RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 MYH7BA7E2Y1 1941 aa1.19□□□□□ -2.22
RTF1-207ENST00000561076 PCNTO95613 3336 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 CD163L1Q9NR16 1453 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 QSER1Q2KHR3 1735 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 SBF2Q86WG5 1849 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 TRBV10-3A0A0K0K1G6 114 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 NAP1L6A6NFF2 107 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 A6NN06 94 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 GNGT2O14610 69 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 DNAL4O96015 105 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 GYPAP02724 150 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 GNG11P61952 73 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 PDE6HQ13956 83 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 C1orf137Q5JT78 98 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 ZCCHC23Q6ZST2 131 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 ZNF833PQ6ZTB9 187 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 Q8TAT8 98 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 MGST2Q99735 147 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 PMCHL2Q9BQD1 86 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 KRTAP9-9Q9BYP9 154 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 TMEM14CQ9P0S9 112 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 SNURFQ9Y675 71 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 E9PCH4 1651 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 LMO7Q8WWI1 1683 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 LCTP09848 1927 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 GREB1Q4ZG55 1949 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 ANAPC1Q9H1A4 1944 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 AKAP12Q02952 1782 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 COL1A2P08123 1366 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 COL24A1Q17RW2 1714 aa1.18□□□□□ -2.22
RTF1-207ENST00000561076 CASP8AP2Q9UKL3 1982 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 BTAF1O14981 1849 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 IGKV1D-17A0A075B6S4 117 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 IGLV3-32A0A0A0MS00 114 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 TRAV13-2A0A0B4J235 113 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 A0A0G2JQZ4 141 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 TRBV10-1A0A0K0K1A3 114 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 LRCOL1A6NCL2 159 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 SDHAF1A6NFY7 115 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 PITX3O75364 302 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 IGKV1-17P01599 117 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 SLC25A6P12236 298 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 MOBPQ13875 183 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 Q1T7F1 81 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 MPV17LQ2QL34 196 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 C9orf116Q5BN46 136 aaPredicted RBP1.17□□□□□ -2.22
RTF1-207ENST00000561076 C6orf52Q5T4I8 152 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 IGFL1Q6UW32 110 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 CYP2G1PQ6ZSU1 146 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 COMMD6Q7Z4G1 85 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 NDUFA11Q86Y39 141 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 C9orf62Q8N4C0 152 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 PPP1R1CQ8WVI7 109 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 DMAC1Q96GE9 116 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 LINC00052Q96N35 136 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 DSCR8Q96T75 97 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 TXNDC17Q9BRA2 123 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 PRO3102Q9H379 93 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 CDC42SE1Q9NRR8 79 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 MRPL35Q9NZE8 188 aaKnown RBP1.17□□□□□ -2.22
RTF1-207ENST00000561076 MRPL36Q9P0J6 103 aaKnown RBP1.17□□□□□ -2.22
RTF1-207ENST00000561076 KIF26AQ9ULI4 1882 aaPredicted RBP1.17□□□□□ -2.22
RTF1-207ENST00000561076 SCN9AQ15858 1988 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 C4BP0C0L5 1744 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 ITSN1Q15811 1721 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 KNDC1Q76NI1 1749 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 PKD1L3Q7Z443 1732 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 ZNF646O15015 1829 aaPredicted RBP1.17□□□□□ -2.22
RTF1-207ENST00000561076 PRR14LQ5THK1 2151 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 PTPRSQ13332 1948 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 A0A0C4DFX4 3053 aa1.17□□□□□ -2.22
RTF1-207ENST00000561076 ADAMTS7Q9UKP4 1686 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 SBF1O95248 1867 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 NYNRINQ9P2P1 1898 aaKnown RBP1.16□□□□□ -2.22
RTF1-207ENST00000561076 CACNA1BQ00975 2339 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 MYH9P35579 1960 aaKnown RBP1.16□□□□□ -2.22
RTF1-207ENST00000561076 C4AP0C0L4 1744 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 IFT172Q9UG01 1749 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 TRAV23DV6A0A075B6W5 121 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 A0A1W2PNN7 141 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 CRYM-AS1A6NIL9 109 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 ATOX1O00244 68 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 CCL16O15467 120 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 PPYP01298 95 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 IGHV3-33P01772 117 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 IGKCP01834 107 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 KRTAP1-4P0C5Y4 121 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 FAUP35544 74 aaKnown RBP1.16□□□□□ -2.22
RTF1-207ENST00000561076 ASIPP42127 132 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 INSL4Q14641 139 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 PEA15Q15121 130 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 LCE3BQ5TA77 95 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 LYPD5Q6UWN5 251 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.16□□□□□ -2.22
RTF1-207ENST00000561076 FP248Q71RG6 208 aaPredicted RBP1.16□□□□□ -2.22
RTF1-207ENST00000561076 SBSPONQ8IVN8 264 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 Q8N8P6 123 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 C15orf53Q8NAA6 179 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 S100A13Q99584 98 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 KRTAP4-12Q9BQ66 201 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms