RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 LINC01551Q86U37 167 aa10.67□□□□□ -0.7
RABGGTA-219ENST00000560871 ZNF727A8MUV8 499 aa10.66□□□□□ -0.7
RABGGTA-219ENST00000560871 M0R2N4 97 aa10.66□□□□□ -0.7
RABGGTA-219ENST00000560871 IFITM2Q01629 132 aa10.66□□□□□ -0.7
RABGGTA-219ENST00000560871 Q6ZR54 194 aa10.66□□□□□ -0.7
RABGGTA-219ENST00000560871 LINC00336Q6ZUF6 198 aa10.66□□□□□ -0.7
RABGGTA-219ENST00000560871 NEGR1Q7Z3B1 354 aa10.66□□□□□ -0.7
RABGGTA-219ENST00000560871 FER1L6-AS1Q8NA97 138 aa10.66□□□□□ -0.7
RABGGTA-219ENST00000560871 SMDT1Q9H4I9 107 aa10.66□□□□□ -0.7
RABGGTA-219ENST00000560871 RPP21Q9H633 154 aaKnown RBP10.66□□□□□ -0.7
RABGGTA-219ENST00000560871 HECTD4Q9Y4D8 3996 aa10.66□□□□□ -0.7
RABGGTA-219ENST00000560871 DNAH11Q96DT5 4516 aa10.65□□□□□ -0.7
RABGGTA-219ENST00000560871 A0A087WWL8 130 aa10.65□□□□□ -0.7
RABGGTA-219ENST00000560871 MUC21A0A0G2JKD1 596 aa10.65□□□□□ -0.7
RABGGTA-219ENST00000560871 MUC21A0A140T8X8 626 aa10.65□□□□□ -0.7
RABGGTA-219ENST00000560871 XKRY2A2RUG3 117 aa10.65□□□□□ -0.7
RABGGTA-219ENST00000560871 LINC00694P0DN24 101 aa10.65□□□□□ -0.7
RABGGTA-219ENST00000560871 CTRLP40313 264 aa10.65□□□□□ -0.7
RABGGTA-219ENST00000560871 FAM74A4Q5TZK3 123 aa10.65□□□□□ -0.7
RABGGTA-219ENST00000560871 SPANXN1Q5VSR9 72 aa10.65□□□□□ -0.7
RABGGTA-219ENST00000560871 LYPD5Q6UWN5 251 aa10.65□□□□□ -0.7
RABGGTA-219ENST00000560871 PRADC1Q9BSG0 188 aa10.65□□□□□ -0.7
RABGGTA-219ENST00000560871 RTL8CO15255 209 aa10.64□□□□□ -0.71
RABGGTA-219ENST00000560871 PEA15Q15121 130 aa10.64□□□□□ -0.71
RABGGTA-219ENST00000560871 FAM74A3Q4VXF1 159 aa10.63□□□□□ -0.71
RABGGTA-219ENST00000560871 CLLU1Q5K131 121 aa10.63□□□□□ -0.71
RABGGTA-219ENST00000560871 C14orf178Q8N769 122 aaPredicted RBP10.63□□□□□ -0.71
RABGGTA-219ENST00000560871 TPPP3Q9BW30 176 aa10.63□□□□□ -0.71
RABGGTA-219ENST00000560871 CNFNQ9BYD5 112 aa10.63□□□□□ -0.71
RABGGTA-219ENST00000560871 Q9UF83 564 aa10.63□□□□□ -0.71
RABGGTA-219ENST00000560871 KIF25-AS1Q9Y6Z4 181 aa10.63□□□□□ -0.71
RABGGTA-219ENST00000560871 PKD1P98161 4303 aa10.62□□□□□ -0.71
RABGGTA-219ENST00000560871 NBDYA0A0U1RRE5 68 aa10.62□□□□□ -0.71
RABGGTA-219ENST00000560871 A0A1B0GVY2 172 aa10.62□□□□□ -0.71
RABGGTA-219ENST00000560871 A0A1W2PPQ1 181 aa10.62□□□□□ -0.71
RABGGTA-219ENST00000560871 CT83Q5H943 113 aa10.62□□□□□ -0.71
RABGGTA-219ENST00000560871 LYZL1Q6UWQ5 148 aa10.62□□□□□ -0.71
RABGGTA-219ENST00000560871 SH2D6Q7Z4S9 175 aa10.62□□□□□ -0.71
RABGGTA-219ENST00000560871 GTSF1Q8WW33 167 aa10.62□□□□□ -0.71
RABGGTA-219ENST00000560871 AP1S3Q96PC3 154 aa10.62□□□□□ -0.71
RABGGTA-219ENST00000560871 Q9H8V8 135 aa10.62□□□□□ -0.71
RABGGTA-219ENST00000560871 F2Z2F3 143 aa10.61□□□□□ -0.71
RABGGTA-219ENST00000560871 GATCO43716 136 aaKnown RBP10.61□□□□□ -0.71
RABGGTA-219ENST00000560871 TIRAPP58753 221 aa10.61□□□□□ -0.71
RABGGTA-219ENST00000560871 ERVFC1-1P60608 527 aa10.61□□□□□ -0.71
RABGGTA-219ENST00000560871 RAB14P61106 215 aa10.61□□□□□ -0.71
RABGGTA-219ENST00000560871 RPL23P62829 140 aaKnown RBP10.61□□□□□ -0.71
RABGGTA-219ENST00000560871 CACNG7P62955 275 aa10.61□□□□□ -0.71
RABGGTA-219ENST00000560871 ISOC2Q96AB3 205 aa10.61□□□□□ -0.71
RABGGTA-219ENST00000560871 KRTAP1-5Q9BYS1 174 aa10.61□□□□□ -0.71
RABGGTA-219ENST00000560871 PRSS29PA6NIE9 313 aa10.6□□□□□ -0.71
RABGGTA-219ENST00000560871 LINC00315P59091 139 aa10.6□□□□□ -0.71
RABGGTA-219ENST00000560871 SSTP61278 116 aa10.6□□□□□ -0.71
RABGGTA-219ENST00000560871 OSTCQ9NRP0 149 aa10.6□□□□□ -0.71
RABGGTA-219ENST00000560871 MSRB1Q9NZV6 116 aa10.6□□□□□ -0.71
RABGGTA-219ENST00000560871 NAT8Q9UHE5 227 aa10.6□□□□□ -0.71
RABGGTA-219ENST00000560871 DYNC1H1Q14204 4646 aaKnown RBP10.59□□□□□ -0.71
RABGGTA-219ENST00000560871 TRBV10-1A0A0K0K1A3 114 aa10.59□□□□□ -0.71
RABGGTA-219ENST00000560871 GAGE12JA6NER3 117 aa10.59□□□□□ -0.71
RABGGTA-219ENST00000560871 RAB4BP61018 213 aa10.59□□□□□ -0.71
RABGGTA-219ENST00000560871 GAGE1Q13065 139 aa10.59□□□□□ -0.71
RABGGTA-219ENST00000560871 GAGE4Q13068 117 aa10.59□□□□□ -0.71
RABGGTA-219ENST00000560871 GAGE5Q13069 117 aa10.59□□□□□ -0.71
RABGGTA-219ENST00000560871 ZNF56Q15929 161 aa10.59□□□□□ -0.71
RABGGTA-219ENST00000560871 TMEM241Q24JQ0 296 aa10.59□□□□□ -0.71
RABGGTA-219ENST00000560871 GAGE13Q4V321 117 aa10.59□□□□□ -0.71
RABGGTA-219ENST00000560871 WDR73Q6P4I2 378 aa10.59□□□□□ -0.71
RABGGTA-219ENST00000560871 A8MWL6 223 aa10.58□□□□□ -0.72
RABGGTA-219ENST00000560871 SIVA1O15304 175 aa10.58□□□□□ -0.72
RABGGTA-219ENST00000560871 WFDC10BQ8IUB3 73 aa10.58□□□□□ -0.72
RABGGTA-219ENST00000560871 NTF3P20783 257 aa10.57□□□□□ -0.72
RABGGTA-219ENST00000560871 FOXA3P55318 350 aaPredicted RBP10.57□□□□□ -0.72
RABGGTA-219ENST00000560871 TTC32Q5I0X7 151 aa10.57□□□□□ -0.72
RABGGTA-219ENST00000560871 SOHLH1Q5JUK2 328 aa10.57□□□□□ -0.72
RABGGTA-219ENST00000560871 OR10G8Q8NGN5 311 aa10.57□□□□□ -0.72
RABGGTA-219ENST00000560871 ATP6V0E2Q8NHE4 81 aa10.57□□□□□ -0.72
RABGGTA-219ENST00000560871 GTSF1LQ9H1H1 148 aa10.57□□□□□ -0.72
RABGGTA-219ENST00000560871 V9GYV3 84 aa10.57□□□□□ -0.72
RABGGTA-219ENST00000560871 TRGC1P0CF51 173 aa10.56□□□□□ -0.72
RABGGTA-219ENST00000560871 SMIM17P0DL12 118 aa10.56□□□□□ -0.72
RABGGTA-219ENST00000560871 ADIRFQ15847 76 aa10.56□□□□□ -0.72
RABGGTA-219ENST00000560871 NEXN-AS1Q8NBZ9 246 aa10.56□□□□□ -0.72
RABGGTA-219ENST00000560871 TSKUQ8WUA8 353 aa10.56□□□□□ -0.72
RABGGTA-219ENST00000560871 GFRA4Q9GZZ7 299 aa10.56□□□□□ -0.72
RABGGTA-219ENST00000560871 HERC2O95714 4834 aa10.55□□□□□ -0.72
RABGGTA-219ENST00000560871 FAM231BA6NCW3 169 aa10.55□□□□□ -0.72
RABGGTA-219ENST00000560871 DNAH10OSP0CZ25 163 aa10.55□□□□□ -0.72
RABGGTA-219ENST00000560871 EVI2AP22794 236 aa10.55□□□□□ -0.72
RABGGTA-219ENST00000560871 LELP1Q5T871 98 aa10.55□□□□□ -0.72
RABGGTA-219ENST00000560871 C1orf134Q5TEV5 83 aa10.55□□□□□ -0.72
RABGGTA-219ENST00000560871 TRBV7-3A0A075B6L6 115 aa10.54□□□□□ -0.72
RABGGTA-219ENST00000560871 HIGD1CA8MV81 97 aa10.54□□□□□ -0.72
RABGGTA-219ENST00000560871 UBE2D3P61077 147 aa10.54□□□□□ -0.72
RABGGTA-219ENST00000560871 UBE2D2P62837 147 aa10.54□□□□□ -0.72
RABGGTA-219ENST00000560871 RPL36AP83881 106 aaKnown RBP10.54□□□□□ -0.72
RABGGTA-219ENST00000560871 C15orf54Q8N8G6 183 aa10.54□□□□□ -0.72
RABGGTA-219ENST00000560871 RPL36ALQ969Q0 106 aaKnown RBP10.54□□□□□ -0.72
RABGGTA-219ENST00000560871 PGLYRP4Q96LB8 373 aa10.54□□□□□ -0.72
RABGGTA-219ENST00000560871 DPH3P1Q9H4G8 78 aa10.54□□□□□ -0.72
RABGGTA-219ENST00000560871 MGPP08493 103 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms