RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 RAB4BP61018 213 aa9.9□□□□□ -0.83
PKNOX1-209ENST00000560448 HBBP68871 147 aa9.9□□□□□ -0.83
PKNOX1-209ENST00000560448 SLAQ13239 276 aa9.9□□□□□ -0.83
PKNOX1-209ENST00000560448 LINC01559Q495D7 138 aa9.9□□□□□ -0.83
PKNOX1-209ENST00000560448 Q6ZQT7 251 aa9.9□□□□□ -0.83
PKNOX1-209ENST00000560448 C15orf53Q8NAA6 179 aa9.9□□□□□ -0.83
PKNOX1-209ENST00000560448 TRGV2A0A075B6R0 118 aa9.89□□□□□ -0.83
PKNOX1-209ENST00000560448 TRGV1A0A0A0MS02 117 aa9.89□□□□□ -0.83
PKNOX1-209ENST00000560448 LCE6AA0A183 80 aa9.89□□□□□ -0.83
PKNOX1-209ENST00000560448 M0R2P5 195 aa9.89□□□□□ -0.83
PKNOX1-209ENST00000560448 CIDEAO60543 219 aa9.89□□□□□ -0.83
PKNOX1-209ENST00000560448 S100A8P05109 93 aa9.89□□□□□ -0.83
PKNOX1-209ENST00000560448 IGLC6P0CF74 106 aa9.89□□□□□ -0.83
PKNOX1-209ENST00000560448 Q0VG73 95 aa9.89□□□□□ -0.83
PKNOX1-209ENST00000560448 PIK3CD-AS1Q5SR53 167 aa9.89□□□□□ -0.83
PKNOX1-209ENST00000560448 DNLZQ5SXM8 178 aa9.89□□□□□ -0.83
PKNOX1-209ENST00000560448 LINC00518Q8N0U6 118 aa9.89□□□□□ -0.83
PKNOX1-209ENST00000560448 PTH2Q96A98 100 aa9.89□□□□□ -0.83
PKNOX1-209ENST00000560448 MDFICQ9P1T7 246 aa9.89□□□□□ -0.83
PKNOX1-209ENST00000560448 C11orf21Q9P2W6 132 aa9.89□□□□□ -0.83
PKNOX1-209ENST00000560448 A0A1B0GUT8 65 aa9.88□□□□□ -0.83
PKNOX1-209ENST00000560448 GAGE12BA1L429 117 aa9.88□□□□□ -0.83
PKNOX1-209ENST00000560448 H3BNG1 76 aa9.88□□□□□ -0.83
PKNOX1-209ENST00000560448 GAGE7O76087 117 aa9.88□□□□□ -0.83
PKNOX1-209ENST00000560448 ARMS2P0C7Q2 107 aa9.88□□□□□ -0.83
PKNOX1-209ENST00000560448 GAGE12FP0CL80 117 aa9.88□□□□□ -0.83
PKNOX1-209ENST00000560448 GAGE12GP0CL81 117 aa9.88□□□□□ -0.83
PKNOX1-209ENST00000560448 GAGE12IP0CL82 117 aa9.88□□□□□ -0.83
PKNOX1-209ENST00000560448 CAMPP49913 170 aa9.88□□□□□ -0.83
PKNOX1-209ENST00000560448 KIAA1644Q3SXP7 199 aa9.88□□□□□ -0.83
PKNOX1-209ENST00000560448 Q6ZTI0 123 aa9.88□□□□□ -0.83
PKNOX1-209ENST00000560448 TMSB15BA0A087X1C1 80 aa9.87□□□□□ -0.83
PKNOX1-209ENST00000560448 IGKV3D-20A0A0C4DH25 116 aa9.87□□□□□ -0.83
PKNOX1-209ENST00000560448 A0A1B0GW15 77 aa9.87□□□□□ -0.83
PKNOX1-209ENST00000560448 GRIFINA4D1Z8 144 aa9.87□□□□□ -0.83
PKNOX1-209ENST00000560448 CTRLP40313 264 aa9.87□□□□□ -0.83
PKNOX1-209ENST00000560448 LINC00310P59036 64 aa9.87□□□□□ -0.83
PKNOX1-209ENST00000560448 RIGQ13278 110 aa9.87□□□□□ -0.83
PKNOX1-209ENST00000560448 LGALS9CQ6DKI2 356 aa9.87□□□□□ -0.83
PKNOX1-209ENST00000560448 LYZL1Q6UWQ5 148 aa9.87□□□□□ -0.83
PKNOX1-209ENST00000560448 APLNQ9ULZ1 77 aa9.87□□□□□ -0.83
PKNOX1-209ENST00000560448 F5H768 121 aa9.86□□□□□ -0.83
PKNOX1-209ENST00000560448 GNRH2O43555 120 aa9.86□□□□□ -0.83
PKNOX1-209ENST00000560448 NUPR1O60356 82 aa9.86□□□□□ -0.83
PKNOX1-209ENST00000560448 ORM1P02763 201 aa9.86□□□□□ -0.83
PKNOX1-209ENST00000560448 ESDP10768 282 aa9.86□□□□□ -0.83
PKNOX1-209ENST00000560448 HTN3P15516 51 aa9.86□□□□□ -0.83
PKNOX1-209ENST00000560448 S100A4P26447 101 aaKnown RBP9.86□□□□□ -0.83
PKNOX1-209ENST00000560448 ASIPP42127 132 aa9.86□□□□□ -0.83
PKNOX1-209ENST00000560448 PDZD11Q5EBL8 140 aa9.86□□□□□ -0.83
PKNOX1-209ENST00000560448 C9orf85Q96MD7 179 aa9.86□□□□□ -0.83
PKNOX1-209ENST00000560448 HIST1H2BLQ99880 126 aa9.86□□□□□ -0.83
PKNOX1-209ENST00000560448 SSBP4Q9BWG4 385 aaPredicted RBP9.86□□□□□ -0.83
PKNOX1-209ENST00000560448 SRIP30626 198 aa9.85□□□□□ -0.83
PKNOX1-209ENST00000560448 OR10J3Q5JRS4 329 aa9.85□□□□□ -0.83
PKNOX1-209ENST00000560448 LINC00476Q8WZB0 136 aa9.85□□□□□ -0.83
PKNOX1-209ENST00000560448 F2Z2F3 143 aa9.84□□□□□ -0.83
PKNOX1-209ENST00000560448 P0DMU3 169 aa9.84□□□□□ -0.83
PKNOX1-209ENST00000560448 FAM231AP0DMU4 169 aa9.84□□□□□ -0.83
PKNOX1-209ENST00000560448 FAM231CP0DMU5 169 aa9.84□□□□□ -0.83
PKNOX1-209ENST00000560448 MED14OSP0DP75 135 aa9.84□□□□□ -0.83
PKNOX1-209ENST00000560448 FER1L6-AS1Q8NA97 138 aa9.84□□□□□ -0.83
PKNOX1-209ENST00000560448 ALKBH7Q9BT30 221 aaPredicted RBP9.84□□□□□ -0.83
PKNOX1-209ENST00000560448 CNFNQ9BYD5 112 aa9.84□□□□□ -0.83
PKNOX1-209ENST00000560448 MRPL16Q9NX20 251 aaKnown RBP9.84□□□□□ -0.83
PKNOX1-209ENST00000560448 DYNC2H1Q8NCM8 4307 aaKnown RBP9.84□□□□□ -0.83
PKNOX1-209ENST00000560448 TRAV4A0A0B4J268 109 aa9.83□□□□□ -0.84
PKNOX1-209ENST00000560448 RNASE3P12724 160 aaKnown RBP9.83□□□□□ -0.84
PKNOX1-209ENST00000560448 FABP4P15090 132 aa9.83□□□□□ -0.84
PKNOX1-209ENST00000560448 S100A2P29034 98 aa9.83□□□□□ -0.84
PKNOX1-209ENST00000560448 BORCS7Q96B45 105 aa9.83□□□□□ -0.84
PKNOX1-209ENST00000560448 SMIM6P0DI80 62 aa9.82□□□□□ -0.84
PKNOX1-209ENST00000560448 ZNF876PQ49A33 203 aa9.82□□□□□ -0.84
PKNOX1-209ENST00000560448 SYT8Q8NBV8 401 aa9.82□□□□□ -0.84
PKNOX1-209ENST00000560448 OR10D4PQ8NGN7 298 aa9.82□□□□□ -0.84
PKNOX1-209ENST00000560448 C18orf32Q8TCD1 76 aa9.82□□□□□ -0.84
PKNOX1-209ENST00000560448 TPPP3Q9BW30 176 aa9.82□□□□□ -0.84
PKNOX1-209ENST00000560448 PRO0255Q9UI72 69 aa9.82□□□□□ -0.84
PKNOX1-209ENST00000560448 SERF1AO75920 110 aa9.82□□□□□ -0.84
PKNOX1-209ENST00000560448 BAGE3Q86Y29 109 aa9.82□□□□□ -0.84
PKNOX1-209ENST00000560448 RYR3Q15413 4870 aa9.81□□□□□ -0.84
PKNOX1-209ENST00000560448 MUC4Q99102 2169 aa9.81□□□□□ -0.84
PKNOX1-209ENST00000560448 A8MWV9 139 aa9.81□□□□□ -0.84
PKNOX1-209ENST00000560448 OR4C5Q8NGB2 326 aa9.81□□□□□ -0.84
PKNOX1-209ENST00000560448 TMEM18Q96B42 140 aa9.81□□□□□ -0.84
PKNOX1-209ENST00000560448 PACRGQ96M98 296 aaPredicted RBP9.81□□□□□ -0.84
PKNOX1-209ENST00000560448 C12orf57Q99622 126 aa9.81□□□□□ -0.84
PKNOX1-209ENST00000560448 SCRT2Q9NQ03 307 aa9.81□□□□□ -0.84
PKNOX1-209ENST00000560448 TRAV26-1A0A087WT03 109 aa9.8□□□□□ -0.84
PKNOX1-209ENST00000560448 SNAI2O43623 268 aa9.8□□□□□ -0.84
PKNOX1-209ENST00000560448 LY6G6CO95867 125 aa9.8□□□□□ -0.84
PKNOX1-209ENST00000560448 NTF3P20783 257 aa9.8□□□□□ -0.84
PKNOX1-209ENST00000560448 PHLDA3Q9Y5J5 127 aa9.8□□□□□ -0.84
PKNOX1-209ENST00000560448 TENM2Q9NT68 2774 aa9.8□□□□□ -0.84
PKNOX1-209ENST00000560448 TRGV4A0A0C4DH28 118 aa9.79□□□□□ -0.84
PKNOX1-209ENST00000560448 MUC21A0A0G2JKD1 596 aa9.79□□□□□ -0.84
PKNOX1-209ENST00000560448 MUC21A0A140T8X8 626 aa9.79□□□□□ -0.84
PKNOX1-209ENST00000560448 H3BVH4 76 aa9.79□□□□□ -0.84
PKNOX1-209ENST00000560448 OR5AL1P0C617 328 aa9.79□□□□□ -0.84
PKNOX1-209ENST00000560448 IQCJQ1A5X6 159 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms