RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 COX6B1P14854 86 aa13.22□□□□□ -0.29
TRPM1-211ENST00000560658 TRPT1Q86TN4 253 aaKnown RBP13.22□□□□□ -0.29
TRPM1-211ENST00000560658 LINC01356Q8N9X3 169 aa13.22□□□□□ -0.29
TRPM1-211ENST00000560658 CYSRT1A8MQ03 144 aa13.21□□□□□ -0.29
TRPM1-211ENST00000560658 ELANEP08246 267 aa13.21□□□□□ -0.29
TRPM1-211ENST00000560658 NSUN5P1Q3KNT7 163 aa13.21□□□□□ -0.29
TRPM1-211ENST00000560658 SPANXB1Q9NS25 103 aaPredicted RBP13.21□□□□□ -0.29
TRPM1-211ENST00000560658 IGKV3-7A0A075B6H7 116 aa13.21□□□□□ -0.3
TRPM1-211ENST00000560658 TRGV11A0A075B6L2 103 aa13.21□□□□□ -0.3
TRPM1-211ENST00000560658 SDHAF1A6NFY7 115 aa13.21□□□□□ -0.3
TRPM1-211ENST00000560658 DEFB1P60022 68 aa13.21□□□□□ -0.3
TRPM1-211ENST00000560658 SCGB1D4Q6XE38 83 aa13.21□□□□□ -0.3
TRPM1-211ENST00000560658 EDA2RQ9HAV5 297 aa13.21□□□□□ -0.3
TRPM1-211ENST00000560658 IGHV1OR15-1A0A075B7D0 117 aa13.2□□□□□ -0.3
TRPM1-211ENST00000560658 TRAV12-3A0A0B4J271 114 aa13.2□□□□□ -0.3
TRPM1-211ENST00000560658 F5H697 171 aa13.2□□□□□ -0.3
TRPM1-211ENST00000560658 CRYGDP07320 174 aa13.2□□□□□ -0.3
TRPM1-211ENST00000560658 Q6ZS46 218 aa13.2□□□□□ -0.3
TRPM1-211ENST00000560658 ZNF256Q9Y2P7 627 aaPredicted RBP13.2□□□□□ -0.3
TRPM1-211ENST00000560658 IGLV4-69A0A075B6H9 119 aa13.19□□□□□ -0.3
TRPM1-211ENST00000560658 CFAP46Q8IYW2 2715 aa13.18□□□□□ -0.3
TRPM1-211ENST00000560658 ZNF876PQ49A33 203 aa13.18□□□□□ -0.3
TRPM1-211ENST00000560658 NFE4Q86UQ8 179 aa13.18□□□□□ -0.3
TRPM1-211ENST00000560658 NAV2Q8IVL1 2488 aa13.18□□□□□ -0.3
TRPM1-211ENST00000560658 TSHBP01222 138 aa13.17□□□□□ -0.3
TRPM1-211ENST00000560658 UBE2D1P51668 147 aa13.17□□□□□ -0.3
TRPM1-211ENST00000560658 SRSF9Q13242 221 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRPM1-211ENST00000560658 GAGE13Q4V321 117 aa13.17□□□□□ -0.3
TRPM1-211ENST00000560658 LCNL1Q6ZST4 164 aa13.17□□□□□ -0.3
TRPM1-211ENST00000560658 TENM4Q6N022 2769 aa13.17□□□□□ -0.3
TRPM1-211ENST00000560658 LRBAP50851 2863 aa13.17□□□□□ -0.3
TRPM1-211ENST00000560658 SPRY2O43597 315 aa13.17□□□□□ -0.3
TRPM1-211ENST00000560658 RPL24P83731 157 aaKnown RBP13.17□□□□□ -0.3
TRPM1-211ENST00000560658 PIK3CD-AS1Q5SR53 167 aa13.17□□□□□ -0.3
TRPM1-211ENST00000560658 TRAV2A0A0B4J234 112 aa13.16□□□□□ -0.3
TRPM1-211ENST00000560658 M0QY20 66 aa13.16□□□□□ -0.3
TRPM1-211ENST00000560658 SRD5A1P18405 259 aa13.16□□□□□ -0.3
TRPM1-211ENST00000560658 DCHS2Q6V1P9 2916 aa13.16□□□□□ -0.3
TRPM1-211ENST00000560658 ZNF688P0C7X2 276 aa13.15□□□□□ -0.3
TRPM1-211ENST00000560658 CRYBA4P53673 196 aa13.15□□□□□ -0.3
TRPM1-211ENST00000560658 DEFB112Q30KQ8 113 aa13.15□□□□□ -0.3
TRPM1-211ENST00000560658 UBE2E2Q96LR5 201 aa13.15□□□□□ -0.3
TRPM1-211ENST00000560658 A0A087WWL8 130 aa13.14□□□□□ -0.31
TRPM1-211ENST00000560658 AVPP01185 164 aa13.14□□□□□ -0.31
TRPM1-211ENST00000560658 IGHV4-59P01825 116 aa13.14□□□□□ -0.31
TRPM1-211ENST00000560658 ZNF56Q15929 161 aa13.14□□□□□ -0.31
TRPM1-211ENST00000560658 MDFICQ9P1T7 246 aa13.14□□□□□ -0.31
TRPM1-211ENST00000560658 MYO18BQ8IUG5 2567 aa13.14□□□□□ -0.31
TRPM1-211ENST00000560658 HIVEP3Q5T1R4 2406 aa13.13□□□□□ -0.31
TRPM1-211ENST00000560658 A0A0J9YY99 117 aa13.13□□□□□ -0.31
TRPM1-211ENST00000560658 TEX48A0A1B0GUV7 120 aa13.13□□□□□ -0.31
TRPM1-211ENST00000560658 I3L3M4 83 aa13.13□□□□□ -0.31
TRPM1-211ENST00000560658 SCGB1A1P11684 91 aa13.13□□□□□ -0.31
TRPM1-211ENST00000560658 CD300EQ496F6 205 aaPredicted RBP13.13□□□□□ -0.31
TRPM1-211ENST00000560658 ATP6V0E2Q8NHE4 81 aa13.13□□□□□ -0.31
TRPM1-211ENST00000560658 DLX4Q92988 240 aaPredicted RBP13.13□□□□□ -0.31
TRPM1-211ENST00000560658 PTH2Q96A98 100 aa13.13□□□□□ -0.31
TRPM1-211ENST00000560658 VPREB3Q9UKI3 123 aa13.13□□□□□ -0.31
TRPM1-211ENST00000560658 TACC2O95359 2948 aa13.13□□□□□ -0.31
TRPM1-211ENST00000560658 MORN3Q6PF18 240 aaPredicted RBP13.13□□□□□ -0.31
TRPM1-211ENST00000560658 Q8N1Y9 231 aa13.13□□□□□ -0.31
TRPM1-211ENST00000560658 SLC25A29Q8N8R3 303 aa13.13□□□□□ -0.31
TRPM1-211ENST00000560658 MRPL16Q9NX20 251 aaKnown RBP13.13□□□□□ -0.31
TRPM1-211ENST00000560658 A8MTW9 85 aa13.12□□□□□ -0.31
TRPM1-211ENST00000560658 JPT2Q9H910 190 aa13.12□□□□□ -0.31
TRPM1-211ENST00000560658 PGPEP1Q9NXJ5 209 aa13.12□□□□□ -0.31
TRPM1-211ENST00000560658 LEPROTO15243 131 aa13.11□□□□□ -0.31
TRPM1-211ENST00000560658 LGALS3P17931 250 aaKnown RBP13.11□□□□□ -0.31
TRPM1-211ENST00000560658 C20orf203Q8NBC4 194 aa13.11□□□□□ -0.31
TRPM1-211ENST00000560658 PYGO1Q9Y3Y4 419 aa13.11□□□□□ -0.31
TRPM1-211ENST00000560658 ABCA2Q9BZC7 2435 aa13.11□□□□□ -0.31
TRPM1-211ENST00000560658 TRBV20-1A0A075B6N2 111 aa13.1□□□□□ -0.31
TRPM1-211ENST00000560658 H3BMG7 143 aa13.1□□□□□ -0.31
TRPM1-211ENST00000560658 TMEM170BQ5T4T1 132 aa13.1□□□□□ -0.31
TRPM1-211ENST00000560658 FAM74A4Q5TZK3 123 aa13.1□□□□□ -0.31
TRPM1-211ENST00000560658 PLEKHB2Q96CS7 222 aa13.1□□□□□ -0.31
TRPM1-211ENST00000560658 PRO0461Q9UI25 63 aa13.1□□□□□ -0.31
TRPM1-211ENST00000560658 J3QQQ9 107 aa13.1□□□□□ -0.31
TRPM1-211ENST00000560658 RPL39P62891 51 aaKnown RBP13.1□□□□□ -0.31
TRPM1-211ENST00000560658 TMEM95Q3KNT9 176 aa13.1□□□□□ -0.31
TRPM1-211ENST00000560658 Q5PR19 223 aa13.1□□□□□ -0.31
TRPM1-211ENST00000560658 AMTNQ6UX39 209 aa13.1□□□□□ -0.31
TRPM1-211ENST00000560658 COL6A6A6NMZ7 2263 aa13.1□□□□□ -0.31
TRPM1-211ENST00000560658 HECTD1Q9ULT8 2610 aa13.09□□□□□ -0.31
TRPM1-211ENST00000560658 FSHBP01225 129 aa13.09□□□□□ -0.31
TRPM1-211ENST00000560658 EDN2P20800 178 aa13.09□□□□□ -0.31
TRPM1-211ENST00000560658 SYNJ2BPP57105 145 aa13.09□□□□□ -0.31
TRPM1-211ENST00000560658 WFDC2Q14508 124 aa13.09□□□□□ -0.31
TRPM1-211ENST00000560658 A0A096LNT2 108 aa13.08□□□□□ -0.32
TRPM1-211ENST00000560658 UBE2D3P61077 147 aa13.08□□□□□ -0.32
TRPM1-211ENST00000560658 UBE2D2P62837 147 aa13.08□□□□□ -0.32
TRPM1-211ENST00000560658 SPINK13Q1W4C9 94 aa13.08□□□□□ -0.32
TRPM1-211ENST00000560658 Q6YL49 198 aa13.08□□□□□ -0.32
TRPM1-211ENST00000560658 LINC00467Q9BRT7 94 aa13.08□□□□□ -0.32
TRPM1-211ENST00000560658 VCX2Q9H322 139 aa13.08□□□□□ -0.32
TRPM1-211ENST00000560658 TMEM223A0PJW6 202 aa13.07□□□□□ -0.32
TRPM1-211ENST00000560658 A8MWV9 139 aa13.07□□□□□ -0.32
TRPM1-211ENST00000560658 IGHV3-30P01768 117 aa13.07□□□□□ -0.32
TRPM1-211ENST00000560658 IGHV3-30-5P0DP03 117 aa13.07□□□□□ -0.32
TRPM1-211ENST00000560658 HOXD3P31249 432 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 203.4 ms