RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 A8MWV9 139 aa4.65□□□□□ -1.67
SPG11-221ENST00000560299 NXPH4O95158 308 aa4.65□□□□□ -1.67
SPG11-221ENST00000560299 PPBPP02775 128 aa4.65□□□□□ -1.67
SPG11-221ENST00000560299 TRGC2P03986 189 aa4.65□□□□□ -1.67
SPG11-221ENST00000560299 AZU1P20160 251 aa4.65□□□□□ -1.67
SPG11-221ENST00000560299 DAZ2Q13117 558 aaKnown RBP4.65□□□□□ -1.67
SPG11-221ENST00000560299 C11orf72Q8NBR9 251 aa4.65□□□□□ -1.67
SPG11-221ENST00000560299 DPH3P1Q9H4G8 78 aa4.65□□□□□ -1.67
SPG11-221ENST00000560299 MUC4Q99102 2169 aa4.64□□□□□ -1.67
SPG11-221ENST00000560299 TRGV1A0A0A0MS02 117 aa4.64□□□□□ -1.67
SPG11-221ENST00000560299 TEX48A0A1B0GUV7 120 aa4.64□□□□□ -1.67
SPG11-221ENST00000560299 RHODO00212 210 aa4.64□□□□□ -1.67
SPG11-221ENST00000560299 CIDEAO60543 219 aa4.64□□□□□ -1.67
SPG11-221ENST00000560299 PPP1R17O96001 155 aa4.64□□□□□ -1.67
SPG11-221ENST00000560299 EVI2AP22794 236 aa4.64□□□□□ -1.67
SPG11-221ENST00000560299 FAM104BQ5XKR9 115 aa4.64□□□□□ -1.67
SPG11-221ENST00000560299 GATD1Q8NB37 220 aa4.64□□□□□ -1.67
SPG11-221ENST00000560299 MRAPQ8TCY5 172 aa4.64□□□□□ -1.67
SPG11-221ENST00000560299 RASL10AQ92737 203 aa4.64□□□□□ -1.67
SPG11-221ENST00000560299 OVOL2Q9BRP0 275 aa4.64□□□□□ -1.67
SPG11-221ENST00000560299 NOP10Q9NPE3 64 aaKnown RBP4.64□□□□□ -1.67
SPG11-221ENST00000560299 MSRB1Q9NZV6 116 aa4.64□□□□□ -1.67
SPG11-221ENST00000560299 NBEAL2Q6ZNJ1 2754 aa4.63□□□□□ -1.67
SPG11-221ENST00000560299 TRGV2A0A075B6R0 118 aa4.63□□□□□ -1.67
SPG11-221ENST00000560299 LYRM9A8MSI8 78 aa4.63□□□□□ -1.67
SPG11-221ENST00000560299 F5H697 171 aa4.63□□□□□ -1.67
SPG11-221ENST00000560299 H7C1H1 209 aa4.63□□□□□ -1.67
SPG11-221ENST00000560299 PRM2P04554 102 aa4.63□□□□□ -1.67
SPG11-221ENST00000560299 S100A6P06703 90 aa4.63□□□□□ -1.67
SPG11-221ENST00000560299 MGPP08493 103 aa4.63□□□□□ -1.67
SPG11-221ENST00000560299 RAB4AP20338 218 aa4.63□□□□□ -1.67
SPG11-221ENST00000560299 CKS2P33552 79 aa4.63□□□□□ -1.67
SPG11-221ENST00000560299 EMP1P54849 157 aa4.63□□□□□ -1.67
SPG11-221ENST00000560299 AMN1Q8IY45 258 aa4.63□□□□□ -1.67
SPG11-221ENST00000560299 ORMDL3Q8N138 153 aa4.63□□□□□ -1.67
SPG11-221ENST00000560299 C14orf178Q8N769 122 aaPredicted RBP4.63□□□□□ -1.67
SPG11-221ENST00000560299 OR4C5Q8NGB2 326 aa4.63□□□□□ -1.67
SPG11-221ENST00000560299 MRAP2Q96G30 205 aa4.63□□□□□ -1.67
SPG11-221ENST00000560299 SPATA25Q9BR10 227 aa4.63□□□□□ -1.67
SPG11-221ENST00000560299 ZMAT4Q9H898 229 aa4.63□□□□□ -1.67
SPG11-221ENST00000560299 LAMTOR2Q9Y2Q5 125 aa4.63□□□□□ -1.67
SPG11-221ENST00000560299 X6R8D5 127 aa4.63□□□□□ -1.67
SPG11-221ENST00000560299 PRB2P02812 416 aaPredicted RBP4.62□□□□□ -1.67
SPG11-221ENST00000560299 SPART-AS1P0CW21 52 aa4.62□□□□□ -1.67
SPG11-221ENST00000560299 SLAQ13239 276 aa4.62□□□□□ -1.67
SPG11-221ENST00000560299 ZNF56Q15929 161 aa4.62□□□□□ -1.67
SPG11-221ENST00000560299 KIAA1644Q3SXP7 199 aa4.62□□□□□ -1.67
SPG11-221ENST00000560299 FAM74A4Q5TZK3 123 aa4.62□□□□□ -1.67
SPG11-221ENST00000560299 ZFP2Q6ZN57 461 aa4.62□□□□□ -1.67
SPG11-221ENST00000560299 IL17DQ8TAD2 202 aa4.62□□□□□ -1.67
SPG11-221ENST00000560299 TM2D3Q9BRN9 247 aa4.62□□□□□ -1.67
SPG11-221ENST00000560299 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
SPG11-221ENST00000560299 MRPL16Q9NX20 251 aaKnown RBP4.62□□□□□ -1.67
SPG11-221ENST00000560299 HUWE1Q7Z6Z7 4374 aaKnown RBP4.61□□□□□ -1.67
SPG11-221ENST00000560299 A0A087WWL8 130 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 TRAV4A0A0B4J268 109 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 IGHV4-28A0A0C4DH34 117 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 GAGE12BA1L429 117 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 PLAC8L1A1L4L8 177 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 D6R8Y8 96 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 PHOX2AO14813 284 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 RS1O15537 224 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 HIST1H2BKO60814 126 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 GAGE7O76087 117 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 HIST1H2BJP06899 126 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 CRYGDP07320 174 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 GAGE12FP0CL80 117 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 GAGE12GP0CL81 117 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 GAGE12IP0CL82 117 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 HIST1H2BOP23527 126 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 SRIP30626 198 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 HIST1H2BBP33778 126 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 HIST1H2BDP58876 126 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 HIST1H2BCP62807 126 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 HIST2H2BEQ16778 126 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 MRPL51Q4U2R6 128 aaKnown RBP4.61□□□□□ -1.67
SPG11-221ENST00000560299 OR10J3Q5JRS4 329 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.61□□□□□ -1.67
SPG11-221ENST00000560299 CFAP126Q5VTH2 177 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 Q6ZTI0 123 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 HIST1H2BHQ93079 126 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 RNF185Q96GF1 192 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 PRELID3AQ96N28 172 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 HIST1H2BNQ99877 126 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 HIST1H2BMQ99879 126 aa4.61□□□□□ -1.67
SPG11-221ENST00000560299 ALKBH7Q9BT30 221 aaPredicted RBP4.61□□□□□ -1.67
SPG11-221ENST00000560299 TMA7Q9Y2S6 64 aaKnown RBP4.61□□□□□ -1.67
SPG11-221ENST00000560299 TRGV4A0A0C4DH28 118 aa4.6□□□□□ -1.67
SPG11-221ENST00000560299 DEFB130BP0DP73 79 aa4.6□□□□□ -1.67
SPG11-221ENST00000560299 DEFB130AP0DP74 79 aa4.6□□□□□ -1.67
SPG11-221ENST00000560299 DAD1P61803 113 aa4.6□□□□□ -1.67
SPG11-221ENST00000560299 Q0VG73 95 aa4.6□□□□□ -1.67
SPG11-221ENST00000560299 FAM222AQ5U5X8 452 aa4.6□□□□□ -1.67
SPG11-221ENST00000560299 BAGE3Q86Y29 109 aa4.6□□□□□ -1.67
SPG11-221ENST00000560299 SBSPONQ8IVN8 264 aa4.6□□□□□ -1.67
SPG11-221ENST00000560299 POM121L12Q8N7R1 296 aa4.6□□□□□ -1.67
SPG11-221ENST00000560299 Q8NAQ8 132 aa4.6□□□□□ -1.67
SPG11-221ENST00000560299 PRSS3P2Q8NHM4 247 aa4.6□□□□□ -1.67
SPG11-221ENST00000560299 C18orf15Q96N68 181 aa4.6□□□□□ -1.67
SPG11-221ENST00000560299 C11orf68Q9H3H3 251 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms