RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 ZNF876PQ49A33 203 aa8.11□□□□□ -1.11
SNX1-212ENST00000560861 OR10J3Q5JRS4 329 aa8.11□□□□□ -1.11
SNX1-212ENST00000560861 UFSP1Q6NVU6 142 aa8.11□□□□□ -1.11
SNX1-212ENST00000560861 C14orf178Q8N769 122 aaPredicted RBP8.11□□□□□ -1.11
SNX1-212ENST00000560861 RASL10AQ92737 203 aa8.11□□□□□ -1.11
SNX1-212ENST00000560861 C16orf74Q96GX8 76 aa8.11□□□□□ -1.11
SNX1-212ENST00000560861 OVOL2Q9BRP0 275 aa8.11□□□□□ -1.11
SNX1-212ENST00000560861 NDUFAF3Q9BU61 184 aa8.11□□□□□ -1.11
SNX1-212ENST00000560861 LOC105371267A0A1B0GV96 52 aa8.1□□□□□ -1.11
SNX1-212ENST00000560861 SMIM9A6NGZ8 99 aa8.1□□□□□ -1.11
SNX1-212ENST00000560861 D6R8Y8 96 aa8.1□□□□□ -1.11
SNX1-212ENST00000560861 HOXA5P20719 270 aa8.1□□□□□ -1.11
SNX1-212ENST00000560861 NDUFA6P56556 154 aa8.1□□□□□ -1.11
SNX1-212ENST00000560861 IQCJQ1A5X6 159 aa8.1□□□□□ -1.11
SNX1-212ENST00000560861 RRN3P1Q2M238 152 aa8.1□□□□□ -1.11
SNX1-212ENST00000560861 Q6ZWC4 215 aa8.1□□□□□ -1.11
SNX1-212ENST00000560861 RNF183Q96D59 192 aa8.1□□□□□ -1.11
SNX1-212ENST00000560861 URB1-AS1Q96HZ7 61 aa8.1□□□□□ -1.11
SNX1-212ENST00000560861 SAMD10Q9BYL1 202 aa8.1□□□□□ -1.11
SNX1-212ENST00000560861 SMKR1H3BMG3 65 aa8.09□□□□□ -1.11
SNX1-212ENST00000560861 RS1O15537 224 aa8.09□□□□□ -1.11
SNX1-212ENST00000560861 NCR2O95944 276 aa8.09□□□□□ -1.11
SNX1-212ENST00000560861 PPBPP02775 128 aa8.09□□□□□ -1.11
SNX1-212ENST00000560861 ESDP10768 282 aa8.09□□□□□ -1.11
SNX1-212ENST00000560861 SNRPEP62304 92 aaKnown RBP8.09□□□□□ -1.11
SNX1-212ENST00000560861 DEFB135Q30KP9 77 aa8.09□□□□□ -1.11
SNX1-212ENST00000560861 SMIM15Q7Z3B0 74 aa8.09□□□□□ -1.11
SNX1-212ENST00000560861 ORMDL3Q8N138 153 aa8.09□□□□□ -1.11
SNX1-212ENST00000560861 LINC00612Q8N6U2 182 aa8.09□□□□□ -1.11
SNX1-212ENST00000560861 NRACQ8N912 160 aa8.09□□□□□ -1.11
SNX1-212ENST00000560861 MRAP2Q96G30 205 aa8.09□□□□□ -1.11
SNX1-212ENST00000560861 MRPL16Q9NX20 251 aaKnown RBP8.09□□□□□ -1.11
SNX1-212ENST00000560861 PRKDCP78527 4128 aaKnown RBP8.09□□□□□ -1.11
SNX1-212ENST00000560861 TENM3Q9P273 2699 aa8.09□□□□□ -1.11
SNX1-212ENST00000560861 K7EIL1 84 aa8.08□□□□□ -1.12
SNX1-212ENST00000560861 NUPR1O60356 82 aa8.08□□□□□ -1.12
SNX1-212ENST00000560861 NPYP01303 97 aa8.08□□□□□ -1.12
SNX1-212ENST00000560861 GATA1P15976 413 aaPredicted RBP8.08□□□□□ -1.12
SNX1-212ENST00000560861 LGALS9BQ3B8N2 356 aa8.08□□□□□ -1.12
SNX1-212ENST00000560861 HIST3H2BBQ8N257 126 aa8.08□□□□□ -1.12
SNX1-212ENST00000560861 PRELID3AQ96N28 172 aa8.08□□□□□ -1.12
SNX1-212ENST00000560861 EDA2RQ9HAV5 297 aa8.08□□□□□ -1.12
SNX1-212ENST00000560861 LAMTOR2Q9Y2Q5 125 aa8.08□□□□□ -1.12
SNX1-212ENST00000560861 A0A087WWL8 130 aa8.07□□□□□ -1.12
SNX1-212ENST00000560861 TRAV26-2A0A0B4J265 109 aa8.07□□□□□ -1.12
SNX1-212ENST00000560861 IFITM10A6NMD0 228 aa8.07□□□□□ -1.12
SNX1-212ENST00000560861 PRSS47A8MTI9 375 aa8.07□□□□□ -1.12
SNX1-212ENST00000560861 A8MWV9 139 aa8.07□□□□□ -1.12
SNX1-212ENST00000560861 S100A6P06703 90 aa8.07□□□□□ -1.12
SNX1-212ENST00000560861 CKS2P33552 79 aa8.07□□□□□ -1.12
SNX1-212ENST00000560861 CFAP126Q5VTH2 177 aa8.07□□□□□ -1.12
SNX1-212ENST00000560861 Q6ZTI0 123 aa8.07□□□□□ -1.12
SNX1-212ENST00000560861 SERF1AO75920 110 aa8.06□□□□□ -1.12
SNX1-212ENST00000560861 TNFRSF6BO95407 300 aa8.06□□□□□ -1.12
SNX1-212ENST00000560861 SUMO4Q6EEV6 95 aa8.06□□□□□ -1.12
SNX1-212ENST00000560861 Q8NAQ8 132 aa8.06□□□□□ -1.12
SNX1-212ENST00000560861 OR11H2Q8NH07 326 aa8.06□□□□□ -1.12
SNX1-212ENST00000560861 NOP10Q9NPE3 64 aaKnown RBP8.06□□□□□ -1.12
SNX1-212ENST00000560861 TP53TG1Q9Y2A0 90 aa8.06□□□□□ -1.12
SNX1-212ENST00000560861 IGLV2-18A0A075B6J9 118 aa8.05□□□□□ -1.12
SNX1-212ENST00000560861 TRGV1A0A0A0MS02 117 aa8.05□□□□□ -1.12
SNX1-212ENST00000560861 IGHV4-28A0A0C4DH34 117 aa8.05□□□□□ -1.12
SNX1-212ENST00000560861 LINC01546A6NGU7 62 aa8.05□□□□□ -1.12
SNX1-212ENST00000560861 M0QY20 66 aa8.05□□□□□ -1.12
SNX1-212ENST00000560861 MGPP08493 103 aa8.05□□□□□ -1.12
SNX1-212ENST00000560861 ZFP2Q6ZN57 461 aa8.05□□□□□ -1.12
SNX1-212ENST00000560861 Q6ZSN1 163 aa8.05□□□□□ -1.12
SNX1-212ENST00000560861 BAGE3Q86Y29 109 aa8.05□□□□□ -1.12
SNX1-212ENST00000560861 C18orf15Q96N68 181 aa8.05□□□□□ -1.12
SNX1-212ENST00000560861 TRAV4A0A0B4J268 109 aa8.04□□□□□ -1.12
SNX1-212ENST00000560861 TRBV6-5A0A0K0K1A5 114 aa8.04□□□□□ -1.12
SNX1-212ENST00000560861 RHODO00212 210 aa8.04□□□□□ -1.12
SNX1-212ENST00000560861 PRB2P02812 416 aaPredicted RBP8.04□□□□□ -1.12
SNX1-212ENST00000560861 SMIM17P0DL12 118 aa8.04□□□□□ -1.12
SNX1-212ENST00000560861 MIFP14174 115 aa8.04□□□□□ -1.12
SNX1-212ENST00000560861 NIT1Q86X76 327 aa8.04□□□□□ -1.12
SNX1-212ENST00000560861 RPL39LQ96EH5 51 aaKnown RBP8.04□□□□□ -1.12
SNX1-212ENST00000560861 IGHV3-53P01767 116 aa8.03□□□□□ -1.12
SNX1-212ENST00000560861 RPL32P62910 135 aaKnown RBP8.03□□□□□ -1.12
SNX1-212ENST00000560861 FAM74A4Q5TZK3 123 aa8.03□□□□□ -1.12
SNX1-212ENST00000560861 RETNQ9HD89 108 aa8.03□□□□□ -1.12
SNX1-212ENST00000560861 GAGE12BA1L429 117 aa8.02□□□□□ -1.13
SNX1-212ENST00000560861 LYRM9A8MSI8 78 aa8.02□□□□□ -1.13
SNX1-212ENST00000560861 GAGE7O76087 117 aa8.02□□□□□ -1.13
SNX1-212ENST00000560861 GAGE12FP0CL80 117 aa8.02□□□□□ -1.13
SNX1-212ENST00000560861 GAGE12GP0CL81 117 aa8.02□□□□□ -1.13
SNX1-212ENST00000560861 GAGE12IP0CL82 117 aa8.02□□□□□ -1.13
SNX1-212ENST00000560861 IFI27P40305 119 aaPredicted RBP8.02□□□□□ -1.13
SNX1-212ENST00000560861 ZNF56Q15929 161 aa8.02□□□□□ -1.13
SNX1-212ENST00000560861 CHCHD1Q96BP2 118 aaKnown RBP8.02□□□□□ -1.13
SNX1-212ENST00000560861 ZNF479Q96JC4 524 aa8.02□□□□□ -1.13
SNX1-212ENST00000560861 HIST1H2BLQ99880 126 aa8.02□□□□□ -1.13
SNX1-212ENST00000560861 C20orf78Q9BR46 151 aa8.02□□□□□ -1.13
SNX1-212ENST00000560861 F5H697 171 aa8.01□□□□□ -1.13
SNX1-212ENST00000560861 CIDEAO60543 219 aa8.01□□□□□ -1.13
SNX1-212ENST00000560861 PPP1R17O96001 155 aa8.01□□□□□ -1.13
SNX1-212ENST00000560861 LINC00614P0C842 121 aa8.01□□□□□ -1.13
SNX1-212ENST00000560861 POLR2KP53803 58 aaKnown RBP8.01□□□□□ -1.13
SNX1-212ENST00000560861 SUMO2P61956 95 aaKnown RBP8.01□□□□□ -1.13
SNX1-212ENST00000560861 PDZD11Q5EBL8 140 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms