RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 TRBV20OR9-2A0A075B6H5 130 aa7.54□□□□□ -1.2
TPM1-229ENST00000561242 FAM231BA6NCW3 169 aa7.54□□□□□ -1.2
TPM1-229ENST00000561242 K7EQD1 137 aa7.54□□□□□ -1.2
TPM1-229ENST00000561242 SNAI2O43623 268 aa7.54□□□□□ -1.2
TPM1-229ENST00000561242 S100PP25815 95 aa7.54□□□□□ -1.2
TPM1-229ENST00000561242 RAB4BP61018 213 aa7.54□□□□□ -1.2
TPM1-229ENST00000561242 RPL23P62829 140 aaKnown RBP7.54□□□□□ -1.2
TPM1-229ENST00000561242 C14orf178Q8N769 122 aaPredicted RBP7.54□□□□□ -1.2
TPM1-229ENST00000561242 POM121L12Q8N7R1 296 aa7.54□□□□□ -1.2
TPM1-229ENST00000561242 ANAPC16Q96DE5 110 aa7.54□□□□□ -1.2
TPM1-229ENST00000561242 LCE6AA0A183 80 aa7.53□□□□□ -1.2
TPM1-229ENST00000561242 A0A1B0GUT8 65 aa7.53□□□□□ -1.2
TPM1-229ENST00000561242 K7EN84 100 aa7.53□□□□□ -1.2
TPM1-229ENST00000561242 HOXA5P20719 270 aa7.53□□□□□ -1.2
TPM1-229ENST00000561242 NTF3P20783 257 aa7.53□□□□□ -1.2
TPM1-229ENST00000561242 SRSF3P84103 164 aaKnown RBP7.53□□□□□ -1.2
TPM1-229ENST00000561242 OR10AG1Q8NH19 301 aa7.53□□□□□ -1.2
TPM1-229ENST00000561242 ISOC2Q96AB3 205 aa7.53□□□□□ -1.2
TPM1-229ENST00000561242 DPH3P1Q9H4G8 78 aa7.53□□□□□ -1.2
TPM1-229ENST00000561242 URGCP-MRPS24S4R325 110 aa7.53□□□□□ -1.2
TPM1-229ENST00000561242 A0A096LPF7 62 aa7.52□□□□□ -1.21
TPM1-229ENST00000561242 TRBV10-1A0A0K0K1A3 114 aa7.52□□□□□ -1.21
TPM1-229ENST00000561242 A0A1B0GW15 77 aa7.52□□□□□ -1.21
TPM1-229ENST00000561242 GAGE12JA6NER3 117 aa7.52□□□□□ -1.21
TPM1-229ENST00000561242 HIGD1CA8MV81 97 aa7.52□□□□□ -1.21
TPM1-229ENST00000561242 GATA1P15976 413 aaPredicted RBP7.52□□□□□ -1.21
TPM1-229ENST00000561242 GAGE1Q13065 139 aa7.52□□□□□ -1.21
TPM1-229ENST00000561242 GAGE4Q13068 117 aa7.52□□□□□ -1.21
TPM1-229ENST00000561242 GAGE5Q13069 117 aa7.52□□□□□ -1.21
TPM1-229ENST00000561242 GAGE13Q4V321 117 aa7.52□□□□□ -1.21
TPM1-229ENST00000561242 TMEM97Q5BJF2 176 aa7.52□□□□□ -1.21
TPM1-229ENST00000561242 OR10J3Q5JRS4 329 aa7.52□□□□□ -1.21
TPM1-229ENST00000561242 ATP6V0E2Q8NHE4 81 aa7.52□□□□□ -1.21
TPM1-229ENST00000561242 LINC00476Q8WZB0 136 aa7.52□□□□□ -1.21
TPM1-229ENST00000561242 SSBP4Q9BWG4 385 aaPredicted RBP7.52□□□□□ -1.21
TPM1-229ENST00000561242 SCRT2Q9NQ03 307 aa7.52□□□□□ -1.21
TPM1-229ENST00000561242 A0A087WWC5 75 aa7.51□□□□□ -1.21
TPM1-229ENST00000561242 TMEM218A2RU14 115 aa7.51□□□□□ -1.21
TPM1-229ENST00000561242 IFITM2Q01629 132 aa7.51□□□□□ -1.21
TPM1-229ENST00000561242 TTC32Q5I0X7 151 aa7.51□□□□□ -1.21
TPM1-229ENST00000561242 SLC25A29Q8N8R3 303 aa7.51□□□□□ -1.21
TPM1-229ENST00000561242 C9JQL5 133 aa7.5□□□□□ -1.21
TPM1-229ENST00000561242 PPP1R17O96001 155 aa7.5□□□□□ -1.21
TPM1-229ENST00000561242 IGLC6P0CF74 106 aa7.5□□□□□ -1.21
TPM1-229ENST00000561242 EVI2AP22794 236 aa7.5□□□□□ -1.21
TPM1-229ENST00000561242 ZNRF2Q8NHG8 242 aa7.5□□□□□ -1.21
TPM1-229ENST00000561242 DNAJC30Q96LL9 226 aa7.5□□□□□ -1.21
TPM1-229ENST00000561242 SEC11CQ9BY50 192 aa7.5□□□□□ -1.21
TPM1-229ENST00000561242 JPT2Q9H910 190 aa7.5□□□□□ -1.21
TPM1-229ENST00000561242 TRBV7-3A0A075B6L6 115 aa7.49□□□□□ -1.21
TPM1-229ENST00000561242 LINC00862A6NCI5 91 aa7.49□□□□□ -1.21
TPM1-229ENST00000561242 CTRLP40313 264 aa7.49□□□□□ -1.21
TPM1-229ENST00000561242 PKIAP61925 76 aa7.49□□□□□ -1.21
TPM1-229ENST00000561242 BTF3L4Q96K17 158 aa7.49□□□□□ -1.21
TPM1-229ENST00000561242 CTDSP1Q9GZU7 261 aa7.49□□□□□ -1.21
TPM1-229ENST00000561242 GTSF1LQ9H1H1 148 aa7.49□□□□□ -1.21
TPM1-229ENST00000561242 TMEM262E9PQX1 116 aa7.48□□□□□ -1.21
TPM1-229ENST00000561242 CRYGDP07320 174 aa7.48□□□□□ -1.21
TPM1-229ENST00000561242 CAMPP49913 170 aa7.48□□□□□ -1.21
TPM1-229ENST00000561242 RASL11AQ6T310 242 aa7.48□□□□□ -1.21
TPM1-229ENST00000561242 VSIG2Q96IQ7 327 aa7.48□□□□□ -1.21
TPM1-229ENST00000561242 SAMD10Q9BYL1 202 aa7.48□□□□□ -1.21
TPM1-229ENST00000561242 Q9H8V8 135 aa7.48□□□□□ -1.21
TPM1-229ENST00000561242 V9GYV3 84 aa7.48□□□□□ -1.21
TPM1-229ENST00000561242 DNAH3Q8TD57 4116 aa7.48□□□□□ -1.21
TPM1-229ENST00000561242 NXPH4O95158 308 aa7.47□□□□□ -1.21
TPM1-229ENST00000561242 SNAPINO95295 136 aa7.47□□□□□ -1.21
TPM1-229ENST00000561242 FOXA3P55318 350 aaPredicted RBP7.47□□□□□ -1.21
TPM1-229ENST00000561242 LYPD5Q6UWN5 251 aa7.47□□□□□ -1.21
TPM1-229ENST00000561242 DAZ4Q86SG3 579 aaKnown RBP7.47□□□□□ -1.21
TPM1-229ENST00000561242 SVBPQ8N300 66 aa7.47□□□□□ -1.21
TPM1-229ENST00000561242 FRZBQ92765 325 aa7.47□□□□□ -1.21
TPM1-229ENST00000561242 RPS10P5Q9NQ39 176 aa7.47□□□□□ -1.21
TPM1-229ENST00000561242 DAZ3Q9NR90 486 aaKnown RBP7.47□□□□□ -1.21
TPM1-229ENST00000561242 MRPS16Q9Y3D3 137 aaKnown RBP7.47□□□□□ -1.21
TPM1-229ENST00000561242 IGLV2-18A0A075B6J9 118 aa7.46□□□□□ -1.22
TPM1-229ENST00000561242 A0A087WX48 190 aa7.46□□□□□ -1.22
TPM1-229ENST00000561242 M0R2N4 97 aa7.46□□□□□ -1.22
TPM1-229ENST00000561242 UBE2L6O14933 153 aa7.46□□□□□ -1.22
TPM1-229ENST00000561242 SIVA1O15304 175 aa7.46□□□□□ -1.22
TPM1-229ENST00000561242 APOC3P02656 99 aa7.46□□□□□ -1.22
TPM1-229ENST00000561242 HBBP68871 147 aa7.46□□□□□ -1.22
TPM1-229ENST00000561242 SMAGPQ0VAQ4 97 aa7.46□□□□□ -1.22
TPM1-229ENST00000561242 ELOBQ15370 118 aa7.46□□□□□ -1.22
TPM1-229ENST00000561242 RHEBQ15382 184 aa7.46□□□□□ -1.22
TPM1-229ENST00000561242 ESRGQ1W209 222 aa7.46□□□□□ -1.22
TPM1-229ENST00000561242 C10orf126Q8N4M7 172 aa7.46□□□□□ -1.22
TPM1-229ENST00000561242 NUP35Q8NFH5 326 aa7.46□□□□□ -1.22
TPM1-229ENST00000561242 NIT2Q9NQR4 276 aa7.46□□□□□ -1.22
TPM1-229ENST00000561242 LOC100131303A0A0U1RQF7 123 aa7.45□□□□□ -1.22
TPM1-229ENST00000561242 SMIM27A0A1W2PRY6 76 aa7.45□□□□□ -1.22
TPM1-229ENST00000561242 K7EP13 123 aa7.45□□□□□ -1.22
TPM1-229ENST00000561242 PMCHP20382 165 aa7.45□□□□□ -1.22
TPM1-229ENST00000561242 LELP1Q5T871 98 aa7.45□□□□□ -1.22
TPM1-229ENST00000561242 MRPL54Q6P161 138 aaKnown RBP7.45□□□□□ -1.22
TPM1-229ENST00000561242 GTSF1Q8WW33 167 aa7.45□□□□□ -1.22
TPM1-229ENST00000561242 MRAP2Q96G30 205 aa7.45□□□□□ -1.22
TPM1-229ENST00000561242 TMEM191AQ9H0A3 160 aa7.45□□□□□ -1.22
TPM1-229ENST00000561242 MSRB1Q9NZV6 116 aa7.45□□□□□ -1.22
TPM1-229ENST00000561242 LINC00588Q9Y4M8 146 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms