RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 DYNC1H1Q14204 4646 aaKnown RBP9.61□□□□□ -0.87
SMAD3-214ENST00000560402 TMSB15BA0A087X1C1 80 aa9.61□□□□□ -0.87
SMAD3-214ENST00000560402 LYRM9A8MSI8 78 aa9.61□□□□□ -0.87
SMAD3-214ENST00000560402 M0R2N4 97 aa9.61□□□□□ -0.87
SMAD3-214ENST00000560402 GZMBP10144 247 aa9.61□□□□□ -0.87
SMAD3-214ENST00000560402 TSPOP30536 169 aa9.61□□□□□ -0.87
SMAD3-214ENST00000560402 SRIP30626 198 aa9.61□□□□□ -0.87
SMAD3-214ENST00000560402 CTRLP40313 264 aa9.61□□□□□ -0.87
SMAD3-214ENST00000560402 Q6ZR54 194 aa9.61□□□□□ -0.87
SMAD3-214ENST00000560402 C20orf173Q96LM9 149 aa9.61□□□□□ -0.87
SMAD3-214ENST00000560402 ODF3Q96PU9 254 aa9.61□□□□□ -0.87
SMAD3-214ENST00000560402 GPX1P07203 203 aa9.6□□□□□ -0.87
SMAD3-214ENST00000560402 FABP4P15090 132 aa9.6□□□□□ -0.87
SMAD3-214ENST00000560402 HTN3P15516 51 aa9.6□□□□□ -0.87
SMAD3-214ENST00000560402 PDZD11Q5EBL8 140 aa9.6□□□□□ -0.87
SMAD3-214ENST00000560402 SMIM15Q7Z3B0 74 aa9.6□□□□□ -0.87
SMAD3-214ENST00000560402 LINC00518Q8N0U6 118 aa9.6□□□□□ -0.87
SMAD3-214ENST00000560402 PACRGQ96M98 296 aaPredicted RBP9.6□□□□□ -0.87
SMAD3-214ENST00000560402 PKD1P98161 4303 aa9.6□□□□□ -0.87
SMAD3-214ENST00000560402 GRIFINA4D1Z8 144 aa9.59□□□□□ -0.87
SMAD3-214ENST00000560402 LYZL1Q6UWQ5 148 aa9.59□□□□□ -0.87
SMAD3-214ENST00000560402 GATD1Q8NB37 220 aa9.59□□□□□ -0.87
SMAD3-214ENST00000560402 C12orf57Q99622 126 aa9.59□□□□□ -0.87
SMAD3-214ENST00000560402 SAMD10Q9BYL1 202 aa9.59□□□□□ -0.87
SMAD3-214ENST00000560402 IGLV2-18A0A075B6J9 118 aa9.58□□□□□ -0.88
SMAD3-214ENST00000560402 ARMS2P0C7Q2 107 aa9.58□□□□□ -0.88
SMAD3-214ENST00000560402 PRB4P10163 310 aaPredicted RBP9.58□□□□□ -0.88
SMAD3-214ENST00000560402 ZNF80P51504 273 aaPredicted RBP9.58□□□□□ -0.88
SMAD3-214ENST00000560402 CACNG7P62955 275 aa9.58□□□□□ -0.88
SMAD3-214ENST00000560402 SLAQ13239 276 aa9.58□□□□□ -0.88
SMAD3-214ENST00000560402 SPINK13Q1W4C9 94 aa9.58□□□□□ -0.88
SMAD3-214ENST00000560402 TMEM256Q8N2U0 113 aa9.58□□□□□ -0.88
SMAD3-214ENST00000560402 OR10D4PQ8NGN7 298 aa9.58□□□□□ -0.88
SMAD3-214ENST00000560402 HIST1H2BLQ99880 126 aa9.58□□□□□ -0.88
SMAD3-214ENST00000560402 RYR1P21817 5038 aa9.58□□□□□ -0.88
SMAD3-214ENST00000560402 M0R2Z0 102 aa9.57□□□□□ -0.88
SMAD3-214ENST00000560402 CRXO43186 299 aaPredicted RBP9.57□□□□□ -0.88
SMAD3-214ENST00000560402 IGLC6P0CF74 106 aa9.57□□□□□ -0.88
SMAD3-214ENST00000560402 ESDP10768 282 aa9.57□□□□□ -0.88
SMAD3-214ENST00000560402 KIAA1644Q3SXP7 199 aa9.57□□□□□ -0.88
SMAD3-214ENST00000560402 GFI1BQ5VTD9 330 aa9.57□□□□□ -0.88
SMAD3-214ENST00000560402 DMRTA1Q5VZB9 504 aa9.57□□□□□ -0.88
SMAD3-214ENST00000560402 MUC4Q99102 2169 aa9.56□□□□□ -0.88
SMAD3-214ENST00000560402 ASIPP42127 132 aa9.56□□□□□ -0.88
SMAD3-214ENST00000560402 TWIST1Q15672 202 aa9.56□□□□□ -0.88
SMAD3-214ENST00000560402 C1orf134Q5TEV5 83 aa9.56□□□□□ -0.88
SMAD3-214ENST00000560402 ZNF493Q6ZR52 646 aa9.56□□□□□ -0.88
SMAD3-214ENST00000560402 KCNS1Q96KK3 526 aa9.56□□□□□ -0.88
SMAD3-214ENST00000560402 ALKBH7Q9BT30 221 aaPredicted RBP9.56□□□□□ -0.88
SMAD3-214ENST00000560402 SSBP4Q9BWG4 385 aaPredicted RBP9.56□□□□□ -0.88
SMAD3-214ENST00000560402 SERF1AO75920 110 aa9.55□□□□□ -0.88
SMAD3-214ENST00000560402 S100A4P26447 101 aaKnown RBP9.55□□□□□ -0.88
SMAD3-214ENST00000560402 RNASE4P34096 147 aaKnown RBP9.55□□□□□ -0.88
SMAD3-214ENST00000560402 DNLZQ5SXM8 178 aa9.55□□□□□ -0.88
SMAD3-214ENST00000560402 ZFAND2AQ8N6M9 145 aa9.55□□□□□ -0.88
SMAD3-214ENST00000560402 FAM19A4Q96LR4 140 aa9.55□□□□□ -0.88
SMAD3-214ENST00000560402 CNFNQ9BYD5 112 aa9.55□□□□□ -0.88
SMAD3-214ENST00000560402 NAGKQ9UJ70 344 aa9.55□□□□□ -0.88
SMAD3-214ENST00000560402 HSBP1O75506 76 aa9.54□□□□□ -0.88
SMAD3-214ENST00000560402 ATP5G1P05496 136 aa9.54□□□□□ -0.88
SMAD3-214ENST00000560402 OR5AL1P0C617 328 aa9.54□□□□□ -0.88
SMAD3-214ENST00000560402 FAM159AQ6UWV7 190 aa9.54□□□□□ -0.88
SMAD3-214ENST00000560402 C18orf32Q8TCD1 76 aa9.54□□□□□ -0.88
SMAD3-214ENST00000560402 C16orf74Q96GX8 76 aa9.54□□□□□ -0.88
SMAD3-214ENST00000560402 PLAC8L1A1L4L8 177 aa9.53□□□□□ -0.88
SMAD3-214ENST00000560402 C7orf71A4D174 169 aa9.53□□□□□ -0.88
SMAD3-214ENST00000560402 IFITM10A6NMD0 228 aa9.53□□□□□ -0.88
SMAD3-214ENST00000560402 KLLNB2CW77 178 aa9.53□□□□□ -0.88
SMAD3-214ENST00000560402 J3KRW8 73 aa9.53□□□□□ -0.88
SMAD3-214ENST00000560402 PPBPP02775 128 aa9.53□□□□□ -0.88
SMAD3-214ENST00000560402 DEFB130BP0DP73 79 aa9.53□□□□□ -0.88
SMAD3-214ENST00000560402 DEFB130AP0DP74 79 aa9.53□□□□□ -0.88
SMAD3-214ENST00000560402 RAB4AP20338 218 aa9.53□□□□□ -0.88
SMAD3-214ENST00000560402 CDKN1BP46527 198 aa9.53□□□□□ -0.88
SMAD3-214ENST00000560402 SPANXN1Q5VSR9 72 aa9.53□□□□□ -0.88
SMAD3-214ENST00000560402 CHCHD1Q96BP2 118 aaKnown RBP9.53□□□□□ -0.88
SMAD3-214ENST00000560402 C20orf144Q9BQM9 153 aa9.53□□□□□ -0.88
SMAD3-214ENST00000560402 TMEM191AQ9H0A3 160 aa9.53□□□□□ -0.88
SMAD3-214ENST00000560402 TRAV12-2A0A075B6T6 113 aa9.52□□□□□ -0.89
SMAD3-214ENST00000560402 IGKV3D-20A0A0C4DH25 116 aa9.52□□□□□ -0.89
SMAD3-214ENST00000560402 CBY3A6NI87 242 aa9.52□□□□□ -0.89
SMAD3-214ENST00000560402 F5H768 121 aa9.52□□□□□ -0.89
SMAD3-214ENST00000560402 PMCHP20382 165 aa9.52□□□□□ -0.89
SMAD3-214ENST00000560402 NTF3P20783 257 aa9.52□□□□□ -0.89
SMAD3-214ENST00000560402 AMTP48728 403 aa9.52□□□□□ -0.89
SMAD3-214ENST00000560402 FAM104BQ5XKR9 115 aa9.52□□□□□ -0.89
SMAD3-214ENST00000560402 RNASEKQ6P5S7 137 aaKnown RBP9.52□□□□□ -0.89
SMAD3-214ENST00000560402 ORMDL3Q8N138 153 aa9.52□□□□□ -0.89
SMAD3-214ENST00000560402 TMEM263Q8WUH6 116 aaKnown RBP9.52□□□□□ -0.89
SMAD3-214ENST00000560402 LAMTOR2Q9Y2Q5 125 aa9.52□□□□□ -0.89
SMAD3-214ENST00000560402 TIMM8BQ9Y5J9 83 aaPredicted RBP9.52□□□□□ -0.89
SMAD3-214ENST00000560402 SNAI2O43623 268 aa9.51□□□□□ -0.89
SMAD3-214ENST00000560402 ZNF324O75467 553 aaPredicted RBP9.51□□□□□ -0.89
SMAD3-214ENST00000560402 S100A12P80511 92 aa9.51□□□□□ -0.89
SMAD3-214ENST00000560402 IQCJQ1A5X6 159 aa9.51□□□□□ -0.89
SMAD3-214ENST00000560402 ZNRF2Q8NHG8 242 aa9.51□□□□□ -0.89
SMAD3-214ENST00000560402 LINC01587Q99440 93 aa9.51□□□□□ -0.89
SMAD3-214ENST00000560402 NIT2Q9NQR4 276 aa9.51□□□□□ -0.89
SMAD3-214ENST00000560402 PHLDA3Q9Y5J5 127 aa9.51□□□□□ -0.89
SMAD3-214ENST00000560402 ABCA13Q86UQ4 5058 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms