□ -0.75
CCDC113-203ENST00000561517 RBFOX3A6NFN3 312 aa10.38□□□□□ -0.75
CCDC113-203ENST00000561517 TMEM250H0YL14 139 aa10.38□□□□□ -0.75
CCDC113-203ENST00000561517 P01737 135 aa10.38□□□□□ -0.75
CCDC113-203ENST00000561517 ZNF56Q15929 161 aa10.38□□□□□ -0.75
CCDC113-203ENST00000561517 PGPEP1Q9NXJ5 209 aa10.38□□□□□ -0.75
CCDC113-203ENST00000561517 Q8N3U1 123 aa10.37□□□□□ -0.75
CCDC113-203ENST00000561517 NEXN-AS1Q8NBZ9 246 aa10.37□□□□□ -0.75
CCDC113-203ENST00000561517 NUDT10Q8NFP7 164 aa10.37□□□□□ -0.75
CCDC113-203ENST00000561517 NUDT11Q96G61 164 aa10.37□□□□□ -0.75
CCDC113-203ENST00000561517 AP1S3Q96PC3 154 aa10.37□□□□□ -0.75
CCDC113-203ENST00000561517 F2Z2F3 143 aa10.36□□□□□ -0.75
CCDC113-203ENST00000561517 SSTP61278 116 aa10.36□□□□□ -0.75
CCDC113-203ENST00000561517 CACNG7P62955 275 aa10.36□□□□□ -0.75
CCDC113-203ENST00000561517 CDPF1Q6NVV7 123 aa10.36□□□□□ -0.75
CCDC113-203ENST00000561517 OCC1Q8TAD7 63 aa10.36□□□□□ -0.75
CCDC113-203ENST00000561517 DNAH5Q8TE73 4624 aa10.36□□□□□ -0.75
CCDC113-203ENST00000561517 K7EN84 100 aa10.35□□□□□ -0.75
CCDC113-203ENST00000561517 SMIM17P0DL12 118 aa10.35□□□□□ -0.75
CCDC113-203ENST00000561517 NIT1Q86X76 327 aa10.35□□□□□ -0.75
CCDC113-203ENST00000561517 TPPP3Q9BW30 176 aa10.35□□□□□ -0.75
CCDC113-203ENST00000561517 Q9HAA7 133 aa10.35□□□□□ -0.75
CCDC113-203ENST00000561517 LRCOL1A6NCL2 159 aa10.34□□□□□ -0.75
CCDC113-203ENST00000561517 F5H697 171 aa10.34□□□□□ -0.75
CCDC113-203ENST00000561517 NDUFS6O75380 124 aaKnown RBP10.34□□□□□ -0.75
CCDC113-203ENST00000561517 WDR73Q6P4I2 378 aa10.34□□□□□ -0.75
CCDC113-203ENST00000561517 LYZL1Q6UWQ5 148 aa10.34□□□□□ -0.75
CCDC113-203ENST00000561517 DAZ4Q86SG3 579 aaKnown RBP10.34□□□□□ -0.75
CCDC113-203ENST00000561517 DAZ3Q9NR90 486 aaKnown RBP10.34□□□□□ -0.75
CCDC113-203ENST00000561517 HSPG2P98160 4391 aa10.33□□□□□ -0.76
CCDC113-203ENST00000561517 TRAV8-3A0A0A6YYJ7 113 aa10.33□□□□□ -0.76
CCDC113-203ENST00000561517 PSCAO43653 123 aa10.33□□□□□ -0.76
CCDC113-203ENST00000561517 TOR2AQ5JU69 321 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms