RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 Q8N377 158 aa4.19□□□□□ -1.74
LRRC28-220ENST00000561253 C11orf72Q8NBR9 251 aa4.19□□□□□ -1.74
LRRC28-220ENST00000561253 CMTM2Q8TAZ6 248 aa4.19□□□□□ -1.74
LRRC28-220ENST00000561253 TXNDC17Q9BRA2 123 aa4.19□□□□□ -1.74
LRRC28-220ENST00000561253 DERL1Q9BUN8 251 aa4.19□□□□□ -1.74
LRRC28-220ENST00000561253 JPT2Q9H910 190 aa4.19□□□□□ -1.74
LRRC28-220ENST00000561253 MUC4Q99102 2169 aa4.19□□□□□ -1.74
LRRC28-220ENST00000561253 DNAH17Q9UFH2 4485 aa4.19□□□□□ -1.74
LRRC28-220ENST00000561253 TRAV12-3A0A0B4J271 114 aa4.18□□□□□ -1.74
LRRC28-220ENST00000561253 FBLL1A6NHQ2 334 aaKnown RBP4.18□□□□□ -1.74
LRRC28-220ENST00000561253 ZNF705GA8MUZ8 300 aaPredicted RBP4.18□□□□□ -1.74
LRRC28-220ENST00000561253 C9JQL5 133 aa4.18□□□□□ -1.74
LRRC28-220ENST00000561253 H7BYZ3 331 aa4.18□□□□□ -1.74
LRRC28-220ENST00000561253 DEFB4AO15263 64 aa4.18□□□□□ -1.74
LRRC28-220ENST00000561253 RNASE4P34096 147 aaKnown RBP4.18□□□□□ -1.74
LRRC28-220ENST00000561253 TMEM183BQ1AE95 376 aa4.18□□□□□ -1.74
LRRC28-220ENST00000561253 ZNF506Q5JVG8 444 aa4.18□□□□□ -1.74
LRRC28-220ENST00000561253 TMEM256Q8N2U0 113 aa4.18□□□□□ -1.74
LRRC28-220ENST00000561253 LINC00612Q8N6U2 182 aa4.18□□□□□ -1.74
LRRC28-220ENST00000561253 RASL10AQ92737 203 aa4.18□□□□□ -1.74
LRRC28-220ENST00000561253 ZC2HC1AQ96GY0 325 aa4.18□□□□□ -1.74
LRRC28-220ENST00000561253 FMC1Q96HJ9 113 aa4.18□□□□□ -1.74
LRRC28-220ENST00000561253 FAM210AQ96ND0 272 aa4.18□□□□□ -1.74
LRRC28-220ENST00000561253 TREM1Q9NP99 234 aa4.18□□□□□ -1.74
LRRC28-220ENST00000561253 VAX2Q9UIW0 290 aa4.18□□□□□ -1.74
LRRC28-220ENST00000561253 TP53TG3Q9ULZ0 132 aa4.18□□□□□ -1.74
LRRC28-220ENST00000561253 RPH3ALQ9UNE2 315 aa4.18□□□□□ -1.74
LRRC28-220ENST00000561253 CELA1Q9UNI1 258 aa4.18□□□□□ -1.74
LRRC28-220ENST00000561253 GOLT1BQ9Y3E0 138 aa4.18□□□□□ -1.74
LRRC28-220ENST00000561253 FAT2Q9NYQ8 4349 aa4.17□□□□□ -1.74
LRRC28-220ENST00000561253 IGKV3D-20A0A0C4DH25 116 aa4.17□□□□□ -1.74
LRRC28-220ENST00000561253 F6UZH7 168 aa4.17□□□□□ -1.74
LRRC28-220ENST00000561253 IFNA7P01567 189 aa4.17□□□□□ -1.74
LRRC28-220ENST00000561253 GPX1P07203 203 aa4.17□□□□□ -1.74
LRRC28-220ENST00000561253 TAGLN2P37802 199 aaKnown RBP4.17□□□□□ -1.74
LRRC28-220ENST00000561253 RPL35P42766 123 aaKnown RBP4.17□□□□□ -1.74
LRRC28-220ENST00000561253 PRNTQ86SH4 94 aa4.17□□□□□ -1.74
LRRC28-220ENST00000561253 PYGO2Q9BRQ0 406 aa4.17□□□□□ -1.74
LRRC28-220ENST00000561253 ZFP30Q9Y2G7 519 aa4.17□□□□□ -1.74
LRRC28-220ENST00000561253 FRAS1Q86XX4 4008 aa4.17□□□□□ -1.74
LRRC28-220ENST00000561253 IGHV3OR16-12A0A075B7B8 117 aa4.16□□□□□ -1.74
LRRC28-220ENST00000561253 IGHV1OR15-1A0A075B7D0 117 aa4.16□□□□□ -1.74
LRRC28-220ENST00000561253 TRAV21A0A0B4J279 112 aa4.16□□□□□ -1.74
LRRC28-220ENST00000561253 RBFOX3A6NFN3 312 aa4.16□□□□□ -1.74
LRRC28-220ENST00000561253 TMEM250H0YL14 139 aa4.16□□□□□ -1.74
LRRC28-220ENST00000561253 TEX46H3BTG2 121 aa4.16□□□□□ -1.74
LRRC28-220ENST00000561253 PDE6DO43924 150 aa4.16□□□□□ -1.74
LRRC28-220ENST00000561253 GCGP01275 180 aa4.16□□□□□ -1.74
LRRC28-220ENST00000561253 PFN1P07737 140 aaKnown RBP4.16□□□□□ -1.74
LRRC28-220ENST00000561253 SRP19P09132 144 aaKnown RBP4.16□□□□□ -1.74
LRRC28-220ENST00000561253 AKR1C3P42330 323 aa4.16□□□□□ -1.74
LRRC28-220ENST00000561253 DAZ2Q13117 558 aaKnown RBP4.16□□□□□ -1.74
LRRC28-220ENST00000561253 RRN3P1Q2M238 152 aa4.16□□□□□ -1.74
LRRC28-220ENST00000561253 C12orf74Q32Q52 190 aa4.16□□□□□ -1.74
LRRC28-220ENST00000561253 SMUG1Q53HV7 270 aa4.16□□□□□ -1.74
LRRC28-220ENST00000561253 SAPCD1Q5SSQ6 148 aa4.16□□□□□ -1.74
LRRC28-220ENST00000561253 ZNF493Q6ZR52 646 aa4.16□□□□□ -1.74
LRRC28-220ENST00000561253 TMEM183AQ8IXX5 376 aa4.16□□□□□ -1.74
LRRC28-220ENST00000561253 LINC00518Q8N0U6 118 aa4.16□□□□□ -1.74
LRRC28-220ENST00000561253 TMEM263Q8WUH6 116 aaKnown RBP4.16□□□□□ -1.74
LRRC28-220ENST00000561253 LINC01587Q99440 93 aa4.16□□□□□ -1.74
LRRC28-220ENST00000561253 DNAH11Q96DT5 4516 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 IGHV3-16A0A0C4DH30 117 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 RAB19A4D1S5 217 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 TMEM189A5PLL7 270 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 C19orf71A6NCJ1 209 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 LYRM9A8MSI8 78 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 C9JCJ5 164 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 K7EN84 100 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 K7EQM0 130 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 IFNA1P01562 189 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 S100A9P06702 114 aaKnown RBP4.15□□□□□ -1.75
LRRC28-220ENST00000561253 TCL1AP56279 114 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 SSTP61278 116 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 CENPWQ5EE01 88 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 CLLU1Q5K131 121 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 DNLZQ5SXM8 178 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 IBA57Q5T440 356 aaKnown RBP4.15□□□□□ -1.75
LRRC28-220ENST00000561253 FAM222AQ5U5X8 452 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 ZNF767PQ75MW2 155 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 EIF4E3Q8N5X7 224 aaKnown RBP4.15□□□□□ -1.75
LRRC28-220ENST00000561253 MUC7Q8TAX7 377 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 C16orf74Q96GX8 76 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 C9orf85Q96MD7 179 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 C18orf15Q96N68 181 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 NIPSNAP3BQ9BS92 247 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 TMEM208Q9BTX3 173 aa4.15□□□□□ -1.75
LRRC28-220ENST00000561253 TEX48A0A1B0GUV7 120 aa4.14□□□□□ -1.75
LRRC28-220ENST00000561253 FABP5P3A8MUU1 101 aa4.14□□□□□ -1.75
LRRC28-220ENST00000561253 KRBOX1C9JBD0 128 aa4.14□□□□□ -1.75
LRRC28-220ENST00000561253 GNRH2O43555 120 aa4.14□□□□□ -1.75
LRRC28-220ENST00000561253 SPINK4O60575 86 aa4.14□□□□□ -1.75
LRRC28-220ENST00000561253 SH2D1AO60880 128 aa4.14□□□□□ -1.75
LRRC28-220ENST00000561253 TYMSP04818 313 aa4.14□□□□□ -1.75
LRRC28-220ENST00000561253 RNASE3P12724 160 aaKnown RBP4.14□□□□□ -1.75
LRRC28-220ENST00000561253 BAGE2Q86Y30 109 aa4.14□□□□□ -1.75
LRRC28-220ENST00000561253 POM121L12Q8N7R1 296 aa4.14□□□□□ -1.75
LRRC28-220ENST00000561253 SMIM12Q96EX1 92 aa4.14□□□□□ -1.75
LRRC28-220ENST00000561253 NDFIP1Q9BT67 221 aa4.14□□□□□ -1.75
LRRC28-220ENST00000561253 NOP10Q9NPE3 64 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms