RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 TIMM8BQ9Y5J9 83 aaPredicted RBP5.49□□□□□ -1.53
TPM1-231ENST00000561395 MUC4Q99102 2169 aa5.48□□□□□ -1.53
TPM1-231ENST00000561395 M0R381 172 aa5.48□□□□□ -1.53
TPM1-231ENST00000561395 ESDP10768 282 aa5.48□□□□□ -1.53
TPM1-231ENST00000561395 S100A2P29034 98 aa5.48□□□□□ -1.53
TPM1-231ENST00000561395 NUTF2P61970 127 aaKnown RBP5.48□□□□□ -1.53
TPM1-231ENST00000561395 IQCJQ1A5X6 159 aa5.48□□□□□ -1.53
TPM1-231ENST00000561395 MRPL51Q4U2R6 128 aaKnown RBP5.48□□□□□ -1.53
TPM1-231ENST00000561395 SMIM15Q7Z3B0 74 aa5.48□□□□□ -1.53
TPM1-231ENST00000561395 BAGE3Q86Y29 109 aa5.48□□□□□ -1.53
TPM1-231ENST00000561395 Q8N1Y9 231 aa5.48□□□□□ -1.53
TPM1-231ENST00000561395 RNF185Q96GF1 192 aa5.48□□□□□ -1.53
TPM1-231ENST00000561395 STARD9Q9P2P6 4700 aa5.48□□□□□ -1.53
TPM1-231ENST00000561395 CBY3A6NI87 242 aa5.47□□□□□ -1.53
TPM1-231ENST00000561395 D6R8Y8 96 aa5.47□□□□□ -1.53
TPM1-231ENST00000561395 SPRY2O43597 315 aa5.47□□□□□ -1.53
TPM1-231ENST00000561395 NUPR1O60356 82 aa5.47□□□□□ -1.53
TPM1-231ENST00000561395 SERF1AO75920 110 aa5.47□□□□□ -1.53
TPM1-231ENST00000561395 RAB4AP20338 218 aa5.47□□□□□ -1.53
TPM1-231ENST00000561395 EVI2AP22794 236 aa5.47□□□□□ -1.53
TPM1-231ENST00000561395 AKR1D1P51857 326 aa5.47□□□□□ -1.53
TPM1-231ENST00000561395 GTSCR1Q86UQ5 136 aa5.47□□□□□ -1.53
TPM1-231ENST00000561395 ORMDL3Q8N138 153 aa5.47□□□□□ -1.53
TPM1-231ENST00000561395 AP1S3Q96PC3 154 aa5.47□□□□□ -1.53
TPM1-231ENST00000561395 RCHY1Q96PM5 261 aa5.47□□□□□ -1.53
TPM1-231ENST00000561395 HIST1H2BLQ99880 126 aa5.47□□□□□ -1.53
TPM1-231ENST00000561395 MDFICQ9P1T7 246 aa5.47□□□□□ -1.53
TPM1-231ENST00000561395 XCL2Q9UBD3 114 aa5.47□□□□□ -1.53
TPM1-231ENST00000561395 FRAS1Q86XX4 4008 aa5.46□□□□□ -1.54
TPM1-231ENST00000561395 NCR2O95944 276 aa5.46□□□□□ -1.54
TPM1-231ENST00000561395 PPBPP02775 128 aa5.46□□□□□ -1.54
TPM1-231ENST00000561395 GIG44P09565 113 aaPredicted RBP5.46□□□□□ -1.54
TPM1-231ENST00000561395 FABP4P15090 132 aa5.46□□□□□ -1.54
TPM1-231ENST00000561395 C1orf158Q8N1D5 194 aa5.46□□□□□ -1.54
TPM1-231ENST00000561395 DEFB125Q8N687 156 aa5.46□□□□□ -1.54
TPM1-231ENST00000561395 IL17DQ8TAD2 202 aa5.46□□□□□ -1.54
TPM1-231ENST00000561395 PRELID3AQ96N28 172 aa5.46□□□□□ -1.54
TPM1-231ENST00000561395 HUWE1Q7Z6Z7 4374 aaKnown RBP5.46□□□□□ -1.54
TPM1-231ENST00000561395 SMKR1H3BMG3 65 aa5.45□□□□□ -1.54
TPM1-231ENST00000561395 RPL35AP18077 110 aaKnown RBP5.45□□□□□ -1.54
TPM1-231ENST00000561395 CKS2P33552 79 aa5.45□□□□□ -1.54
TPM1-231ENST00000561395 ZNF415Q09FC8 603 aa5.45□□□□□ -1.54
TPM1-231ENST00000561395 ZFAND6Q6FIF0 208 aa5.45□□□□□ -1.54
TPM1-231ENST00000561395 CDPF1Q6NVV7 123 aa5.45□□□□□ -1.54
TPM1-231ENST00000561395 MORN3Q6PF18 240 aaPredicted RBP5.45□□□□□ -1.54
TPM1-231ENST00000561395 SYT8Q8NBV8 401 aa5.45□□□□□ -1.54
TPM1-231ENST00000561395 TMEM18Q96B42 140 aa5.45□□□□□ -1.54
TPM1-231ENST00000561395 URB1-AS1Q96HZ7 61 aa5.45□□□□□ -1.54
TPM1-231ENST00000561395 PACRGQ96M98 296 aaPredicted RBP5.45□□□□□ -1.54
TPM1-231ENST00000561395 LINC01587Q99440 93 aa5.45□□□□□ -1.54
TPM1-231ENST00000561395 DPH3P1Q9H4G8 78 aa5.45□□□□□ -1.54
TPM1-231ENST00000561395 LAMTOR2Q9Y2Q5 125 aa5.45□□□□□ -1.54
TPM1-231ENST00000561395 KIF25-AS1Q9Y6Z4 181 aa5.45□□□□□ -1.54
TPM1-231ENST00000561395 HERC2O95714 4834 aa5.45□□□□□ -1.54
TPM1-231ENST00000561395 GAS8-AS1O95177 125 aa5.44□□□□□ -1.54
TPM1-231ENST00000561395 HTN1P15515 57 aa5.44□□□□□ -1.54
TPM1-231ENST00000561395 RNASEKQ6P5S7 137 aaKnown RBP5.44□□□□□ -1.54
TPM1-231ENST00000561395 NIT1Q86X76 327 aa5.44□□□□□ -1.54
TPM1-231ENST00000561395 C14orf178Q8N769 122 aaPredicted RBP5.44□□□□□ -1.54
TPM1-231ENST00000561395 POM121L12Q8N7R1 296 aa5.44□□□□□ -1.54
TPM1-231ENST00000561395 C11orf72Q8NBR9 251 aa5.44□□□□□ -1.54
TPM1-231ENST00000561395 OR10D4PQ8NGN7 298 aa5.44□□□□□ -1.54
TPM1-231ENST00000561395 PTH2Q96A98 100 aa5.44□□□□□ -1.54
TPM1-231ENST00000561395 CHCHD1Q96BP2 118 aaKnown RBP5.44□□□□□ -1.54
TPM1-231ENST00000561395 MRAP2Q96G30 205 aa5.44□□□□□ -1.54
TPM1-231ENST00000561395 TMEM208Q9BTX3 173 aa5.44□□□□□ -1.54
TPM1-231ENST00000561395 C1QTNF4Q9BXJ3 329 aa5.44□□□□□ -1.54
TPM1-231ENST00000561395 SAMD10Q9BYL1 202 aa5.44□□□□□ -1.54
TPM1-231ENST00000561395 GSN-AS1Q9NRJ2 163 aa5.44□□□□□ -1.54
TPM1-231ENST00000561395 GOLT1BQ9Y3E0 138 aa5.44□□□□□ -1.54
TPM1-231ENST00000561395 TRAV26-2A0A0B4J265 109 aa5.43□□□□□ -1.54
TPM1-231ENST00000561395 TNFRSF6BO95407 300 aa5.43□□□□□ -1.54
TPM1-231ENST00000561395 NPYP01303 97 aa5.43□□□□□ -1.54
TPM1-231ENST00000561395 PRM2P04554 102 aa5.43□□□□□ -1.54
TPM1-231ENST00000561395 MGPP08493 103 aa5.43□□□□□ -1.54
TPM1-231ENST00000561395 SMIM6P0DI80 62 aa5.43□□□□□ -1.54
TPM1-231ENST00000561395 SMIM17P0DL12 118 aa5.43□□□□□ -1.54
TPM1-231ENST00000561395 GATA1P15976 413 aaPredicted RBP5.43□□□□□ -1.54
TPM1-231ENST00000561395 PMCHP20382 165 aa5.43□□□□□ -1.54
TPM1-231ENST00000561395 LINC00315P59091 139 aa5.43□□□□□ -1.54
TPM1-231ENST00000561395 ODF1Q14990 250 aa5.43□□□□□ -1.54
TPM1-231ENST00000561395 ZNF876PQ49A33 203 aa5.43□□□□□ -1.54
TPM1-231ENST00000561395 PIK3CD-AS1Q5SR53 167 aa5.43□□□□□ -1.54
TPM1-231ENST00000561395 NRACQ8N912 160 aa5.43□□□□□ -1.54
TPM1-231ENST00000561395 CSNK1G2-AS1Q8NCQ2 148 aa5.43□□□□□ -1.54
TPM1-231ENST00000561395 SPXQ9BT56 116 aa5.43□□□□□ -1.54
TPM1-231ENST00000561395 JPT2Q9H910 190 aa5.43□□□□□ -1.54
TPM1-231ENST00000561395 RYR1P21817 5038 aa5.42□□□□□ -1.54
TPM1-231ENST00000561395 IGHV3OR16-12A0A075B7B8 117 aa5.42□□□□□ -1.54
TPM1-231ENST00000561395 A0A087WWL8 130 aa5.42□□□□□ -1.54
TPM1-231ENST00000561395 M0R2P5 195 aa5.42□□□□□ -1.54
TPM1-231ENST00000561395 HSBP1O75506 76 aa5.42□□□□□ -1.54
TPM1-231ENST00000561395 LINC00614P0C842 121 aa5.42□□□□□ -1.54
TPM1-231ENST00000561395 AZU1P20160 251 aa5.42□□□□□ -1.54
TPM1-231ENST00000561395 IFI27P40305 119 aaPredicted RBP5.42□□□□□ -1.54
TPM1-231ENST00000561395 AMTP48728 403 aa5.42□□□□□ -1.54
TPM1-231ENST00000561395 ZNF705AQ6ZN79 300 aaPredicted RBP5.42□□□□□ -1.54
TPM1-231ENST00000561395 FA2HQ7L5A8 372 aa5.42□□□□□ -1.54
TPM1-231ENST00000561395 LINC00518Q8N0U6 118 aa5.42□□□□□ -1.54
TPM1-231ENST00000561395 RNASE8Q8TDE3 154 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms